KEGG   Opisthorchis viverrini (Southeast Asian liver fluke): T265_10890
Entry
T265_10890        CDS       T04902                                 
Name
(RefSeq) hypothetical protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ovi  Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ovi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    T265_10890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ovi03041]
    T265_10890
Spliceosome [BR:ovi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    T265_10890
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 TMEM219 EIF3I Beta-prop_CAF1B_HIR1 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WDR90_beta-prop_4th PRP4 Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_EML ANAPC4_WD40 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_Nup120_160 Beta-prop_IFT140_1st WD_LRWD1 S4 Microp_apicomplexa_4
Other DBs
NCBI-GeneID: 20325058
NCBI-ProteinID: XP_009175652
UniProt: A0A074Z4Z9
LinkDB
Position
Unknown
AA seq 923 aa
MLFPAVRLWARSLQYWSFSIQNSSVLYFGTSSTLQFAKNRKPINEELSDSDSEVEDEASE
WKSDDPFYPEDVTFNPNFRQMISHVQSLRYDKLLRVGLNLTRMAFDEALFSGRLRLNNQK
VLKKGSVLRAGDKLDMITSEDDGIACGKRSNRIRTLFVNRPPLALALITLLLCAIGLLAL
DVRVRVYELKDPDVETHWSQLLLELSKLDFCISNSTGAKTLSESLAAAERLPGKLVSNYE
TDSDQVTHSVEQHVLLYPTTFIRPGTIYAVTADMRGRHIGIKGSLALQPFHVTFELTLSE
QPQREVSGDIRPMRLISCVQLISSKKILPQRNLRGACRNHIFPPKDTSVVQYGRLEWTKR
TDVFTSNRCNGRIRLRTDFSISDELLPVLKSVGANSNFLKDIELISFHLHVIVAFLFGIV
FGTLLLYGLLSGPVSSPSLREAHTAGHINISDGERLPLETQASAAEQEAVRQMDLRKKAR
QLQVSTEDSEVKAYLRQLGEPICLFGEDGADRRERLRMLLVISGGPAQRPPLPVPATSST
AAVSGTDSSTTSFQPGKDDNTVWYHQGPASLADARLWIAEYSLNRAKQRLDKTRKHYEEM
PAALRKARLQEYHKTLNQFGLLCSQVGDVRPLSMCRFSPDGKQLATASWSGLCRVWSVPD
CELKLNLRGHTASVCSVVWHPQALTQPEQQLALASSAQDGSVKLWSLDNEEPLADIEGHA
PFRVSRVAFHPSGRFLATACFDHSWRLWDLEACEEVLHQEGHSKPVYDVVFHPDGSLALT
TSLDSFARIWDLRTGRCIMFFEGHLEELLGADIADNGYHAATASADNTVRIWDLRQQQAI
YVLPAHNNVVSSVRFEPRSANYILTSSFDKTAKLWGHPVWAPIKKLEGHNSKVVYADISP
DAQCVATCSHDLTYKLWSKNPDL
NT seq 2772 nt   +upstreamnt  +downstreamnt
atgttgtttcccgctgtcaggctttgggctcgttcgttacagtactggtctttttcaatc
cagaattccagcgttttgtactttggcaccagttcgacactccagtttgccaaaaacaga
aaaccgatcaatgaagaactttcagattctgattcagaagtcgaagacgaagcgtctgag
tggaagtcggatgacccattttatccagaagatgtcactttcaacccgaatttccgccag
atgatcagtcatgtgcagtcgctgcgctacgacaagctgttgcgtgttgggttaaatttg
acccgaatggcgtttgatgaagcattattctccggtcgtttaaggctcaataaccagaaa
gttttgaagaaaggttctgttcttcgtgcaggcgataagcttgacatgattacctctgaa
