Opisthorchis viverrini (Southeast Asian liver fluke): T265_10276
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Entry
T265_10276 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
T265_10276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovi03019
]
T265_10276
Messenger RNA biogenesis [BR:
ovi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
T265_10276
mRNA degradation factors
5'-3' decay
Lsm complex
T265_10276
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
20324444
NCBI-ProteinID:
XP_009174860
UniProt:
A0A074Z2V9
LinkDB
All DBs
Position
Unknown
AA seq
220 aa
AA seq
DB search
MHQRNYPGSASLFHDLGKKMMVCLHGGRVYFGFLRIIDQFGNVVLHQAFERIHVDKKFCD
IPQGILMIRGENIILIGEVDENCNIEEQLELVSEKEIYALQAERTAARKALSKRRAQLFA
ARGLGLPDPSDLLCNTLPVSSCHATRGTHEGWDTARLPKPRQGNSRGRDQRPPVSKFALQ
PLDHPVPLSHLALKDSANRIKFKKSETTGGLSKSCRQTYM
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgcatcagcgaaactatcctggatcagctagcttgttccacgatcttggaaaaaagatg
atggtgtgtcttcatggtggacgagtttattttggattcctgcgtattatcgatcagttt
gggaacgttgttctccatcaagcttttgaacgaattcatgtggacaaaaagttttgtgac
atccctcaagggattttgatgatccgtggagaaaacatcattctcatcggagaagtggat
gagaactgtaacatcgaggagcagttggagctggtatcggagaaagaaatttacgcccta
caggccgagaggacagctgcccggaaagctttgtcaaagagacgagcacaattatttgcc
gctcgtggactgggtttaccggatccctcggatttactctgtaacacccttccggtgtct
agctgccatgccacccgagggacacacgagggctgggatactgccaggttgcccaagcct
agacaggggaattcgagaggcagagaccaaagacctccggtcagtaaatttgcactccaa
ccactggaccatcctgtacccttgagccatctcgccctcaaggactcagctaatcggatt
aaatttaagaaaagcgaaaccactggtggactatcgaagagttgtcggcaaacctatatg
tag
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