Opisthorchis viverrini (Southeast Asian liver fluke): T265_08579
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Entry
T265_08579 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
T265_08579
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ovi00536
]
T265_08579
Glycosaminoglycan binding proteins [BR:
ovi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
T265_08579
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
20322758
NCBI-ProteinID:
XP_009172688
UniProt:
A0A074ZJQ5
LinkDB
All DBs
Position
Unknown
AA seq
1648 aa
AA seq
DB search
MNFVTHFTSCLRNIHSTIPGRMQLLIFSLLILYSRSVHSQSPDSTEVAYDLLKAVTIDSA
APTDVTRQPGFCPPADGNQNTAYSYHRGGQLHIEADRVFPATFPRDFSILATVRLKTATE
GELFELVDPEGKRRLAVTLGPTITLDYYGEGQMRKVRFMQSLVPYRWYRISLSIKGDAVT
LLVNCRVVQSQMLVRSPSDPTGLESGTLYVMQHKDGKASFTGVVDRLLIIPTPEGAYNHC
TTFSPCEKSNSFYDSMQAEEVETTEWQYGIPGAPGEKGEPGLKGEKGQPGRDGRSGIPGS
PGSPGVPSHILVMPLPSFGKNELSRMASFRTMVQQSVMMLKGSRGQQGMTGLPGIQGPPG
YVGEKGEQGHTGDPGFMGPSGLQGPPGPSGPRGRPGLDGEVGASGLSGSKGQPGLPGPPG
LPGPMGHKGDVGPQGNKGDIGPRGPVGPRGRTGEVGPVGEPGPPGLQGPMGPPGPPGVRG
LPGSMGPGGMKGEMGDVGIMGPPGPRGPVGPPGMLGPQGPRGLTGLPGLRGPPGERGPQG
SPGLPGNPGQQGNVGLKGEPGAPGLVGDSGPLGPLGYKGDRGPRGLIGPKGDQGAPGKTG
VRGERGEKGAKGEPGNAGPRGSDGPLGSKGENGMPGEPGSRGMEGPKGNQGGRGAAGFVG
SQGPKGAVGPAGPIGRTGEKGDPGPIGPLGPRGPVGPPGAPGPRGAPGPSGPTGMKGDEG
PVGPTGPIGPVGPQGSRGLPGFVGGAGPVGLPGRPGPPGYVGDRGEPGEPGLPGEIGPVG
MVGAPGQTGEQGAVGERGLAGPRGPQGNPGRPGVEGFEGPQGDKGDVGPIGPTGPSGPVG
LRGSPGPVGPSGEVGPKGDQGRPGMQGSIGDKGDRGPHGPQGPPGVVGPTGPQGLPGSPG
EPGSKGARGQPGPIGVRGEKGIRGLVGKPGAHGPTGVDGEMGDIGSPGPQGSKGDRGDRG
EEGLPGPTGDIGATGPQGAPGESGEPGPAGVAGPKGIEGKAGPPGPEGPVGVQGSPGPNG
PRGEPGTKGLPGPDGHPGEVGPPGISGSPGKVGNPGPSGTPGVKGPKGEPGLLGSRGLQG
IPGKPGPDGPQGPKGTRGRPGRQGRPGPAGPPGIAGHPGLQGTPGPQGPLGPPGDVGPQG
SAGLPGRDGGRGIMGPDGAVGEDGPPGPPGPAGTPGPQGPVGSAGETGHVGDPGSRGPPG
PFGPDGEPGLPGPPGPEGPVGPSGPPGEQGLQGPVGQPGTKGNPGKPGSTGPVGNPGDQG
LKGVKGNPGTVGPTGPQGEQGSIGDPGPPGETGEVGGEGDIGPQGPRGPTGDDGEPGPQG
RQGPAGPPGQKGPRGKPGQPGEPGPMGRPGPQGQVKVTNAPENGLRRVRRSVNPVREQTL
EDINARIFQRVDTLYKRAKLARHPQGTRIKYPARTCKDIRLVNKFAKNDTQVISYWIDPN
EGISGDTIKVQCVFYDDGRVETCVESTMDQGMLTTYMKPHAGDSEWQSQLRVMNSTKPPN
LHDYGDHSQVNMLRIQHRRASQELEFLCDGTAIYGRWDPKLSEPKFDVATALLAHNGRML
DLGSGERLGFGLEHMDKRIYRNTLDRIDTSITVEYDGCQYMNRGAATKIRVETTDLEVLP
VIDFKVRSFDQSGLSSLSLNVGSVCYQI
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgtcacgcattttaccagctgcttaaggaacattcatagcactattccagga
agaatgcagctgttgattttctccttgctgatactgtactcgagatccgtccactctcag
tcgcccgattcaaccgaggtcgcttacgaccttctcaaagccgtcacaatagactcggcc
