Opisthorchis viverrini (Southeast Asian liver fluke): T265_10488
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Entry
T265_10488 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K14312
nuclear pore complex protein Nup155
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
T265_10488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovi03019
]
T265_10488
Messenger RNA biogenesis [BR:
ovi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
T265_10488
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
RVT_1
Motif
Other DBs
NCBI-GeneID:
20324656
NCBI-ProteinID:
XP_009175134
UniProt:
A0A074Z2B0
LinkDB
All DBs
Position
Unknown
AA seq
1935 aa
AA seq
DB search
MRVENGPGNIMRIDSKKDLGTWVSSNLSFSLRHEQSAQKAFAILRMIRCTFSRITRMDFQ
ILYGAYVRALLEYANQVAYSEHTKDVTLTERVQQAATRMVASLKSVDYEARLAMLDFFSL
EYRRLRGDLILTYALSEQSLANSFFTVDPANTRGHSSGTCESIRLSKSFRTQSGVHQGCP
FCRFFFSFVIDEIIRNNKGLQNPGVQISCEENLVDLEYVDDIVLIFEEGGKVRVFLDEMT
KVIPSFGLQFAPKKVMLVDVQSLNTPLTIQGEVLEIVERFTYLGSCISSDCSVTDEVNAR
ICKARIAFANLKPLWRQNGLSVNLNGRKTVGSSGTRELDYPSMRFHAGGELEVHKSFSLP
PELIEKFAGMFFYPFLSFTHPTLPSSPRNAEQLSDGHIHVVQSSLGDDRQRTVYVELRGW
VCIIDSNVETVCFYSDDLAYYDGIKDTIICVGLAQPRVGVLPDRIQHLLCIATALELFVL
GVTYSTTAGAPIGHHGEVLHVLPDPLYCLPTDNYTVTCMECTTDGRMFLGTQEGSLLELN
YSPIPGWTGDPSVPLSRTGPCTLINHSASAISLLLPAVLTTGFRTTDAICQLVSDPTRQL
LYLRTENSNLAVYSYSIKATVGTSLTRSAQLSSSDLAYTASGVVRSVDKAQFRSIASVLP
LFGGPFHLMAVTKTGIRLYFGEQLRLLHIRLPPTSPYGRLGLGEVKLVAETRGTVVLISA
LPPNAASIGTARPLLTKTSDTQPFVPVPPTTLSSPISSGSVTGGEPDTSTRSSYDVPPNI
LYTLSPDPYPWTPNLTEVCTTAWCVGGVWALTVLPSDEPVSLDFAFSRNTTSPCPRGQPP
VVLTQHLDPPYRRLLLISAQGLVHLRLPSPIVRLKEFLLREVSSRLLNTSVNLFPEQPPL
LTPGSFVKQTPGVMYPSFGDLDDVSPELLRNTGFLSAYLHQFSPDEAICAALIIGSAHSS
LGESDNRGLGVAVEQAVLFFAAEAAQFWVPAVRRPNPGSGALIRQSALTSSQGTSQPIDR
ALFSGMFLFSGITVFLARMARTFWRSPLFRDASAVSNGSLAKSNQSSGLIGSWMRSFVNV
LASASPLRGGRSTTEENRPVISRLDPNEITWLIHQLSYLQRFLQRQLKLRGGWLRASTAG
LTSHPEKSAAGDESSDQVDGILLQRLSEELDKLLGAMLEILEFWRIFSEHAVHRIAENLT
SDQRALLLQVPFESYTLCLLDSSQSTAQPLLIQKEFTTPTSPTTPPHASFGANVGLDLIS
ALINALIEYYLTESGRDVDSGISLDVITTRLRSNCPTLFANEDAISAKASECLIQAILLR
STLPTVEAESPVDASVDDTLSRIDELIANAQELYAEAGPGLDLEGAVTRLEACGAWRGAV
ALCLAVANKRDPNDVAVDCLKTGRRPSTDPIAVDGKRGVVEPRNRRQFYAQSELSATEGR
YDAYHHAVRCFERLWVLCQLPPSATDLLNQSSFTDIKQTAKLGTLSGACLLEVTPSPSSA
RTLLYSILQEEVVQSTDVLAHFEVFSWLISHGLTDTAVALNSPHLEAYLRSRLRQCPDDP
DLRCLLWRQLERRGSRLEAAQVLEHLAVTPCRKLTLEARLDFAARAIVTVRALPIAQQDV
DYLHDLESRLELGQLQHQLCVELSQLLDSRRSAAYSPRRTRSPLRPVTDGELQEAIFKLS
HGPLLSLSEMFTDYADKFGLHECKLVLLWVGDSQDAALINAIWRDLLRSILNTAGPTSAY
IPGTKLSSPLRTVDAETRRRNVDSSHKLAELAIVDCLARLGNRFSVDGSLSSIKSQTFFP
LGEILSTLEYYAVQQKLPCTWVPTILRDTRLTCSSSIVEAYDTLLHSKNTLWRHSDVRSR
LFSAFVTVIEDFLNVVSIQLPARQRMLQIGRILDRVTSNLVDLNSTSTKESKDTQTPRVI
ERLRHVHDQLQRFYR
NT seq
5808 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttgagaatggaccaggaaacatcatgaggatagattccaaaaaggatttgggc
acctgggtctcctcaaacttgtccttctcactgcgccatgagcaatcggcccaaaaggca
ttcgccattttacggatgatccgatgcaccttctcccgtattactcgcatggacttccaa
