Opisthorchis viverrini (Southeast Asian liver fluke): T265_08929
Help
Entry
T265_08929 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03440
Homologous recombination
ovi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
T265_08929
03460 Fanconi anemia pathway
T265_08929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ovi03032
]
T265_08929
03400 DNA repair and recombination proteins [BR:
ovi03400
]
T265_08929
Enzymes [BR:
ovi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
T265_08929
DNA replication proteins [BR:
ovi03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
T265_08929
DNA repair and recombination proteins [BR:
ovi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
T265_08929
Bloom's syndrome complex (BTR)
T265_08929
FA (Fanconi anemia) pathway
T265_08929
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
RecQ_Zn_bind
HRDC
ResIII
Motif
Other DBs
NCBI-GeneID:
20323108
NCBI-ProteinID:
XP_009173132
UniProt:
A0A074Z7F7
LinkDB
All DBs
Position
Unknown
AA seq
1139 aa
AA seq
DB search
MRDTARSPLCLVGDAARYGEKSSLCDARHRAIPAMPGWRRRKIWLLVDVCHVLVVSFYPD
FPNGCRSDYGRLTLNEPPSPSWFDEVEQSSLLNDHPVPSPLGNSSRATSSSDWLHPTPNS
CVQADILTVVPSTGAVSAVTTTPFAPLPSDERSPCVEVAKTPALGQDWSTLSDVQSSSDH
VVITRRLYELMQNVCDAIESLPMNKLLACFGDNLTTISQFLHERNNKGMEPTSATANYTF
VDPITSPIRPSRMEPKKPSTPSTLREAMASACKPTTPINQARLPPTSSSISRTEDSWGDF
DFGESIIKTTRKPVQSVPGESVEKLPKPPQTTHLVEATRPVLHADTGEGGVFLPLSTTFS
KWEAPVSASHRDDHPDDGSTGEFDGTDKFPHSEKVMEAFSKLFGLKSFRRNQLQAINAAL
LGLDCFVIMPTGGGKSLCYQLPAAVQDGLTLVISPLKALVLDQVTKMQSLGIVAAHLTGE
ATMTESDRVYASLHLATLRTKLLYVTPEKIAASDKLKGCLEQLYRRNLLQRFVIDEAHCV
SQWGHDFRPDYRNLSILRTNFPKVPMMAMTATATPRVREDILHQLKMKNTKWFIQSFNRT
NLKFEVRPKKVKSCTKEIIEVIHSEFPRRSGIVYCLSRRECDLVAEELSRAGLAASAYHA
GMTDAQRRRIQEAWIQEDKCKIVCATIAFGMGIDKPDVRFVIHHSLPKSIEGYYQEAGRS
GRDGLPATCILYYHWHDVVRLRKLIQGDTPGSNTFANIQLHEEALFRMVSYCENQIDCRR
RQILSHFGEAFDAADCGLVVGCMCDNCQQADRRRLEQRDVTEDAVLIVRAVDGFVRSRRN
VTINYCVDVFRGAQTSQIQRAQDNLNPLYNRGASYSKTDAERLFHRLVAESVLYEELTVT
HQDHVVAYVRPGSKAVRLLEGSLKIHLPISMPSRPGAAEAKMIGREPEDRYAKIRNECYE
ELVQVAKQLTSEQGISNYATVFPNEMLLEMAAHLPTTREELLQVPQCTEYKLNRFNAQDR
FLEITLNYLSILGALKSEEQQQEAQLTSAAPDFATFPSRSQWNSTKPRGRSKKASSHYFK
RGGGKASYLFGKYQNKATARNSQQQSSTSTNGWKRKAPEPLPTTNAFQPKLMKLSVKRE
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgcgagacaccgcgcgatccccgctatgcctggttggagacgccgcaagatatggcgaa
aagtcgagtctttgcgatgcgagacaccgcgcgatccccgctatgcctggttggagacgc
cgcaagatatggctgctagtcgatgtctgtcacgttcttgttgtcagtttctatccggat
ttcccgaatgggtgtcggagtgattatggtagactaacactaaacgaacctccatctcct
tcgtggtttgatgaagtcgagcaatcttctcttttgaatgatcaccccgttccatctcca
ctgggcaactccagtcgagcaacgagttcctccgattggctccatccaacccccaattct
tgtgttcaggcagatatcctgactgttgttccttcaacaggtgctgtctctgcagtcacg
actacccctttcgctcctctaccatctgatgaaagatctccatgcgttgaagttgctaaa
actcctgccctaggacaagattggtcgaccttatcagatgtacagtcatcttcagaccat
gtagtgattactaggcgactgtatgaattaatgcaaaatgtttgtgatgccatcgaatcc
ctccccatgaataagcttctcgcctgctttggagacaatcttacaacaattagtcagttt
