Opisthorchis viverrini (Southeast Asian liver fluke): T265_10560
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Entry
T265_10560 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
T265_10560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ovi03041
]
T265_10560
03009 Ribosome biogenesis [BR:
ovi03009
]
T265_10560
Enzymes [BR:
ovi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
T265_10560
Spliceosome [BR:
ovi03041
]
Complex A
U1 snRNP components
U1 related factors
T265_10560
Complex B
T265_10560
Ribosome biogenesis [BR:
ovi03009
]
Eukaryotic type
Pre-60S particles
Helicases
T265_10560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
20324728
NCBI-ProteinID:
XP_009175226
UniProt:
A0A075A0V4
LinkDB
All DBs
Position
Unknown
AA seq
417 aa
AA seq
DB search
MPFRRRSFSRSPRRRRFTEPGRRLRAVDWGAYSLTRFEKKFYRECSSVRDRSRRDIEEFR
AREKVTVLGHNVPRPVFKFSETGFPSYILNVIKKNRWESPTPIQAQGWPVALSGRDLVGI
AQTGSGKTASFLLPGLVHAKAQPSLRRGDGPIVLVLVPTRELAQQVEKVVEEFCSYSGFR
SASLYGGTSRGGQMDQLARSPEVVIATPGRLLDFLQSKDTNLRRCTYLVLDEADRMLDMG
FEPSIRKIISQVRPDRQTLMWSATWPREVKALAEDFLYDYIQINIGSTKLSANHNIQQHV
EIVKESEKFHRLLALIKSFGDSRVIVFTETKRRTDTVCRQLLDKGFNALAMHGDKHQRER
DRALERRFYPLVTCIRSRIPFRSHFNLSCDRRRLAGVGRLGTARSPHKESLVFFGSE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgccattccggcgacgcagcttctcccgttccccgagaagaaggcgattcactgaaccc
ggcaggaggctccgtgctgttgattggggcgcgtactcactgacccgttttgagaagaaa
ttctaccgcgagtgcagcagtgttcgcgaccgatccaggcgtgacatagaagagttccgt
gctcgagaaaaggtcacagtgctaggacataacgttccacggccagtattcaagtttagc
gagacaggcttccctagctacattctgaatgtgattaaaaagaatcgatgggaatcccca
actcctattcaagcacaaggatggccggttgctttaagtggtcgcgatcttgttggcata
gcgcagactggatctgggaaaacggccagcttcctacttcctggcttggtccacgcgaag
gctcagccctcgctgaggcgaggcgacggcccaatagttcttgttttggtacctacccgt
gagctcgcacagcaagtagagaaggtcgttgaagagttttgctcttactctggcttccga
tcggcttctctatacggcgggacatctcgaggaggtcagatggatcaactagctcgctca
ccagaggttgttatcgccacccctggacgtcttttggactttttgcaatcaaaagacacc
aacctgcgtcgctgcacgtatcttgtcttggacgaagctgaccgaatgttggacatgggg
tttgaaccgtctatacgaaaaataatttcccaggtaagacctgatcggcagacccttatg
tggtctgctacgtggccgcgtgaagtgaaggccttggcagaagactttttgtatgattac
atccaaataaacattggttctacgaaactgagtgccaatcacaacatccagcaacacgtg
gaaatagtgaaagagtcagagaagtttcatcggctccttgccctgataaagtccttcggc
gattcgcgtgtgattgtcttcacggaaactaagaggcgcactgataccgtctgtcggcag
ctcctggacaagggcttcaatgctttggcaatgcacggtgacaagcatcagcgtgagcgg
gaccgcgctctcgaacgtaggttctatcctctcgttacatgtatacggtctagaattccg
ttccggtcgcacttcaatcttagttgcgacagacgtcgcctcgcgggggttggccgtctt
ggaaccgctcgctcaccacacaaagagtcattggtcttctttggctctgagtaa
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