KEGG   Opisthorchis viverrini (Southeast Asian liver fluke): T265_11882
Entry
T265_11882        CDS       T04902                                 
Name
(RefSeq) hypothetical protein
  KO
K12828  splicing factor 3B subunit 1
Organism
ovi  Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ovi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    T265_11882
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ovi03041]
    T265_11882
   03036 Chromosome and associated proteins [BR:ovi03036]
    T265_11882
Spliceosome [BR:ovi03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    T265_11882
 Complex B
    T265_11882
 Complex C
   U2 SnRNP specific factors
    T265_11882
Chromosome and associated proteins [BR:ovi03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    T265_11882
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 HEAT Htt_N-HEAT_1 XMAP215_CLASP_TOG mTOR_dom UME CEP104-like_TOG Adaptin_N DUF2298 DUF688
Other DBs
NCBI-GeneID: 20326050
NCBI-ProteinID: XP_009176959
UniProt: A0A074Z1D1
LinkDB
Position
Unknown
AA seq 1307 aa
MATDGGKFIHIMVTRLFVVLGELRRPTIADREDEYRSRRRLAMISPARVDPFADGDQTPD
HRLTTYKDIMLNQQLNKEQRLLQAEIAERSKSGQLTMVADTIPTKRRRWDQSSTDVNGEA
KSDLASTPSATTPSKRWGDDSVTPSRPSATPSNAATPGSRSQWEETPGRPKDAAATPGQS
VRQWAETPAYLSGTATPGRDMPTGGALGGTPSARRNRWDETPRTERYGADTPAHGAGWAE
TPRADRTPGGVESIQDTPSSVMYGPSATPMSAATAAAVAVKRRSRWDETPLKAGATPGGT
PSHTPIAFTPSGVASVAGTPGATPSGPGASNIFTPSGTTPTGPRAMGMATPSFGSMPLPG
AGIPMTPEQLQVYAWQKEIDERNRPLTDEELDEMLPPGYKIMPPPAGYVPIRTPAHRLVA
TPTPMVGTPMGFRIATPDIGTAAGLGMNATGANAAALGDMQPKGANLPMMRPDDLQYFDK
LLQDVDEDSLPPEEAKERKIMTFLLKIKNGTPPMRKSALRQITDKAREFGAGPLFKQILP
LLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREII
SNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKS
WQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTITALALAALAEAAT
PYGIESFDSVLEPLWRGIRTHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREF
LSPDEEMKKIVLKVVKQCCATDGVEPDYIKAEILPPFFRSFWTQRMALDRRNYRQLVDTT
VEIANKVGAADIISRIVDDLKDESEQYRKMVMETIEKVMSALGSAEIDARLEEQLIDGIL
YAFQEQSTEDVVMLTGFGTIVQTLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISR
IAGVMKVCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKELL
PRLTPILKNRHEKVEENCIDLVGRIADRGSEYVSSREWMRICFELLELLKAHKKSIRRAT
VNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPGLMNEYR
TPELNVQNGVLKSLAFMFEYIGEMSKDYIYAVTPLLEDALMDRDLVHRQTAMTAVGHMAL
GVYGFGCEDALVHLLNLVWPNVLETSPHVVQAFMFAIEGLRVALGPNKILQYTLQGLFHP
ARKVRDMMWKVYNTIYIGAQDGLVYGFPRIPDSDNNTFVRHELDYVL
NT seq 3924 nt   +upstreamnt  +downstreamnt
atggcgaccgacggaggtaagttcatccacatcatggttacacgtctatttgtggttcta
ggagaactacggcgtccaacgatcgctgatcgtgaggatgaatatcgctcaaggcgtcgg
ctagctatgatttcccctgctagagtggatccgttcgctgacggtgatcagaccccggat
catcgtctcactacttataaggacattatgctcaatcagcaactgaataaggaacagcga
cttctacaagcagaaatagcagaaagaagcaagtctggacaattaacgatggtagctgac
acaattccaacaaaacggcgtcgttgggatcagtcgtctacagacgtaaacggagaggct
aagtcggacctcgctagcacaccgagtgctaccacgccgtcgaaacgctggggagatgac
tcggtcacaccttcaaggccatcggcgacacccagtaacgctgctacacctggcagtcgc
tctcaatgggaagagaccccaggccgtcctaaggatgctgcggcaacccccggccaaagt
gtcaggcagtgggctgaaactcctgcatatctgtccggtactgccactcctggtagagat
atgcccacaggcggtgccttagggggcactcctagtgcaagacggaaccgctgggatgaa
acaccacgaactgagcgatacggtgcagacactccggcgcacggagctggatgggcggag
actcctcgagcggacagaacacccgggggtgttgaatccattcaggatacaccgtcctcc
