Opisthorchis viverrini (Southeast Asian liver fluke): T265_10067
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Entry
T265_10067 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
T265_10067
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ovi00536
]
T265_10067
Glycosaminoglycan binding proteins [BR:
ovi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
T265_10067
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_1
Laminin_G_3
Nup188_C
Motif
Other DBs
NCBI-GeneID:
20324235
NCBI-ProteinID:
XP_009174593
UniProt:
A0A074Z7Z7
LinkDB
All DBs
Position
Unknown
AA seq
1673 aa
AA seq
DB search
MPVTFLSTETMQLYRWGTRMQRRSNPIGSRLAMVFILFLSSIILSATGLLSGRPESPQGA
PELLRAIHLAEQAYVEPFPGHCRTRLDEFGQARPLDEPTHAYSIARGISLYIEGSRLTPN
LPLSELSVLFTARVDPGFAGELFTLYDRHGHIQLSLTFGRKLTIQYLVRPTALPHPRISQ
VDRNQQTETIGFQTRLDDGLWHRVAISMQKAEVRLFVDCRQRESVAYNRTTITVDSRGRM
RVLKDGIQGAIQDLFVAPTADIASKQCDVYTTDCLEDQMMGDEAASQIEETLRGPMGATG
AMGPPGDKGEMGHNGSVGLAGEPGQPGPAGSLFVIPLNLGVGDANYARAAVFRDLLQKHL
LSLKGVRGARGMTGSPGPDGMQGERGIKGEPGAPGETGFQGPRGPLGMPGRPGPAGRPGL
DGSRGDPGVNGAPGEDGRPGDSGYMGPKGLKGEIGPRGPKGDVGLPGGEGPRGPVGEPGE
QGDVGLPGLQGPVGIPGPQGPRGKPGGPGPHGRKGETGEQGLPGLAGPPGPVGAPGPEGI
AGPRGPPGPPGIRGRPGAVGVPGSDGPPGFPGPKGDIGPKGESGDPGQKGEAGTQGPRGY
KGERGRMGAIGIKGDTGKPGPIGVAGEIGPKGLKGDIGLIGPVGRPGPMGEKGNPGPPGP
IGARGDPGGKGFAGAVGPPGPPGPDGERGPIGPTGPRGRDGDKGEVGSQGPPGDSGEQGQ
RGLPGPRGPPGKPGPIGIKGDAGAVGPVGPAGPIGEPGVQGPMGPVGPPGQQGAVGRPGP
AGFPGPRGEPGERGPPGQPGPLGATGPTGATGDPGPDGERGPVGPGGPTGDTGKDGLPGR
DGSPGQKGVRGPQGLPGGRGPRGFSGFDGLPGRSGPPGAKGETGPDGEVGPIGSKGYQGD
QGPMGPIGSPGSMGPRGPPGPAGEKGTTGLDGPYGLVGSPGPRGPQGRPGPVGQIGPQGF
EGEKGSKGASGSPGVKGDKGANGIRGPPGPVGSPGLPGIQGPPGIPGQPGEEGPQGLSGP
EGTRGIAGSPGQVGMRGAPGVSGPPGEKGDAGTPGPRGRTGSPGLPGPPGQAGIPGDIGS
LGPPGMTGEKGDAGQQGPPGSPGFEGIAGLQGPVGSPGEEGPLGLEGPLGDMGEQGIQGP
KGEVGPPGLPGPAGVKGPQGAKGAPGGVGEDGSLGPRGKPGEPGSRGAPGPPGPEGSPGM
TGPQGPDGPRGQKGVKGETGEVGPPGEPGRRGPIGASGPRGPPGAMGPRGQPGSVGLPGS
QGDRGPDGVTGPHGDPGEAGKPGPKGIKGADGPIGPMGPPGPKGEKGIPGFSGERGPPGP
KGVMGPQGPEGRPGPPGPPGTEGPEGSPGYPGPIGPPGPQGAKGAPGAMGPPGPPGAIKI
LDVSEGYYRFEDMPRARRSVDSSLTKQDPDEAITPSNVPSIGAVLRRVYERIENLENSLN
MFDRPAGTRQYPARHCRDILRSSEAPETLKFGQYWIDPNLGSKVDAFLAECRFRDGKTAQ
TCIQPIPESQTLPLTQFKKTDREKEWWFSRLKTQIPNQNFTRTQLYYAPHNQIRYLQMLH
QTAEQSVTFLCRNTAVYYDTKQRNHKSAVRARLFNEVEINTYEDRRVRAASGTMLLEVKV
RDECMERASHRSTSVFEFIARETQMLPILDFQLIEFGDTDQEIGYYVDSVCFS
NT seq
5022 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgacgtttctgagtacagaaactatgcagctttaccgctggggaacaagaatg
cagcgtcgatctaatccaatcggcagtcgactcgcaatggtgttcatcttattcctctcc
agcatcatcctttctgctaccggactactcagtggccgtccagagagtccacagggcgct