gatgatggaatagcttgcggaaaacgatcgaaccgtatccgaacactctttgtgaatcga
ccgcccttggctttggccctaatcacacttttgctgtgtgctattggtttgcttgcttta
gatgttcgagttcgggtatatgaactgaaagatcccgatgtagaaacgcattggagccag
cttctcctagagttatccaaattagacttttgtataagcaactcgactggggcgaaaacg
ttatcggagtctctggcagctgccgaacgattaccagggaaacttgtgtcaaattatgag
acagattcagatcaggtcactcattctgtggaacaacatgtcctgctttacccaaccacc
ttcattcgacccggcactatctacgccgtaacagccgatatgcgtggaagacacatcgga
atcaaaggatctctggcgttgcagccgttccatgtcactttcgaactaactcttagtgag
caacctcaacgtgaagtttcgggagatattcggccgatgcgcttgatttcctgtgtgcag
ttgatttcttcgaaaaaaattttaccccagaggaaccttcgtggagcttgccgtaaccat
atttttcctccgaaggacacctccgttgtgcagtatggccgccttgaatggacaaaacgt
acggacgttttcacttcaaatcgctgtaacgggcgtatacgactgagaaccgatttctcc
atatccgatgagcttttgccagttttgaaaagtgtgggtgctaattctaactttcttaag
gacatcgaactgatttcattccatttacatgtcatcgtcgccttcctttttgggatcgtt
ttcggaaccttgcttctctatggtctgctatcgggtccagtgtcttcgccctcgcttcgt
gaggcgcatactgccggacatattaatatcagcgatggtgaacgtctccctctggaaaca
caggctagtgctgcagaacaggaagccgtgagacaaatggatctgcgcaaaaaggctcgt
cagctccaagtttctactgaagattcggaagtgaaagcatatcttcgacaattgggtgaa
cccatatgtctgttcggtgaggatggagccgataggagagaacgcttgcgcatgctactt
gtgattagtggcggtcccgcccaacgaccaccgctcccagttcctgccacaagttcaaca
gcggccgtttcgggtacggacagtagtaccacttcttttcaaccgggtaaagatgataat
accgtgtggtatcaccaaggtcccgccagtttagctgatgctcgactgtggattgctgag
tactccttgaatcgggctaaacaaaggcttgataagacccgaaagcactacgaggaaatg
ccggcagccctgcgcaaagcccgattgcaagaatatcacaagactttgaatcaatttgga
ctactttgcagccaggtgggagacgtgcggcctttgagcatgtgccggttttctccggat
gggaagcagttggcgaccgcctcttggagtggcttatgtcgcgtatggagtgtcccagat
tgcgagctcaaactcaatcttcgtggacatacggcgtctgtgtgtagcgtagtctggcat
cctcaggccctcacacaaccggagcaacaattagcactggccagctccgcacaggatgga
agtgtcaagctctggagtctggataacgaagaacccctggctgatatcgaaggccacgca
cccttccgtgtgtctcgtgtggcttttcatccatccggccgatttcttgccaccgcctgt
ttcgaccattcttggcgtttgtgggatctggaggcgtgtgaagaggtactccatcaagaa
gggcattcgaaaccagtctacgatgtggtttttcaccctgatggctccttggctctcact
accagtctggacagctttgcccgaatttgggacctgcgaacgggtcgctgcatcatgttc
ttcgaaggtcatttggaagaacttttgggtgctgacattgctgacaatggatatcatgcg
gccacagccagtgctgataatacagttcgcatatgggatttacgacaacagcaggcaatt
tatgttctcccagctcacaataatgttgtgtccagcgtccgtttcgaacctcgttccgcg
aactacatcctgaccagctcgtttgacaagacagcaaaactctggggtcatcctgtatgg
gctccaatcaagaaacttgagggtcacaacagcaaagtggtctatgcagatatttcacct
gacgctcagtgtgtcgccacctgctcacatgatctcacctacaagttgtggagcaaaaat
cccgatttgtag

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