cttcatgagcgaaataacaaaggaatggaaccaacgagtgcgacagctaactatacattt
gtggatccaatcacatccccgatcagacccagtcgaatggaacctaaaaaaccatccacc
ccctctacactccgtgaagcaatggcatcagcttgcaaacccacaactccaatcaaccag
gctcgactaccgcctactagttcttcgatttcacgtactgaggacagctggggcgatttc
gatttcggcgaaagtattattaaaaccactcggaaaccagttcagtctgtgcctggtgaa
tcggtcgagaagcttccaaagccaccacaaacaacccatttagttgaagccacaagacca
gtcctacatgcagatactggtgaaggtggtgtttttctccctttgtccaccacattttct
aagtgggaggcaccagtttctgcatcgcaccgagatgatcatccggatgatggttctaca
ggagagttcgatggcacggataaatttccccattctgagaaggtgatggaggcgtttagc
aagttatttgggttgaagtcctttcgtcgcaaccagctccaggccatcaacgctgctttg
cttggtctcgattgctttgtcatcatgcctacaggtggtggaaaaagtttgtgctaccag
ttgccggctgctgtccaagatgggttgactttggtgatttctcccctgaaagcactggtt
ttggatcaagtaaccaagatgcagtctctcgggattgttgctgcacatttgacgggggaa
gcaaccatgaccgaatccgatcgagtgtatgcttcgctacacttggccacgctacgcaca
aaactgttgtacgtcacccctgaaaagatagccgcttcggataaactgaagggttgtttg
gagcaactataccgacgtaacttactacagcggttcgtgatcgatgaggcacactgtgtg
agccagtggggtcatgattttcgaccggactaccgtaatctcagcatccttcgtaccaat
ttcccgaaagtaccaatgatggccatgacagctaccgccactcccagagtacgggaagac
atattacatcaactcaaaatgaaaaacaccaaatggttcattcaaagcttcaatcggaca
aacctcaagttcgaagttcggccgaaaaaggtcaagagttgcacgaaggagatcattgaa
gtcatccattcggaattccctagacgatcgggcatagtttactgcctctcccgccgtgaa
tgtgacttggtagctgaagaattgagtcgtgctggtcttgccgcttctgcatatcatgcg
ggtatgactgacgctcagcgacgtcgtatccaagaagcatggatccaagaagataaatgc
aagattgtgtgtgcaaccatcgcctttgggatgggaattgataaaccggacgtgcgtttt
gtgattcatcactctctacctaaatccatcgaaggatattaccaagaagctggtcgttct
ggtcgcgatggccttcctgctacttgtatcctctactaccactggcatgatgtggttcgt
ctgcggaagcttattcaaggtgatactcctggatccaatacattcgccaacatccagcta
cacgaggaagccttatttcgaatggtttcttactgtgagaaccagattgattgtcgtcgt
cgccaaattttatcccatttcggcgaggcttttgatgcggctgactgcggtttggtggtg
ggttgcatgtgtgacaactgccagcaggctgatcgacgacgtctggagcaacgagatgta
acagaagacgctgtcttgatcgtgcgagctgtagacggctttgttcgatcgcgccgtaat
gtcaccatcaactactgtgtggatgtctttcgcggggcacaaaccagccagatccaacgt
gctcaggacaaccttaatcccttgtacaaccgaggagcttcatattccaagacagatgca
gaacgacttttccatcgtttggtagccgaaagcgtcctgtacgaggagttgactgtgact
catcaagaccacgtagttgcatacgtccgccctggctcgaaagctgtacgactactggaa
ggttccctgaagatacatctacctatcagtatgccaagccggccgggagcagcggaagca
aaaatgattggccgcgagccagaagatcgctacgcaaagatccgcaatgaatgttacgag
gagttggtacaagtcgcaaaacaactgacctcggagcaaggcatttcaaactacgcaacc
gtatttcccaacgagatgttactcgaaatggctgcgcatttgccgactacgagagaagaa
ttgctacaggttcctcagtgtaccgaatacaagctgaaccgattcaatgcacaagatcgg
tttttggaaatcacattgaattatttgtccattctgggggcccttaaatcggaagagcaa
caacaggaagcacagttgacatcagctgcccctgatttcgccacttttccatcacgatca
cagtggaactcgaccaaaccccgagggcgatccaaaaaggcatcctcacattattttaaa
cgcggcggtggcaaagccagttacttgttcgggaaatatcaaaataaagctacagcccgt
aacagtcagcagcagagttcaacctcaactaatggatggaagcgaaaagctccagagccc
ttgccaacaaccaatgcatttcaaccgaaacttatgaaactatccgttaaaagagaataa
DBGET
integrated database retrieval system
