Opisthorchis viverrini (Southeast Asian liver fluke): T265_07108
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Entry
T265_07108 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ovi03016
]
T265_07108
Enzymes [BR:
ovi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
T265_07108
Transfer RNA biogenesis [BR:
ovi03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
T265_07108
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
20321287
NCBI-ProteinID:
XP_009170815
UniProt:
A0A074ZQ15
LinkDB
All DBs
Position
Unknown
AA seq
731 aa
AA seq
DB search
MDIEDLHTELDVHRTEERNASVKVRFRTRRQNPADADLDSVTTMAIPEHYRVFVQTWGCA
HNTSDSEYMAGLLAQYGYQVILGGSTNAKDSHGPVDAQSNNSECECSSEPADDSCQKRED
KGCCTMPESLTADERAKQEADIWVLNSCTVKGPAEDHFRNAVKAGMRMGKRLVVAGCVPQ
SHPAADYLKGVSIIGVQQIDRVVEVVEETLQGNTVRFLDKKWAVSEDGDSHSARRRLGGA
RLDLPKIRRNPLIEILAVSTGCLNACTYCKTKHARGVLASYPIEELLERAKQAFADGVKE
LWLTSEDLGAYGRDLDRTTSVYSCPSMAVRFPQCLTLADLLSGLVRLIPEGCMLRLGMTN
PPYILEQLREMADVLSHPRVYAFLHVPVQSDCLNCYWVGMTKWLEREFTDRKVRGSNSTP
VFRLSLSRPVQLGSVLALVQPLGGMTVRHRMGATAERLDRRSDAVLDCMKREYTVDEFSH
VVTYLQDHIPPPPLPPDATDDAVNGSGTLTVATDIICGFPNETEADFEETVKLVERFRFP
VLYINQFFARPGTPAASMFRKATTAEVKKRTRRLHDIFRAYKPYEGRQGSLVRVLVTETS
HDGRFWVGHTKAYEQVLVPKIPEVYGRIILVRITECDKFFMRSDIVDPGPLDSLVFQGPL
HTSPTLSTLEPLVKTTCSTAIAQPVVHAVPPSSPKQENTNWVLHLGVVLLVTYIILKICE
MNGYFQRVFVT
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggatattgaggaccttcacactgaactggatgtacatcggactgaagagcggaatgct
tctgtaaaagtccgtttccgaactcgcaggcagaacccagccgatgcggatttggatagt
gttacaacgatggctataccagaacactatcgagttttcgttcagacttggggatgtgct
cacaataccagtgacagcgagtacatggctggtcttctggctcagtacggctatcaggtt
attctgggtggctcgacaaacgcgaaagacagtcacggaccagttgacgcacaatccaac
aactccgagtgtgaatgctcttcagaacctgcagatgattcctgccagaaacgggaagat
aaaggctgttgtacaatgcccgagtccctcactgccgatgaaagggccaaacaagaagca
gatatatgggttttgaacagttgtacagtcaaaggtcctgctgaggatcacttccgtaat
gctgtaaaggccgggatgcggatgggcaagcggttagttgtggccggttgtgttccccaa
agtcatcccgcagcagactatctgaaaggtgtcagtatcattggagtccagcaaatcgac
cgcgtagtagaagtagtggaagaaacgttacaaggcaacactgttcgtttcctggacaag
aaatgggcagtatctgaagatggagactctcactcagcacgacgccgccttggtggcgct
cgacttgaccttccaaagattcggcgaaatcctctgattgaaatcttagctgtcagcacc
ggttgcctgaacgcctgcacctactgcaagacgaaacacgcacggggtgtgctggcgagt
tatcccattgaggagctgctggaacgggctaaacaagcatttgctgatggcgttaaggaa
ttgtggctgacctcagaagatcttggtgcctacggtcgtgacttggatcggacaacatcg
gtttattcgtgtccctccatggctgttcggtttccgcagtgtctcacactggctgatctc
ctttctggactggtgagattgataccggagggttgtatgctccgcttgggtatgacgaat
ccgccttacattctggagcagttgcgagaaatggcagacgtgttgtcacatccgcgcgtc
tatgcatttctgcacgtcccggttcagtctgattgtctgaactgttactgggtcggtatg
accaagtggttagagcgcgaatttactgaccggaaggtccgtggttcgaactcgacccct
gtctttcgactttctctgtctaggcctgtgcaacttggcagtgtcctagccctcgtgcag
cctttgggcggcatgacagttaggcaccgaatgggtgctacagctgaacgattagatagg
cgctcggatgctgtgttggattgcatgaaacgagagtacacagttgacgaattcagtcac
gtggtcacgtacctccaagaccacatcccacctcctcccctaccacctgatgcaactgac
gatgctgtcaatggatcgggtacactgacggttgcgaccgatataatttgtgggtttccc
aatgaaacggaagccgatttcgaggaaaccgtcaagctggtcgagcgattccgctttcca
gtcctatacatcaatcagttctttgcccggcccggcaccccagcggcaagcatgttcagg
aaagcaacaacagcggaagtcaagaaacggactagacggcttcatgacatatttcgtgcc
tacaaaccctatgagggtcgtcaaggttcgttggttcgcgttttggtcacggaaaccagt
catgatggacggttctgggtagggcacaccaaagcctatgaacaggtccttgtaccgaaa
attcccgaagtttatggtcgtatcatccttgtccgcattaccgaatgcgacaaattcttc
atgcgctctgacattgttgatcctggacctttggactcgttggttttccaaggtcctctg
cacacgtcaccgaccctctctactttggaaccgttagtaaaaacgacatgctcaaccgcg
attgcccaacccgttgtgcatgcggtcccgccaagttcaccgaagcaggaaaacactaac
tgggtacttcacctcggagttgttctgctggtaacctatattatactcaaaatttgcgaa
atgaatggctactttcagcgagtcttcgtgacatag
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