Opisthorchis viverrini (Southeast Asian liver fluke): T265_09833
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Entry
T265_09833 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K15172
transcription elongation factor SPT5
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
T265_09833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ovi03021
]
T265_09833
03019 Messenger RNA biogenesis [BR:
ovi03019
]
T265_09833
Transcription machinery [BR:
ovi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
T265_09833
RNA polymerase I system
T265_09833
Messenger RNA biogenesis [BR:
ovi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
T265_09833
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt5-NGN
KOW4_SPT5
KOW2_Spt5
KOW
KOW5_SPT5
KOWx_SPT5
KOW1_SPT5
Spt5_N
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_EML_2
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
20324001
NCBI-ProteinID:
XP_009174283
UniProt:
A0A074Z8Q2
LinkDB
All DBs
Position
Unknown
AA seq
1255 aa
AA seq
DB search
MAQWLELEFTDRKIRGSSPTTASRFLPSSLGQPGCIPTLMLRSGGMAAGHRKGATAERLF
SIKFLLSRRYPVFTELRCNAFSEFSWHPIRRKHEGWDTARSPKPRQEKSRDRGLTRTTDL
PDMFHDEAEVDEEEEEEDDEYQDEDELIGPEDEEALDAVPAARELDSRRRIREIMDQDEE
EIERYYQERYESQNYVDRFGDGEAMADSIIQKERLPGIKDPNLWALRCKMGEEKATVLAL
MRKFIAYQYSDTPLQIKSAFAKEGLKGYIYVEAFKQTHVKQAIEGITALRLSQYKQQLVP
ISEMTEVMRVVKESGQLKADQWVRVKSGLYRDDLALVEYVEDAQNLVSLKLIPRIDYDRR
RSRATAEEEDSNKTQRFRRPPQALFAPNKALDRIQRDGSWTIFEGNRYDSDGFLHKQFRI
SAVVIEGIRPTLAELERFHQTPDSLQLAAVAATAVAAAGNVPVTDSTITHCFTPGDVVEV
CEGDLKNLRGRVVSIEGNNRIVVQPNHSDLHEPIPFTPVELRKFFNQGDHVKVLAGRHVN
QTGLVIRFEPSLAVVLSDHSMNEMKVAPKDLRLWQDRASTLDSSGHVQMMDLVQVDPQTV
GVVVNVEPEQVSVLTCFGKVVNLKSNTALRRLNTQRRRPAQAMDRNGNLIQVKQTVRLLE
KPHCGLIGEVKHLYRSWAFIYSRTHLENAGLVVAQTRQLAVLNSTQNAPEQQKAVNDFRT
ITPLNGARNVGFEHDGRGRGDRMERKLIGKTARIVKGTLKGLLGIICDATPTHVVLELHS
QFKKVPVARENMALLDSGGHIMDTQYGATTPRVTPMREMRTPQLAYGAQTPHAASTTPRG
DSTPLPSAFNAGLATPKLSNLDDPMTPNSSFLWSSSDLHRIPGSSTHSFSDNEYPDTRMT
VNDLREIAYTSVVSHALSPCGRLLVFGTNMGRLLIHLLSPQYHDSSFEAKPIESITLEYP
KGWHALSTVGNFLFCGFGDQLACYKWTADDKRILTFLNRTRVSPISSHFGDTSITRVLYH
TEMNQLYVCDSAGSVHVYAIGSNVIPLHKFTAHNSTIHSISSAGSKQFVTSSEDGLVRFW
DCRTIGHSDQCTSSFQPHNELVLARPRLGNWLTTVACDPSDYNWFVTGGGPRLALWNRRV
GKYVVPLVPDTPEEWYPQTSLFSLPGEDVRIMAGGNSGRLFRWDHAGCLVSSLALTEPPR
ARISHVIVADSLRIPTEESSTNPTSTSSVIVAAGAGPAIRLVSMLGYPLGLLSLR
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atggctcagtggttagagctcgaatttactgaccggaagatccgtggttcgagtccgacc
actgcctctcgatttctcccgtctagtcttgggcaacctggctgtattccaacactcatg
cttcgttctggtggcatggcagctgggcaccgaaagggtgctacagctgaacgattattt
tcaataaaatttctcttatctcgacgatatccagtgttcactgagttgcgctgtaacgcc
ttttcggagttcagctggcatcctatccgaaggaagcacgagggatgggatactgccagg
tcgcccaagcctagacaggaaaagtcgagagacaggggtctgacccgaaccacagacctt
ccggacatgttccacgacgaagcggaagtggatgaagaggaagaggaagaagatgatgag
taccaagacgaagacgaattaatcggcccagaagatgaagaagcgcttgatgctgttcca
gcggctcgtgaactggactcacgccgtcgaattcgggaaataatggaccaagatgaagag
gagattgagcggtattatcaagagcgttatgagtcgcagaactatgtcgatcgatttggg
gacggtgaagcgatggccgacagcattatccagaaggaacgtcttcctggcataaaagac
ccaaatttgtgggcgttgcggtgtaaaatgggcgaagagaaggcaacagtgttggcattg
atgagaaagttcatcgcgtaccaatactcagacacacctttacaaattaaatcagcgttt