gttatgtatggacctagcgccaccccaatgtctgcagcgacggcagctgcggttgccgtc
aaacgacgctcccgttgggatgaaacaccactgaaagccggtgccactcctggtggtaca
ccttcacacacaccaatcgccttcacaccatccggtgtggcaagtgtggctggaactcca
ggtgcaactcccagcggtccaggcgcttctaatattttcacaccttccggaaccactccc
accggtcctcgtgctatgggaatggctactcccagttttggttctatgccacttccgggc
gcaggtataccgatgactcctgaacagttgcaggtctacgcttggcagaaggaaatagat
gaacgtaacaggcccctaactgacgaggagctggatgagatgctacctccaggttacaaa
attatgcctccgcctgctggatacgtgcctatcagaacacctgctcatcgccttgtcgcg
acgcccacaccgatggtcggtactccgatgggtttccgcatagccactccggacatcgga
actgctgccggtcttggcatgaacgccaccggggctaatgcggctgctttgggtgacatg
caacctaagggtgccaacttaccaatgatgcgcccagatgatttgcaatactttgacaaa
ctgttacaagatgtcgatgaagacagtctcccacctgaagaggccaaagaacgcaagata
atgacgttcctgctcaagataaagaatggtacccctccaatgcgcaaatcggctctcaga
cagattaccgacaaagcgagggagttcggagccggacccctattcaaacagatcctaccg
cttttgatgtctccgaccctggaggatcaagagcgtcatttgcttgtcaaggttatcgac
aggattttatacaaattagatgacttggtgcgaccgtacgtgcacaaaatcctagttgtt
attgaacccttgttgattgacgaagactactatgctcgcgtggaaggacgtgaaatcatt
tccaatcttgccaaggctgctggtctcgccaccatgatttccacaatgcgcccggatatt
gacaatatggacgagtacgtacgaaataccaccgctcgggccttcgcagttgtggcatct
gccctcgggattcccagtctgctgccatttttaaaggctgtttgtaagtcaaagaagtca
tggcaagccagacacaccggaatcaagattgttcaacaaatagcaattctcatgggttgt
gcaattttacctcatctgcgaagtttggttgaaattatcgaacatggtttggtggacgag
caacagaaggtcaggactataactgctcttgctctggccgccttggcggaggctgcaacg
ccttatggtatcgaatccttcgactctgtgctggaacctctatggcgtggtattcgtact
catcgtggtaaaggcttagctgccttcttgaaggctattggttacctcattccgctgatg
gatgccgaatacgcaaactactatactcgtgaagtcatgttgatccttattcgtgagttt
ctttccccggacgaagagatgaagaagattgtgcttaaggtagtgaagcagtgttgtgcc
actgatggtgtggaaccggattacatcaaggcagaaattctaccaccatttttccgctct
ttctggacacaacgtatggctttggatcgccggaattatcgtcagttggttgataccact
gtcgagattgccaataaggtcggtgctgctgacatcatctcacgcatagtagatgacctt
aaagatgagtcagagcagtaccggaagatggtaatggagaccattgagaaagttatgtct
gctttaggtagcgctgagattgacgctcgtctggaggagcaattgatcgatgggatcctc
tatgcgtttcaggaacaaagtactgaggatgtcgtcatgctgactggctttggtacaata
gtgcagacccttgggaaacgtgtgaagccctatcttcctcagatttgcggtactattctg
tggcgcttgaacaacaagtcggccaaagtccggcaacaagcagctgatctgattagccga
atagctggtgtgatgaaagtttgtcaagaagaaaagcttatgggccatcttggtgtggtc
ctttatgagtatctgggtgaggagtacccagaagtgctaggaagcatccttggtgctttg
aaggcgatcgtcaatgtgatcgggatgactaaaatgacgcctccgatcaaagaattgctt
ccacggttgactcctattctgaagaacagacatgagaaggtcgaggagaactgcatcgat
ctcgtgggtcgcatcgcggatagaggatctgagtacgtatcttcgcgtgaatggatgaga
atttgtttcgagcttcttgagttactgaaggcacacaaaaagtccatccgtcgcgccacc
gttaacacttttggatacatcgcaaaggcaatcggtcctcatgacgttctggctaccctg
ttgaacaacttgaaggttcaagaacgacaaaatcgtgtgtgcactacggttgccatcgca
attgtcgcagaaacttgtagccccttcacagtgcttccaggtttgatgaacgaatatcga
actcccgaactcaatgttcagaatggtgtactcaagtctttggcatttatgtttgagtat
atcggggaaatgagcaaggactacatctatgcggtgacacctctcttggaagacgctctg
atggacagagacttggttcaccgtcagactgcgatgactgccgtcgggcatatggctctt
ggggtttacggattcgggtgcgaagatgctctggtgcatttactcaatcttgtgtggccc
aacgtcttggaaacctccccacatgttgtacaagcattcatgttcgccattgaaggtctt
cgtgttgctttgggtccgaacaaaatactacagtacactttacagggtttgttccatcct
gcacggaaagtacgcgacatgatgtggaaagtttacaacaccatttacatcggagcacag
gacggtctcgtctatggctttcctcgcataccagacagcgataacaacacgtttgttcga
catgaactggattatgtgctgtga

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