Opisthorchis viverrini (Southeast Asian liver fluke): T265_11430
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Entry
T265_11430 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K11600
exosome complex component RRP41
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
T265_11430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovi03019
]
T265_11430
Messenger RNA biogenesis [BR:
ovi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
T265_11430
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
T265_11430
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
20325598
NCBI-ProteinID:
XP_009176349
UniProt:
A0A074YYN3
LinkDB
All DBs
Position
Unknown
AA seq
212 aa
AA seq
DB search
MASVVGPRPCRFKGDMKPDEATLVCKYNKPPFSSTSGERRKVSNRDRSTSDFAATIEEIF
SCVVRKEKYPMSQIDIFLEVLQSDGSEFACAVNAATLALTDAGIEMRSLACAATVGMWGP
HLFADLCRFEENPRIPQLTMVCLQVVDQAGPLNPNTDNPASQPQVLHTRLTSWLPTTKLN
ALCAAAIEVTHALSLEFACWLRGRIRSELDIR
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagtggttggccccagaccttgccgattcaaaggagatatgaagccggatgaa
gccacgttggtgtgtaagtacaacaagcctccattttcatccacttccggcgaaagacgt
aaagtttccaaccgcgatcgttccaccagcgacttcgctgcaactatcgaagagatattt
tcgtgcgtagttcggaaagaaaagtatccaatgtcacagattgacatatttctcgaagtc
cttcagtcagacggttctgaattcgcatgtgcagtcaatgctgctacgcttgcgttgaca
gatgccggtattgaaatgcggagtttggcttgcgctgcaaccgttggtatgtggggacca
catttgttcgccgacctttgtcgttttgaggagaatccgaggattccccaactaacgatg
gtctgtctccaagtggtggaccaagcgggtcctcttaatcccaacacagataacccggcc
agccaaccgcaagtattgcacacgcggctcacctcctggcttcccacaacgaaattgaat
gccctttgtgctgcggccattgaagtgacacatgctctgagtctggaattcgcctgttgg
ttaagaggacgcatacgttcagaactggatatccgctaa
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