Opisthorchis viverrini (Southeast Asian liver fluke): T265_10482
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Entry
T265_10482 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
T265_10482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ovi03041
]
T265_10482
Spliceosome [BR:
ovi03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
T265_10482
Complex B
T265_10482
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
DUF4523
RRM_occluded
xRRM
K_channel_TID
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
20324650
NCBI-ProteinID:
XP_009175128
UniProt:
A0A074Z6D9
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MNPVAGATHMPVMAPNLLVGLPPVAAHHMIHGVAPVAIPPAPAEVTGSPNNTLYIRNLNE
KIKRDELKKSLYAVFVQFGQILDIITSRTLKMRGQAFVVFDDVNSATTALRAMQSFPLYE
KPMRIEFAKGDSDIIAKRKGTYVARPKALSRAAAAAAAEAAAAAAAAFDASAGPQGGTSA
RAIRRRQQRAAAAAAAAAATSGAAVPPPPNMDGGVQPAITQPAPPPINPAMIPDQPPNKI
LFLTNLPEDSDEAMLSMLFNQFSGYREVRMVPGRHDIAFVEFATSDTCLMDIRPNHTLYV
NNLNDKVKKADLRKALYYLFGQHGRLLDIIAMKTMKMRGQAFIIYQDVQSATTALRSLQG
FNLFQRPMRIAYAKRDSTQIVQLKGVSAEVQKRREEEREKRKRRKVAQRLAAAAAAAQAA
TQAANGPAGTGDALNLLDQPNNILFVTNLPEETTDAMLTMLFSQFSGFKEARRAPGGVWF
VEYESAEQAAAARSAYEGFKLTPTHAMQISFAKK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccgttgctggcgccactcacatgccggttatggcaccaaacttacttgttggc
ctcccaccggtcgcagcacatcacatgatccatggggtggcacctgttgccatcccccca
gcacctgctgaggtgactggctctccaaacaatacactgtatatccggaacttgaatgag
aagataaagcgtgatgagctgaagaagtcactctatgcagttttcgttcagtttggtcag
atattggacataattacctcccggacattgaagatgcgtggacaagccttcgttgtgttt
gacgatgtgaacagcgcgactacggcccttcgggctatgcagagctttcccttatatgag
aaacctatgcgaattgagttcgccaagggggactccgatataatagccaagcggaaaggg
acttacgttgctcgacccaaggctcttagtcgtgctgctgccgcagccgcagctgaggca
gcagctgctgctgcagcagccttcgatgcctctgcaggtccgcaaggtggaactagtgca
cgcgccatcagaagacgacaacaaagagccgcagccgctgcagccgctgctgctgctact
tctggtgcggctgtgccaccaccaccgaacatggacggcggagttcaaccagcgatcacc
caaccggctccaccaccaataaatcctgctatgattcccgatcagccgccgaacaagatc
ctcttcttaactaatctaccggaagattcggatgaagccatgctgagcatgttgttcaat
caattttccggctatcgtgaggtccgcatggtccctggacggcatgatattgcttttgtc
gagtttgccacctctgacacctgcctgatggacatcaggcctaaccatacactgtatgtg
aacaatctaaatgataaagtgaaaaaagccgatttgcggaaagccttatactatctgttc
gggcagcatggacgactattggatattatagccatgaagacaatgaagatgcgtggacag
gcgttcataatctatcaagatgtgcaatcagccaccacagcgttgcgatctctccaagga
tttaatctatttcagcggcctatgcggatagcgtacgccaagcgagattccacacaaata
gttcaactgaagggcgtcagtgccgaagttcagaagcgtcgggaagaggaacgtgagaag
cgaaaacgaaggaaggttgctcaacgcctggcagcagccgccgcggctgctcaagcagct
actcaggcagcaaacggtccggcgggaactggagatgccctgaatttattggaccaaccc
aacaatattctgtttgtaacaaatctcccggaagagacaacggatgccatgttgaccatg
ttgttcagtcagttctccggtttcaaggaggcccggcgggcaccaggtggcgtttggttt
gtggagtacgagtccgctgaacaggccgccgccgctcgctctgcttatgagggattcaaa
ctgacaccaactcatgcgatgcaaatctcgttcgccaaaaagtga
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