Opisthorchis viverrini (Southeast Asian liver fluke): T265_10890
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Entry
T265_10890 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
T265_10890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ovi03041
]
T265_10890
Spliceosome [BR:
ovi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
T265_10890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
TMEM219
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
MTRES1_C
WDR90_beta-prop_4th
PRP4
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_EIPR1
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT122_1st
Beta-prop_WDR41
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_Nup120_160
Beta-prop_IFT140_1st
Microp_apicomplexa_4
WD_LRWD1
S4
Motif
Other DBs
NCBI-GeneID:
20325058
NCBI-ProteinID:
XP_009175652
UniProt:
A0A074Z4Z9
LinkDB
All DBs
Position
Unknown
AA seq
923 aa
AA seq
DB search
MLFPAVRLWARSLQYWSFSIQNSSVLYFGTSSTLQFAKNRKPINEELSDSDSEVEDEASE
WKSDDPFYPEDVTFNPNFRQMISHVQSLRYDKLLRVGLNLTRMAFDEALFSGRLRLNNQK
VLKKGSVLRAGDKLDMITSEDDGIACGKRSNRIRTLFVNRPPLALALITLLLCAIGLLAL
DVRVRVYELKDPDVETHWSQLLLELSKLDFCISNSTGAKTLSESLAAAERLPGKLVSNYE
TDSDQVTHSVEQHVLLYPTTFIRPGTIYAVTADMRGRHIGIKGSLALQPFHVTFELTLSE
QPQREVSGDIRPMRLISCVQLISSKKILPQRNLRGACRNHIFPPKDTSVVQYGRLEWTKR
TDVFTSNRCNGRIRLRTDFSISDELLPVLKSVGANSNFLKDIELISFHLHVIVAFLFGIV
FGTLLLYGLLSGPVSSPSLREAHTAGHINISDGERLPLETQASAAEQEAVRQMDLRKKAR
QLQVSTEDSEVKAYLRQLGEPICLFGEDGADRRERLRMLLVISGGPAQRPPLPVPATSST
AAVSGTDSSTTSFQPGKDDNTVWYHQGPASLADARLWIAEYSLNRAKQRLDKTRKHYEEM
PAALRKARLQEYHKTLNQFGLLCSQVGDVRPLSMCRFSPDGKQLATASWSGLCRVWSVPD
CELKLNLRGHTASVCSVVWHPQALTQPEQQLALASSAQDGSVKLWSLDNEEPLADIEGHA
PFRVSRVAFHPSGRFLATACFDHSWRLWDLEACEEVLHQEGHSKPVYDVVFHPDGSLALT
TSLDSFARIWDLRTGRCIMFFEGHLEELLGADIADNGYHAATASADNTVRIWDLRQQQAI
YVLPAHNNVVSSVRFEPRSANYILTSSFDKTAKLWGHPVWAPIKKLEGHNSKVVYADISP
DAQCVATCSHDLTYKLWSKNPDL
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttcccgctgtcaggctttgggctcgttcgttacagtactggtctttttcaatc
cagaattccagcgttttgtactttggcaccagttcgacactccagtttgccaaaaacaga
aaaccgatcaatgaagaactttcagattctgattcagaagtcgaagacgaagcgtctgag
tggaagtcggatgacccattttatccagaagatgtcactttcaacccgaatttccgccag
atgatcagtcatgtgcagtcgctgcgctacgacaagctgttgcgtgttgggttaaatttg
acccgaatggcgtttgatgaagcattattctccggtcgtttaaggctcaataaccagaaa
gttttgaagaaaggttctgttcttcgtgcaggcgataagcttgacatgattacctctgaa
gatgatggaatagcttgcggaaaacgatcgaaccgtatccgaacactctttgtgaatcga
ccgcccttggctttggccctaatcacacttttgctgtgtgctattggtttgcttgcttta
gatgttcgagttcgggtatatgaactgaaagatcccgatgtagaaacgcattggagccag
cttctcctagagttatccaaattagacttttgtataagcaactcgactggggcgaaaacg
ttatcggagtctctggcagctgccgaacgattaccagggaaacttgtgtcaaattatgag
acagattcagatcaggtcactcattctgtggaacaacatgtcctgctttacccaaccacc
ttcattcgacccggcactatctacgccgtaacagccgatatgcgtggaagacacatcgga
atcaaaggatctctggcgttgcagccgttccatgtcactttcgaactaactcttagtgag
caacctcaacgtgaagtttcgggagatattcggccgatgcgcttgatttcctgtgtgcag
ttgatttcttcgaaaaaaattttaccccagaggaaccttcgtggagcttgccgtaaccat
atttttcctccgaaggacacctccgttgtgcagtatggccgccttgaatggacaaaacgt
acggacgttttcacttcaaatcgctgtaacgggcgtatacgactgagaaccgatttctcc
atatccgatgagcttttgccagttttgaaaagtgtgggtgctaattctaactttcttaag
gacatcgaactgatttcattccatttacatgtcatcgtcgccttcctttttgggatcgtt
ttcggaaccttgcttctctatggtctgctatcgggtccagtgtcttcgccctcgcttcgt
gaggcgcatactgccggacatattaatatcagcgatggtgaacgtctccctctggaaaca
caggctagtgctgcagaacaggaagccgtgagacaaatggatctgcgcaaaaaggctcgt
cagctccaagtttctactgaagattcggaagtgaaagcatatcttcgacaattgggtgaa
cccatatgtctgttcggtgaggatggagccgataggagagaacgcttgcgcatgctactt
gtgattagtggcggtcccgcccaacgaccaccgctcccagttcctgccacaagttcaaca
gcggccgtttcgggtacggacagtagtaccacttcttttcaaccgggtaaagatgataat
accgtgtggtatcaccaaggtcccgccagtttagctgatgctcgactgtggattgctgag
tactccttgaatcgggctaaacaaaggcttgataagacccgaaagcactacgaggaaatg
ccggcagccctgcgcaaagcccgattgcaagaatatcacaagactttgaatcaatttgga
ctactttgcagccaggtgggagacgtgcggcctttgagcatgtgccggttttctccggat
gggaagcagttggcgaccgcctcttggagtggcttatgtcgcgtatggagtgtcccagat
tgcgagctcaaactcaatcttcgtggacatacggcgtctgtgtgtagcgtagtctggcat
cctcaggccctcacacaaccggagcaacaattagcactggccagctccgcacaggatgga
agtgtcaagctctggagtctggataacgaagaacccctggctgatatcgaaggccacgca
cccttccgtgtgtctcgtgtggcttttcatccatccggccgatttcttgccaccgcctgt
ttcgaccattcttggcgtttgtgggatctggaggcgtgtgaagaggtactccatcaagaa
gggcattcgaaaccagtctacgatgtggtttttcaccctgatggctccttggctctcact
accagtctggacagctttgcccgaatttgggacctgcgaacgggtcgctgcatcatgttc
ttcgaaggtcatttggaagaacttttgggtgctgacattgctgacaatggatatcatgcg
gccacagccagtgctgataatacagttcgcatatgggatttacgacaacagcaggcaatt
tatgttctcccagctcacaataatgttgtgtccagcgtccgtttcgaacctcgttccgcg
aactacatcctgaccagctcgtttgacaagacagcaaaactctggggtcatcctgtatgg
gctccaatcaagaaacttgagggtcacaacagcaaagtggtctatgcagatatttcacct
gacgctcagtgtgtcgccacctgctcacatgatctcacctacaagttgtggagcaaaaat
cccgatttgtag
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