Opisthorchis viverrini (Southeast Asian liver fluke): T265_10741
Help
Entry
T265_10741 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
T265_10741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ovi03021
]
T265_10741
03036 Chromosome and associated proteins [BR:
ovi03036
]
T265_10741
Transcription machinery [BR:
ovi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
T265_10741
Coactivators
SAGA/TFTC/STAGA complex
T265_10741
Chromosome and associated proteins [BR:
ovi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
T265_10741
STAGA complex
T265_10741
TFTC complex
T265_10741
SAGA complex
T265_10741
SLIK complex
T265_10741
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
EIF3I
Beta-prop_EML
TFIID_NTD2
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
WDR55
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
WD40_RFWD3
eIF2A
Beta-prop_WDR35_TULP_N
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
20324909
NCBI-ProteinID:
XP_009175468
UniProt:
A0A074Z1D7
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MYSVHPSRQTHDKPESFGVKYQSLLRFIDTIPDVHKVCLFLHQCLQISSWSCRLYSIPYL
SIFTCVWLARFIIYLSEPAKVFMDTFRKHQEDFYQQDIIMLANISDADQLLLNPLVESFR
ASEFVVSVAHSSYSLLKKFLQEHGLQVIQSILTEQLSLQVVDGPPRTKLQLDCRRGSLFG
EAPRNSNKEPVLYGLLSDPSLNVSSDLTGETTQASDDQAPTTEQVEDGDGEQTPVKKKKR
RDGYGAGQSCSGASSKDGQKGDSNSPALDRIPLPKLRDTFIESRQALARETSALLRGYRQ
QNSQQKPTGTSVVLYTVCNVQAGESTLAIRRGGVTCATFTDDSGWLAAGFGSGRIRVWSL
GPESLRRMLPASELAMLDKDDSRIKTKMLYDENDESHPVRDLLGHSGSVHSVAFSSDRQL
LVSGGSDGTVRLWSSLLWGGSLTVWRDHLLPVWCVCWAPVYGHYVATGGADRSAHLYATD
HAPDALRVFVGHRSDVTSVCMHPNVNYLATGSADRAVRLFDVRSGKLVRLYTGHKGSVQA
LAFSPCGRYLASGGWCGSVCIWDLGTGHQVGQLGGHSAEQPRNEDASTASADSSQWLTGP
VVTLAYNPDGSGRLAAGGLDGAVRIWDTSSGRQQRVGASSSTTTELSERPQSGLIAMHRA
TKQQISRGQSSQGQVNPNFVSYYSSVAGASVSDKCLREAFFTRRTSVLGLQYVHPYLLLA
AGPYNQM
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgtactcggttcacccatccaggcaaacgcatgacaaacccgaaagtttcggagttaag
taccagtctcttctgaggttcattgatacaattcccgatgttcacaaggtttgtttgttc
ttgcaccaatgtctacaaatttccagttggagctgtcgtctttactctatcccatatttg
tccatctttacctgcgtctggttagcgcggttcatcatttatttgtccgaaccagcgaaa
gtattcatggatacgttccggaaacatcaagaagacttctaccagcaggatatcatcatg
ctggcaaacatatcagacgcggatcagctgttactcaatccgttggtagagtcctttcgc
gcctcggagtttgtggttagcgtggcacactcctcctactcattgttgaaaaagttccta
caagaacatggtctacaggttattcagagcatattaactgaacaactttctctccaagtt
gttgacggtccaccccgcacgaagcttcaactagactgtcgtcgtggttctttgtttggt
gaggctccgagaaactcaaacaaggaacccgttctctatggtcttctgtcagatccctct
ttgaatgtttcgtctgatctcaccggtgaaaccacacaagcatcagatgaccaggccccc
acgaccgagcaagtggaagacggtgacggcgaacagacccctgtaaagaagaaaaaacgg
cgggatggctatggagctggacagtcttgttcaggagcttcgagcaaggatggacagaaa
ggcgactcgaattcccccgcactcgatcgaatcccgctacccaagttgcgtgacaccttt
atcgaatcccggcaagccctcgctcgggagaccagcgcgctgctgcgtggctatcgtcaa
cagaattcgcagcagaaaccaactggcaccagtgtggttctgtacacagtatgcaatgtc
caagccggcgaatcgacgctcgccatacggagaggtggagtgacgtgtgccactttcacg
gacgattcgggctggttggctgccgggtttggttccggtcggattcgtgtctggtctctg
ggtccagaatcacttcgcagaatgctcccagcttccgagttggccatgttggacaaggat
gattcgcgcatcaaaacaaagatgttgtacgatgagaatgatgaaagtcatccagtacgt
gacctcctcggacattctggctctgtgcacagcgtcgcgtttagttctgatcgccagtta
ctagtttccggtggctctgatggtaccgttcggctttggtccagtctactttgggggggt
tcgctcacagtttggcgtgatcacctgttgccggtgtggtgtgtctgttgggccccggtc
tatgggcactatgtggctaccggtggggccgatcgtagcgctcatctgtatgcgacggac
catgcaccggatgcccttcgcgtgtttgtcggacatcgcagtgatgtgacctcagtgtgt
atgcatccaaacgtcaactacctcgcaacagggagcgctgatcgcgccgttcgtttgttt
gacgtccgctcggggaagttggtcagactgtacactggtcacaagggttccgttcaagcc
ttagccttttctccttgcggtcgctatctggccagtggtggttggtgcggctctgtgtgt
atctgggatttgggtaccggtcatcaggttgggcaactgggcgggcattctgcagaacag
ccgcgcaacgaagacgcgtccactgcctcagcggattctagccaatggcttactgggcct
gtagtaacgcttgcctataacccggacggctcgggtcgcttggctgccggtggactggat
ggagcggttcgcatctgggatacgagtagtggacgtcaacaacgggtcggagcctcctca
tccacgactaccgagttgtccgaacggccacagtccggactgatagcgatgcatagagct
accaagcagcaaatcagccgtggtcaaagttcgcaaggtcaggtcaatccgaacttcgtc
agctattattcgtcagtagccggtgcttccgtttccgacaaatgtctacgagaggcattc
tttacccgtcgaacttcagtgctcggattgcagtatgttcatccgtatcttctgttagca
gctggaccgtacaatcagatgtga
DBGET
integrated database retrieval system