gctcccacggatgttacacgtcagccaggattctgtccgccggcagatggtaaccagaac
acagcctactcctaccacagaggaggtcagctccacattgaagcggacagagtttttcca
gccacatttcccagagatttttcaattctggccactgtccgactcaagactgccacagaa
ggcgagttgttcgaattggttgatccggaaggaaaaaggcgactggctgtgaccttggga
cctacaatcactctggattactatggcgagggacaaatgcgaaaggtccgattcatgcag
tctctcgtaccatacagatggtaccggatctcacttagcatcaagggagacgcagtcaca
ctgttggttaactgccgcgttgttcagtctcagatgctggtcaggagcccttcggacccg
acaggtcttgagagtgggacgctatatgtgatgcagcataaggatggaaaggcaagcttc
acgggtgttgtcgaccgactcctgattatccccactccagaaggcgcctacaatcactgc
accaccttttctccatgcgaaaaatccaactcgttttacgattccatgcaagctgaagaa
gtcgagaccacagagtggcaatatggaatccccggagcgcctggtgaaaagggagaaccc
ggtctcaagggagagaaaggtcaaccgggacgtgacggaagaagcgggatcccgggaagt
cctggatctcccggcgtaccaagtcacatactggttatgccactgccgagctttggtaaa
aacgaattatctcgaatggccagcttccgaacgatggttcaacagtctgtgatgatgttg
aagggcagtcgtggacagcaaggaatgactggtcttcccggtatccaaggacctcctggc
tatgttggcgaaaagggcgagcaaggtcacactggagatcccggattcatgggtccctcg
ggtttacaaggtcctccgggaccaagtggtccacgaggacgaccaggattggatggtgag
gttggagcgagcggactctcggggagcaaaggacaacctgggcttccagggcccccagga
ctgcccggacccatgggacacaaaggtgatgtgggaccgcagggtaacaagggagatatt
ggtccccgcggtcccgttggcccacgaggcaggactggtgaagttggaccggttggtgaa
ccaggaccccccggattacagggtcccatggggcctcccggaccaccgggagttcgcgga
ttgccagggagcatgggtcctggcggaatgaaaggcgaaatgggtgatgttggtattatg
ggaccccctggccctcgaggcccagtcggccccccaggtatgctcggacctcagggccct
agaggcctcacaggtttacccggactaagagggccacccggtgaacgtggtcctcaggga
agccctggtttgcctgggaatcctggacaacaaggaaacgttgggcttaagggtgaaccg
ggagcgccagggctggttggtgacagtggtcctctcggtcctctggggtacaaaggcgat
cgtgggccacgtgggctcattggaccaaaaggagaccagggcgcacctggaaaaacgggt
gtacgaggtgaacgaggagaaaaaggagccaagggcgaaccaggaaacgcggggccccga
ggaagtgatggcccccttgggagtaagggagaaaatggaatgcctggagagccggggtcg
aggggtatggaaggtccaaagggcaatcaaggtgggcgtggtgctgctggttttgttgga
tcacaggggcccaaaggtgcagttggtccagctgggcccatcggtcgtactggggagaag
ggtgatcctggtccgataggtcctcttggacctcgtgggcctgttggcccacccggtgcg
cctggaccacgaggagctcctggaccgtcaggcccaacgggaatgaaaggagatgaaggc
ccggtagggccgaccggaccaataggtccagttggacctcagggttcaagagggcttccc
ggatttgtcgggggtgctgggcctgtgggcttgcctggacgtcctggacccccgggttat
gtgggcgaccgtggagagcccggtgaacctggccttcctggagaaatcggccccgtgggt
atggttggagcaccaggtcaaactggggagcagggagctgtcggagaacgtggattagct
ggccctcgtggtccacaaggaaaccctgggagaccaggtgtagaaggttttgaaggaccc
cagggcgacaaaggggatgttggtccaatcggcccgaccggtccgagtggtccggtcggt
cttcgtggcagtccgggtcccgttggtccatcgggtgaagtcggtcctaagggagaccaa
ggacgacccggaatgcaaggaagcataggagacaaaggtgaccggggtccccatggacct
