KEGG   Opisthorchis viverrini (Southeast Asian liver fluke): T265_07566
Entry
T265_07566        CDS       T04902                                 
Name
(RefSeq) hypothetical protein
  KO
K15361  WD repeat-containing protein 48
Organism
ovi  Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ovi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    T265_07566
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ovi03400]
    T265_07566
DNA repair and recombination proteins [BR:ovi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     T265_07566
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz DUF3337 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_TEP1_C Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_SCAP ANAPC4_WD40 NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_DCAF12 WD_LRWD1 Beta-prop_DCAF4 Beta-prop_Vps41 RAWUL
Other DBs
NCBI-GeneID: 20321745
NCBI-ProteinID: XP_009171387
UniProt: A0A074ZNB8
LinkDB
Position
Unknown
AA seq 898 aa
MCFLPNCIYHTLSLPDALVTCGITPNQCAIFGMVNRKKIQLSFFMRDEVEPRNRSGVNAL
QYDVHNDRLFTAGRDSVIRIWNAQKPKDSLMQCMEHHADWVNDIVLCCDGKNLEPRNRSG
VNALQYDVHNDRLFTAGRDSVIRIWNAQKPKDSLMQCMEHHADWVNDIVLCCDGKNLISA
SNDTTVKVWNATKGFCMSTLRTHKDYVRVLAYAQHREEVASAGLDHAIFLWDVRTLTALT
PTNNTVTTSSFTDKKESIYSLAMNPSGTVLVSGSPDKLIRVWDPRACHKLFQLRGHAGNV
RALIVRPDGQEVISASSDGTIRIWSLGMQCCTDTIRVHSQGVFTIQVNEALCSAGTDRNI
WATDLSNPNRSVLLGEESDPVLRLLLVETPSKSCLWTSTCNSNVNRWPISPSGMTQRGSV
ESRSFSSNYDPRESNPPGPALSTSNPSVREPIHQHALRGPSTDTSHLHKMEMLKPDLTIH
GGTSVIQYHVCSEKRFVLTKDTDANVAARLVEKLGVVDFENEIKKREKFIYVPNWFTVDL
KCGMPIIHLDETDGLSANITLADACLLDEFEQCDASDSPSPDTKVNYGVLLLRSLFARWP
KANAFANLENARHDPLTYKVLGVPDHTPVILSEGTGRALIRFLVRDAAPLNEQLMICDSV
PDWIRDIVVDRRMPKSTRIEFFLLPGVREYNEKGQCKIVPLVSMKRDCLSASDILLIRKV
MDYVYQRLVKLAEAWTDTNAATTGTNAMPSPSSGRNAGTLSSYASGDRFGQASSVSSRHM
LVNHMLHLFMPPGMQAGDSRAATRSPASAYSPTGSSADPRVPPMAPLDLPPETFHADLAV
IAEVAASSNPNPEDIVEIWCGDQYLDPNMNLRSARHFCWKQSGYLQLTYMVRHEKLSS
NT seq 2697 nt   +upstreamnt  +downstreamnt
atgtgcttcctgcccaattgtatttatcacactctctcccttcctgacgctcttgttact
tgcggcataacgccaaaccaatgtgcaattttcggcatggtgaatcggaagaaaattcag
ctgtcctttttcatgcgtgatgaagttgaaccgaggaatcggtcgggtgtgaatgctctg
cagtatgatgtacataacgaccgcctattcaccgccggtcgggactccgtgatccggatt
tggaatgcacaaaagccgaaggattcactgatgcaatgcatggaacatcatgctgattgg
gtgaatgacattgtgttatgttgtgatgggaagaaccttgaaccgaggaatcggtcgggt
gtgaatgctctgcagtatgatgtacataacgaccgcctattcaccgccggtcgggactcc
gtgatccggatttggaatgcacaaaagccgaaggattcactgatgcaatgcatggaacat
catgctgattgggtgaatgacattgtgttatgttgtgatgggaagaacctcatctccgca
tcaaacgacacaacagtcaaagtttggaatgccaccaagggcttttgtatgtccacgttg
cggactcacaaggattatgttcgtgtgcttgcttatgctcagcatcgtgaagaggttgcc
agtgctggtttggatcatgcaatttttctgtgggacgttcggaccctcacagccctaaca
ccgacaaataatacagtaacaacgtcgtcgttcactgacaaaaaggagagtatttatagc
ttggctatgaatccttctggaaccgtgctcgtttccggtagtcctgacaagttaattcga
gtttgggatccccgagcttgtcacaagctattccaactgcgtggtcacgctggaaatgtc
cgcgctctcatcgtccgacctgatggccaagaggttattagtgcaagttccgatggaacc
atccgcatatggtctctgggaatgcagtgctgcacggacactattcgcgtccactctcag
ggtgttttcacaatccaggtcaatgaagctttgtgttcggctggtacggatcggaacatt
tgggccacagatctgtcaaatccgaatcgatctgtgctgcttggagaagagtctgatcct
gtgcttcgacttttgctcgtcgaaaccccttctaaatcttgcctgtggacttcgacgtgt
aattcgaacgtgaacagatggccaatttccccatctggcatgactcagcgcggctctgtg
gagtcgcgaagtttttccagcaactatgatcctcgagagtctaatccacctggtccggct
ttgtccacttcaaatccttctgttcgtgagccgattcatcagcatgcactcagggggcct
tcaacggataccagtcatttgcataaaatggaaatgttgaagccagatcttacgatccac
ggcggcacttctgttatccagtatcacgtgtgctcagaaaaacgcttcgtccttaccaag
gatacggacgctaacgtggctgcccgtcttgtagagaagttgggtgtcgtggacttcgaa
aatgagatcaagaagcgcgaaaaattcatctacgttccaaactggttcacagttgacctc
aagtgtggaatgccgattatccatttggatgagacagatggcctctcggccaacataact
ctcgctgatgcctgccttcttgatgagttcgaacagtgcgatgcgtcggatagcccaagt
ccggacactaaagtaaattatggcgtcctacttcttcgttctctctttgcccgttggcca
aaagcaaacgccttcgctaatttagaaaacgcccgacatgacccactgacgtacaaggtt
ctcggcgtgcctgatcacactccagtgattttaagcgagggaactggacgtgctcttata
cgcttcttagtacgtgacgcggctccactaaatgaacaactgatgatttgtgactccgtg
ccggactggatacgtgatattgttgtggacagacggatgccgaaatcaactcgtattgaa
tttttcctgctcccgggggtgcgtgagtacaacgagaaaggccagtgcaagatcgtgccg
cttgtgtcgatgaaacgcgactgtctttcagcgagtgatattctactgattcgtaaagtg
atggactacgtttatcaacggctcgtcaaattagccgaagcatggaccgatacgaatgca
gctaccaccggcactaatgcaatgcctagtccttcttctggccgcaatgcaggaacctta
tcgtcttatgccagtggggatcgatttggtcaagcatccagtgtgtcatccaggcacatg
ctagtcaaccatatgctccatttattcatgccccctggaatgcaagctggggattcacgt
gctgccactcgttcacccgcttctgcttattcgcccacaggaagctctgccgatcctcga
gttccccccatggctcctttggacttaccgccagaaacatttcacgctgacctcgctgta
attgctgaggttgccgcatccagtaatccgaacccggaagatatcgtggagatatggtgt
ggtgatcaatacttggacccgaacatgaatctccgtagtgcgcggcacttttgctggaaa
cagtcaggctatttacagctcacctatatggtccgccatgagaaactctcttcctga

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