Opisthorchis viverrini (Southeast Asian liver fluke): T265_07644
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Entry
T265_07644 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
T265_07644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovi03019
]
T265_07644
Messenger RNA biogenesis [BR:
ovi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
T265_07644
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
20321823
NCBI-ProteinID:
XP_009171481
UniProt:
A0A074ZBT4
LinkDB
All DBs
Position
Unknown
AA seq
374 aa
AA seq
DB search
MSDLATINLDITQKVSNECLEKIQETDKTELCEEIFKYSPKDDDADKVECSLRCVLNRNT
RAAAIVELSRYLHTIPRLGLIIYGRSAVLSSILMEIMEHYPNGAKHAELQQESVDVICGI
VAIFQKIILDRAVRLEFLKTDILLFLLPYLNRTEQTREIEQLRVSLLGLFATATSKVSVE
TMERLLLRLPTNQGGSAEVPTDAGLYDYTVAALCYSTSDIGKTMALILLTRLLASTRQLT
MLGQDNQRIQKLVAGLNYIIKYVAKKFNPCNGLSPLRRGVHSMADVHAINWEKAKRLLRF
AFGCLYKVTSEPHIRLELVTSLPDELRSRLFTRIFDNEVDGWLEGLWDRLNMEPPLRVSD
GCCELPVADERCRT
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatctggcaaccataaatttagacatcactcaaaaagtttcaaatgaatgcctg
gaaaagatacaagagacagataagacggagctatgtgaggaaatattcaagtacagcccc
aaagatgatgatgccgataaagttgagtgctcattgcgctgtgtcttaaatcgtaacacg
cgtgcggctgccatcgtggaactatctcggtacctgcacaccattcctcgcttgggactc
atcatttacggacgttccgctgtcctttcctctatccttatggagatcatggaacactac
cccaacggtgcgaaacatgcggaactccaacaagaatctgttgatgttatctgcggtatt
gtcgccatatttcagaagattatactggatcgtgcggttcggctagaattcctcaagacc
gacatactcctctttctgcttccctatctgaaccggactgagcagacacgagagatcgaa
caactgagggttagtctgttgggcttgtttgccactgccactagtaaggtgtctgtcgaa
acaatggaacgcctactgcttcgtttacctacaaatcagggtggatcagctgaagtgcct
acggatgccgggctatacgactacactgtggctgctttgtgctatagtacttcggatatt
ggaaagacaatggcactgatccttctcacacggctcttggcatccaccagacagctgaca
atgcttgggcaggacaaccagcgtattcagaaacttgtggctggtttgaattacatcatc
aaatatgtggccaaaaagtttaacccctgcaacggtctgtcaccacttcgaaggggtgtg
cacagcatggcggatgtgcatgcgataaattgggaaaaagctaagaggctacttcggttc
gctttcggttgcctgtataaggtcaccagtgaacctcacatacgcctcgagctcgttaca
agtttaccagatgaactacggagcagattgtttaccagaatatttgataatgaggttgac
ggctggctggagggattgtgggaccgactgaatatggaaccaccgctgagggtatcagac
ggctgttgtgaactgcctgtcgcggatgagaggtgccgtacgtag
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