atactctatggggcctacgtcagagcgctcctggaatacgccaaccaagttgcctactca
gaacacacgaaagacgtcaccctcactgagcgtgtccagcaagccgccactagaatggtt
gctagcctcaaatccgtggactacgaagcgcgtctcgcaatgcttgatttcttttctcta
gagtaccgtcgcctccgaggggacctaattcttacttatgccctgtctgaacaaagcttg
gcaaacagttttttcactgttgacccggcaaacacgcggggacatagctccgggacatgt
gagagtatacggctctccaaaagctttcgtacacaaagtggtgtacatcagggatgccca
ttctgccggttcttttttagcttcgtgatagatgaaataataagaaataataagggtctc
cagaaccctggtgttcaaatatcctgtgaagaaaaccttgtcgatctggagtacgtagac
gacatcgttctcatcttcgaagagggggggaaggtgcgagtatttttggatgaaatgacc
aaagtcatcccgtcctttggtttgcaatttgcacccaaaaaggtcatgctcgtcgacgtg
cagtcattgaacacgccacttacaatccagggagaggtattggaaattgtggagcgtttt
acttatcttggaagttgtattagttctgattgtagtgtgacagatgaggtgaatgcacga
atctgcaaggctcggatagcgtttgctaatttgaaacccctatggcgtcagaatggttta
tccgtgaatctcaatggacggaaaactgtcggatctagcggtactcgagaactggactat
ccttcgatgcgatttcatgctggcggagaactggaagtccacaaatcgttttcacttcct
cctgagctaattgaaaagttcgcaggtatgtttttttatccatttctctctttcacacac
ccgacacttccctcttcgcccaggaatgcagagcaattgtctgatgggcatattcacgtt
gtgcagtcgagcttgggtgacgatcgacaacgaactgtttatgtggaattacgaggatgg
gtttgtattattgattcaaatgttgagactgtttgtttttacagcgatgatctggcttat
tatgacgggataaaagataccatcatttgtgttggattggcacagccacgtgtcggtgtt
cttcccgatcgaatccagcatcttctatgcattgctactgcacttgaactgtttgttctg
ggagtgacctactcaactacggcgggggctcccatcggtcatcatggagaagtgttgcac
gtattaccagaccctctttactgtttgcccacggataactatacggtaacgtgtatggag
tgcacgaccgatggaaggatgttccttggtacacaagagggctctctgctagagctaaac
tattcccccatacccggatggacaggagatccctcggtgcccctgagccgcactggtcct
tgtacactcatcaatcattcggcttccgcaattagcttactgttaccggccgtactcacc
acgggatttcggacgacagatgccatatgccaactggtatccgatccaactcgtcagttg
ctctacttacgtaccgaaaactccaaccttgcggtttattcctattcgatcaaagcaacc
gtcggtacatcgctgacacgatcagctcagctatccagttcggatttggcctataccgcg
tctggcgtggtccgctcggtagacaaggcgcagtttcgaagtattgcctccgttttaccg
ctgtttggcggcccgttccacttgatggctgttacgaaaaccgggattcgattgtacttt
ggcgagcagttgcgtctgcttcacatccgattgccacccacatctccttatggccggctt
ggtttgggagaagttaaattggtcgccgaaactcgtggcacagtagttctcatctcagca
ttgccacctaatgccgcatccattggaacagctcgtcctctcctcaccaaaacgtcggat
acacaaccgttcgtacccgttcctcccacgacgttgagttccccgatttcttcagggagt
gtgactggcggggaaccagacactagtacacgatcatcgtatgacgtaccgcccaacatc
ctgtataccctcagtccagatccgtacccatggacgcccaatctgaccgaagtttgcact
acagcttggtgtgttggtggtgtctgggctctaactgttctgccctcggatgaaccagtc
tcccttgatttcgctttttccaggaacacgacttcaccctgtccccgtggacaaccacct
gttgtactaacccaacacctcgatcctccctatcgtcgtctgctgctgatatctgctcag
ggtcttgtacatctacgccttcctagcccaatcgtgaggttgaaagaattcctactgcgt
gaagtgtcttcacgactgttgaataccagcgtcaacttgtttcccgaacaaccgccactg
ttaacaccaggatccttcgtaaaacagacacccggtgtcatgtacccttctttcggtgac
ttggatgatgtgtctccggagttactgcggaatactgggtttttatcagcctacttgcat
cagttcagtccagatgaggctatttgtgcggcactcattatcggctcagctcattctagt
cttggtgaatcggacaatcgtggtctcggcgtggccgttgaacaagccgttctgttcttc
gctgcggaagccgctcagttctgggttcctgcagtgcgccgccccaatcctggttctggt