ccagaacttctcagagccatacatcttgcggaacaagcttatgtggaacccttccctggt
cactgccgtaccagattggatgagtttggtcaagcacgaccgctggatgaaccgacacac
gcctattccattgctcgggggatcagtctgtacattgaggggagccgtctgaccccaaat
ctcccgctgtcagaattatcggtgctattcactgccagagttgacccggggtttgccggc
gaactctttactctgtatgatcgccatggccatattcagctcagtttgacttttggacga
aagttaactatacaatacctcgtgcgccccactgctctgcctcatccacgaatctctcag
gttgacagaaaccaacaaacagaaactatagggttccaaacaagacttgacgacggtctg
tggcatcgagttgcaatcagtatgcagaaagctgaagtccgattgtttgtggattgtcgc
caaagggagtcagttgcatacaacaggacaaccataacggtggattcccgtggtcggatg
cgagttttgaaggatggaattcaaggtgctatccaagacctgtttgtcgcaccgacagca
gatatcgcgagcaaacagtgtgacgtttatacaaccgattgcttggaggatcaaatgatg
ggtgatgaagcggcatcccaaatcgaggagacacttcgcggaccaatgggagcgactgga
gccatgggaccccctggtgataaaggtgaaatgggccataatggctcagtgggtcttgct
ggagaacccggtcaacctggtccagccggatcgctctttgttatcccactgaacttggga
gtcggagatgccaattacgcgcgtgcggcagtgtttcgggatttgcttcagaaacatctg
ctttcactcaaaggtgtacgaggtgctcgagggatgactggaagccctggacctgatgga
atgcaaggagaacgagggatcaagggcgaacctggagctcccggtgagactggatttcag
ggacctcgtggtcctctcggtatgcctggtcgaccaggtcctgcaggtcgtccgggtctg
gatggttcacgtggagatccgggggtcaatggagctccgggcgaagatgggcgtccaggg
gattcggggtatatgggtccgaaaggcttgaaaggagaaatcggtccacgaggaccgaag
ggagacgttggacttcctggaggtgaaggtccacgtggacctgttggggaaccgggtgaa
caaggggatgtcggtctaccggggttgcaaggaccagtgggtataccaggaccgcaaggc
cccagaggaaaacctggtggtccaggaccccatggaagaaagggcgaaacgggcgaacaa
ggcttacctggtttggccggcccgccaggccctgttggcgctccaggacctgaaggtatt
gctggcccccgtggaccccccggaccgcctggcattcgcggacgtccgggtgcagtcgga
gtgccagggtcagatggtccaccgggatttccaggtccaaaaggtgacatcggtcccaag
ggagaatctggcgatccgggtcaaaagggagaggcaggcacacaggggccacgtggttac
aaaggggaacgaggccgtatgggcgcgatcggaataaaaggcgatacgggcaaaccagga
ccgattggtgttgcaggggagattggtccaaaaggtttgaagggtgacattggcctgatc
ggtccggtgggacgccctggaccgatgggagagaagggaaaccccgggccaccaggacca
attggggcacgtggggatcctggcggaaaaggttttgctggtgctgtaggaccccctggt
ccccccggtccggatggcgagcggggtccaataggaccaactggacctcgaggtcgggat
ggagataagggcgaggtgggtagtcagggtcctcccggagacagcggtgaacaaggccaa
cgtggactccctggtcctcgtggtccacctggaaaacctggaccaattggaataaagggc
gacgccggagcggttggaccggtaggtcccgctggacccattggtgaacccggagttcaa
ggcccaatgggcccagtcggcccaccaggacaacaaggtgcagtaggtcgaccaggtcca
gccggatttccaggtcctagaggtgaaccaggtgaacgcggacctccaggtcaaccagga
ccactcggcgccactgggccaacaggtgccaccggtgatccaggccctgatggagaacga
ggaccggttggtcctggaggccccactggtgatacagggaaagacggtctacccggacga
gatggctcaccaggccaaaaaggtgtccgtggtccacaaggcctgcctggtggaagggga
ccacgtggattctctggattcgatggactacccggtcgcagtgggccccctggagcaaag