gcaaaagaaggcttaaagggttacatttacgtcgaggctttcaagcagacacatgtgaaa
caagcaatagagggcataaccgcactgcggctatcgcaatacaagcagcaactagtccca
ataagcgaaatgacagaagttatgcgagtggtaaaggaatctggccagcttaaagccgat
caatgggttcgtgtcaaatcaggactttaccgagatgaccttgctttggtggaatatgta
gaagacgcgcaaaatctggtctctctcaaactaatcccgcgcattgactatgatcgcaga
aggtcacgcgcaacggccgaagaagaagattcgaataaaacgcaacgcttcagacgacct
cctcaggcattgtttgccccgaataaagcactcgaccgcattcaacgcgatggttcgtgg
actatctttgagggcaaccggtacgactcagatggtttccttcataaacagttccgaatc
agcgctgtggtcattgaggggattcgacccacgcttgccgaacttgagcgattccaccaa
acgccagacagcttgcagctggcagcggtggcggcaacagcggtcgctgcagcaggcaat
gtcccagttacggattcgaccatcactcactgcttcacaccaggtgatgtggtggaggtt
tgtgaaggagatttgaagaatttgcgtggaagagtggtctcgattgaaggaaataatcga
atagttgtgcagcccaatcattctgatctgcacgaacccattcctttcactccggttgaa
ttgaggaagttcttcaatcagggtgatcacgtaaaggtcctcgctggtcgccacgtcaac
cagacaggattggttattcgttttgagcccagtctggccgtagtattgtccgaccacagt
atgaacgaaatgaaagtagcacccaaagatttgcgtctctggcaggatcgggcatcgaca
ttggattcatctggccatgttcaaatgatggatcttgtccaagttgatccgcaaactgtg
ggtgtcgtggtaaacgtagagccggaacaggtctccgtccttacgtgcttcggaaaagtt
gtaaatttgaaatctaacacagctttgcgtcgtttgaacacacaacgccgccgcccagcc
caagccatggatcggaatggcaatctcatccaggtaaaacagacagtaagacttttggag
aagccccattgtggtctaattggagaggtcaaacacttgtatcgttcgtgggcatttata
tattcccgaacgcatctagagaatgcgggtttggttgtcgcgcagactcgtcaattagct
gtgttgaacagtacacagaatgcgcccgaacaacaaaaggccgtaaacgacttccgaacg
atcacccccctcaatggtgcacgaaacgtcggtttcgaacatgacggtcgcgggcgtggt
gatcgtatggaacgtaaacttatcgggaagacggcaagaatagttaagggcacactgaaa
ggtcttctgggcatcatctgcgacgcaacacctactcacgttgtccttgagttgcacagc
caattcaaaaaggttcccgtcgcgagggagaatatggccctcttggacagcggtggccac
attatggatacgcaatacggcgctaccactcctcgcgtcactcctatgcgcgaaatgcgc
acaccgcagctcgcttacggagcacaaacgccgcacgctgccagcaccactccgcgtggt
gatagtactccgctaccaagcgcttttaacgccggattggccactccgaaactaagcaac
ttggatgacccaatgacacccaattcgagttttctgtggtcatcgagtgatttacatcgc
attccaggttctagtactcattccttctctgataacgagtatccagacaccagaatgaca
gtgaacgacctgcgtgagatcgcctacacaagcgtggtttctcatgctttgtctccgtgt
ggacgtctcctcgtttttgggacaaatatgggtcggctcttgatccatttattatcccct
cagtaccatgattctagctttgaggcgaaacccattgaatccatcacactggaatatcct
aagggctggcacgcgctgtctaccgtcggaaatttcctcttctgtggatttggcgatcag
ttagcttgctacaaatggacagccgatgacaagaggatactgacttttctgaatagaaca
cgtgtttccccaatttcctcccattttggcgatacaagtatcacaagggtactctaccat
actgagatgaaccagctgtatgtgtgtgatagtgcaggatcagttcatgtctatgcaata
ggttcaaatgtgattcctctccataaatttactgcacataattctactatccactcaatc
tcctctgccggatcaaaacaatttgttacttcttcggaggacggactggtgcggttttgg
gactgtcgcacaatcggtcactctgatcagtgtacatcttccttccaaccgcacaatgaa
ctcgttctagcgcgaccaagacttggcaattggttgacaactgtagcctgtgacccatcg
gactacaactggtttgtcactggaggtggccctcgtttggcactgtggaaccgtcgagtt
gggaaatatgtggttcctcttgtccccgatactccagaagaatggtacccgcagacgagc
ttattctctcttcccggtgaggatgttcggatcatggcaggtggaaattcgggtcgacta
tttcgatgggatcatgctggttgtcttgtgtcctcgcttgctttaacagaacctccaaga
gcacgaataagtcacgtgatcgttgcagactcattacggattccgacagaagagtctagc
acaaatccgacttcaacctccagtgttattgtggcagctggtgctggtcccgccatccga
ctcgtgtccatgcttggatatcctctaggccttctgagcctccgataa
DBGET
integrated database retrieval system