gccctcattcgacaatctgcgttaacaagctcacaaggcacaagccaaccgatcgatcgg
gcactattcagtgggatgttcctctttagcggaatcaccgtgttcctggctcgcatggca
cgtacgttttggcgcagtccgctgtttcgggatgccagtgcggtgtccaatgggtccctt
gccaagtcaaaccaatccagtggcttgatcggttcttggatgcgaagctttgtcaacgtc
cttgcttctgcttctcctctccgaggcggacggtctacaacggaagaaaatagaccggtc
atttcccgtttggaccccaacgagatcacatggttgattcaccaactgagttatttacaa
cgatttcttcaacgccagttgaagctacgtggaggatggctaagggcctcgactgctggg
ttaacctcacatccggagaaatcggcagctggcgatgaaagctcggatcaggtggacggg
atcctgctccagcgtttatccgaagaactggacaaacttctgggtgccatgctggaaatt
ttggaattttggcgtatctttagtgaacacgcagtgcatcggattgcagagaatctgacg
agcgaccaacgggccctactactccaagtcccatttgagtcatacactctttgcctgcta
gattctagtcaatccaccgcacagccgttgttgatacaaaaggagttcactaccccaact
tcgccaacaacccctcctcacgcgtcgtttggtgccaacgtcggtttagatttaatttcc
gcgctaataaatgctctgatagagtactacctgaccgaatccggacgggatgtggacagt
ggtatcagtttggatgttataaccactcgtctgcggtccaactgcccgactctgtttgcc
aatgaagatgcgatcagtgccaaggctagcgagtgtttgattcaagctattctgttacgc
tccactcttccgactgtggaagccgaatcaccggttgacgcctccgtggacgacaccttg
tctcgaattgacgaactcatcgcgaatgcgcaggagctgtatgcagaagctgggccaggt
cttgatttggaaggagcggtgacacgtttagaggcctgtggagcgtggcgcggtgccgtt
gctctgtgtctggcagtagccaacaaacgcgatccaaacgacgtggcggtagattgtttg
aaaactggacgtcgtccttccacagatccgatcgcggttgatggcaaacgtggtgttgtc
gaaccccgaaatcgtcgacagttttatgcgcagtctgagctatctgctaccgagggacgc
tacgatgcctaccatcatgcagtcagatgttttgagcgactgtgggtactgtgccagctt
cctcccagtgcaacagatctactaaaccaatcatccttcactgatatcaaacaaaccgcc
aagctgggaactctctccggagcttgtctactggaagtgactccgtcgcccagctctgcc
cgcacattgctctactccattcttcaagaggaggttgtccaatccacggatgttctggca
cattttgaagtgttcagctggctgatatctcatgggttgacagataccgcagtggcgctc
aactcaccacacttggaagcctatttacgctcgcgactgcgccagtgtcctgatgacccg
gacctacgatgtttgttgtggcgtcagttggagcgccgtggttctagactggaagctgct
caggtactagaacatttggcggtgaccccatgtcgcaaactgacactggaagcaaggttg
gactttgcagctcgagccattgtgaccgtgagagcattaccaattgctcaacaggatgtg
gactatttgcatgatctggaatctcgcttggaattgggccaactgcaacaccagttgtgt
gtcgaattgagccagttgcttgactctcgccgtagtgctgcgtattctcccaggcgcaca
cgatcacccctacgcccggtgaccgatggagagttgcaggaggcaatattcaagctctct
catggtccattgctcagtctcagtgaaatgtttactgactacgcggacaagtttggactt
cacgaatgcaagctggtcctgttgtgggttggggactcccaggatgcagcgttgatcaat
gcgatttggagagatcttcttcgttccatactgaatacagcgggtccaacatctgcctac
attcctggtactaaactaagctctcccttgcgtactgtcgatgcggaaactcgtcggcga
aatgtggactcatcacacaaactcgcggagcttgccatcgttgattgtctggctcgattg
gggaatcggttctctgtagatggcagtttgtcctccatcaagtcccaaacgttcttcccc
ttgggtgaaatcctctccacactagaatactatgcagttcaacaaaagctcccctgcacc
tgggtccccacaatcctacgcgatacgcggctgacttgtagctcaagtattgtcgaagcc
tacgatacgctacttcattcgaaaaacactctttggcgccattctgatgttcgcagtcgt
ttgttctccgctttcgttaccgtgattgaagacttcttgaatgtggtctctattcaactg
cccgcacgtcagcgcatgcttcagattggtcgtatccttgaccgggtgactagtaatctg
gtcgatttgaactccacctctaccaaggagtctaaagatactcaaacaccccgggttatt
gaacggcttcgtcacgtgcacgatcagctacaacgcttctaccgatag
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