caaggtccacccggagttgttgggcccacaggaccacaaggtttgcctgggagtcccgga
gagcctggatcgaaaggagcacgtggtcaacccgggccgattggcgttcgtggggaaaaa
gggattcgtggtctggtcggtaaaccgggcgcccatggtcccaccggggtggacggtgag
atgggtgatattgggagcccgggaccgcagggttcaaagggcgatcgcggagatcgggga
gaagaaggtcttccaggtccaacaggagatatcggtgccaccgggcctcagggagctcct
ggagagtctggtgaacccggaccagccggtgtggcaggaccaaaaggaattgagggaaaa
gctggccctcctggacccgaaggcccggtaggagttcagggttctcctgggccaaatgga
ccacgaggggagcctgggaccaagggtttgcctggtccggacgggcatcctggtgaagtg
ggtcctcccggtatctcaggttctcctggaaaggttggtaatccaggtccaagtggaacc
cctggtgtcaaaggtccaaaaggagaaccgggtctccttgggtcacgcggtttgcaagga
atacctggaaagcctggaccggatggccctcaaggacctaaaggtacccgaggcagacct
ggtcgtcaaggtcgacctggacctgccggtccgcctggtattgccggtcatcccgggctg
caaggtacacccggccctcaaggccctctgggtcctcccggtgatgttggccctcaagga
agcgctggtctcccgggaagagacggtggtcgaggaatcatgggtccagatggtgcagta
ggagaggatggacctccgggaccaccgggtccggccggtacacccgggccacaaggtcca
gtaggatccgctggtgaaactggacacgtcggtgatccaggaagccgtggccctcccggt
cctttcggacccgatggggaacctgggcttcctggacctccaggcccagagggacctgtg
ggaccaagtgggccgcccggtgaacagggtctgcaaggccctgtcggtcaacctggaact
aaaggaaatcctgggaaaccagggagcacgggacctgttggcaatcctggtgaccaagga
ctgaaaggagtcaaaggaaatcctggtaccgttggtccaaccggacctcaaggggagcaa
ggtagtattggtgacccaggaccacctggagagacaggagaggttggaggtgaaggagat
atcggtcctcaagggcctcgtggacctactggggatgatggagaaccgggacctcagggt
cgtcaaggtcctgcaggccctccaggacagaagggccctcgtggaaaacccggccaacct
ggagagcccggaccaatgggcagaccaggtccacaaggacaagtcaaggtcactaatgca
cctgaaaacggcctacgcagggtgagaaggtcggttaacccggttcgcgaacaaacgctg
gaggatatcaatgccaggatattccaacgggttgacacactgtacaagagagccaagctc
gctcgtcacccacagggaacgaggatcaagtaccctgcacgcacctgcaaagacatccga
ctggtcaacaaatttgccaaaaacgatacgcaagttatttcttactggattgatccaaac
gaaggaatcagtggtgacacaatcaaagttcagtgtgtattctacgacgatggtcgagtt
gagacatgcgtagagtctacaatggatcagggtatgctaaccacctacatgaaaccccac
gccggcgatagcgagtggcagagccagttgcgtgtgatgaactcaacgaaacccccgaat
ctacatgactatggagatcattctcaagtcaacatgcttcgcattcaacaccgacgagcc
tctcaagaattggagttcctatgtgacggcaccgcaatctacggtcgttgggatcccaag
ctctccgaaccgaagtttgacgttgctaccgccttgttggcacacaacggtcgaatgctc
gacttgggcagcggagagcgtctcgggtttggactggaacatatggacaagcgaatttat
cggaacacactggacagaattgatactagtattacagtggagtatgacggctgccagtac
atgaatcgcggagcggccacgaagattcgagtggaaactacggatctcgaagtactgcct
gttatcgacttcaaggtgcgcagcttcgatcaatccggcctcagctcgttgagtctgaac
gtcggctctgtatgttatcaaatctag
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integrated database retrieval system