ggcgagactggcccggatggtgaggttggcccaatcggcagtaaaggctaccaaggcgat
caaggtccaatgggtcctatcggttctccaggttcaatgggtccccgaggtcctccagga
cctgctggggagaaaggaacgacaggtttggatggtccgtatggacttgtcggttcacca
ggtcctcgaggtcctcagggtaggccaggaccagtcggacagattggcccacagggcttt
gaaggcgaaaagggttcaaagggtgcgagtgggtcacctggcgtcaaaggggataaaggg
gctaatggcatacgtggaccaccaggaccagttggaagccccggattgccaggaatacag
ggaccgccggggatacctggacaaccgggagaggagggaccccagggactatcaggaccc
gaaggcactcgaggaatcgctggatcacccggccaagttggtatgcgtggagcacctgga
gtctctggacctccgggtgagaagggagacgcagggacacctggtccacgaggtcgaact
ggctcaccgggattacctggtccccctggtcaggctggcattccgggtgacattggtagt
cttggtcctcctggtatgactggagagaaaggtgatgcaggtcaacagggacctcctggc
tctcccgggttcgaaggaatagccgggttacaggggcctgtaggttctccaggagaagaa
gggcctttagggctggagggtccccttggagacatgggcgaacaaggaatacaaggacca
aaaggagaagtgggccctccaggattgcccggacctgcaggtgttaaaggtccccaaggt
gccaaaggagctcctggcggtgtcggagaagatgggtctctgggtccacgcggaaagcct
ggtgagcccgggagtcgtggagcaccgggaccgcctggaccagaaggttcgccgggcatg
acgggaccacagggtccagatggtcctcggggtcagaagggagtgaaaggggaaaccgga
gaagtcgggccaccaggtgaacctggaagacgtggtcctattggcgccagtggacccaga
ggtccaccaggtgctatgggaccgcgtggccaaccgggctcagttggactacctggcagt
caaggtgatcgcgggccagacggtgtaacaggtcctcatggagatcccggggaagctggt
aaacctggtccaaagggaattaaaggcgccgatggtccaatcggtccaatgggtccccct
ggacccaaaggagaaaagggcattccaggtttcagtggggaacgtggaccacctgggcca
aagggtgtaatgggtccgcaaggtccggaagggagacctggccctcctggaccaccaggt
acggaaggcccagaaggatctcccggatatcctggacctatcggtccacctggaccacaa
ggagccaaaggagcacctggcgcaatgggtccacccggtcctcccggggcgattaaaatc
cttgatgtcagtgaaggatactatagattcgaagatatgccacgcgcaagacgaagtgtg
gactctagtttgacaaaacaggatccagacgaggccatcacacccagcaacgtcccgtcc
atcggcgctgtacttcgtcgcgtgtatgaacgaatagaaaatttggagaattcgttgaat
atgtttgatcgaccagccggaacgagacagtatccagccaggcactgtcgtgacattctt
cgttcatctgaagctcctgaaacactcaagtttggacaatactggatcgatcctaatctc
ggttccaaagtggatgcgtttttggcagagtgccgtttcagagatggcaagacagcacag
acttgtattcagccaattcctgagtcacaaacgttaccgctgacgcagttcaagaagaca
gaccgagaaaaagaatggtggttctcaagactgaagacacagattccaaatcaaaacttc
acccgaacacagctgtactatgcaccccataatcagattcgctacttacaaatgctacac
cagacagcagaacaatcggtaactttcctgtgtcggaacacggcagtctactacgacacg
aagcaaaggaatcacaaatcagccgtgcgagctcgtctgttcaacgaggtcgaaataaac
acctacgaggacagacgagtacgagccgcaagcggaactatgcttttagaggtcaaagtg
cgtgacgaatgtatggagcgggcatcgcatcgatccaccagtgtgtttgaattcattgcc
cgagagacccaaatgctgcccatcttggactttcaactgatcgaatttggcgatacagac
caggagattggttattacgtagactccgtctgtttcagttga
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integrated database retrieval system
