KEGG   Opisthorchis viverrini (Southeast Asian liver fluke): T265_07341
Entry
T265_07341        CDS       T04902                                 
Name
(RefSeq) hypothetical protein
  KO
K11097  small nuclear ribonucleoprotein E
Organism
ovi  Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ovi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    T265_07341
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ovi03019]
    T265_07341
   03041 Spliceosome [BR:ovi03041]
    T265_07341
   03032 DNA replication proteins [BR:ovi03032]
    T265_07341
Messenger RNA biogenesis [BR:ovi03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     T265_07341
Spliceosome [BR:ovi03041]
 Complex A
  U1 snRNP components
   Sm proteins
    T265_07341
  U2 snRNP components
    T265_07341
 Complex B
  U1 snRNP components
    T265_07341
  U4/U6.U5 tri-snRNP components
    T265_07341
 Complex C
  U2 snRNP components
    T265_07341
DNA replication proteins [BR:ovi03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     T265_07341
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 20321520
NCBI-ProteinID: XP_009171104
UniProt: A0A074ZP55
LinkDB
Position
Unknown
AA seq 86 aa
MIRRAFSHITRIDFHSVYRVYQSKARVQIWLYEQTNLRIEGIIIGFDEYMNLVLGDACER
HMKSGAKRPLGRILLKGETITLVQAC
NT seq 261 nt   +upstreamnt  +downstreamnt
atgatccgacgcgccttctcccatatcactcgcattgacttccactctgtgtaccgtgtg
tatcaatccaaagcgcgggtgcaaatatggctttatgaacaaacaaatcttcggatcgag
ggcattataatcggcttcgacgaatatatgaacctggtacttggtgatgcttgcgaacgt
catatgaagtccggtgccaaacgaccacttggtcgtattcttttgaagggagagaccatc
acacttgtacaagcctgttaa

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