Opisthorchis viverrini (Southeast Asian liver fluke): T265_12648
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Entry
T265_12648 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K08734
DNA mismatch repair protein MLH1
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03430
Mismatch repair
ovi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
T265_12648
03460 Fanconi anemia pathway
T265_12648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ovi03400
]
T265_12648
DNA repair and recombination proteins [BR:
ovi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
T265_12648
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
20326816
NCBI-ProteinID:
XP_009162994
UniProt:
A0A075A1T9
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
GVVAQRLEREFTDRKVHGSNPTSLSRLPLSRLGQPGNIPALMLQSGSMAPKGLIMVSESE
TTPVIPRSIEKDLELASSPPTARPIQKLSKDVINRIAAGEVIQRPANAVKELLENCLDAG
STQIQITVRAGGLKLLQVQDNGCGIQVSDLPILCERFTTSKLHEFSDLSTLSTFGFRGEA
LASLSHVSLLSVTSRTADQKCAYRMSYRNGNPSGKAAACAGNRGTTILAEDLFYNAPIRR
TAVRSPREEFARVADVVAQYAVHYAPKCGFHLRALNTGSNSTGSDLRTSAGWSRMDAVRA
VIGSAVAQNLVAFDSCQTGSADSTRLAVERLGLRYEGLLTTPSQVTSGTTPTLRLSLFIN
NRMVECTSIKRALESSYSTVLSRTLSSSPGTQSILRRSFGPTSTAFKPGGSHCSLFVYLN
LQLPPESLDVNVHPTKAQVNFLNEEQIVNGLQDAVERCLLSSAQVRSFLTRPLQLSEVSN
NRPSDTSVNEECESNRSFKPQEKVRVDVKEQCLEKFGLVSKHSPQMGHKTWDGRVSQPVN
DLVRQKSCPPSPGSPDIEEEDGEQPNSEDVIDHASTTKAFSSTDTKQATDVSPLTSRPLL
KTETPKRSLHDTSLEPLQSSTSVTFPPPPTKRRIVRLNSVLQMRERIAANADEQAKRLLR
SSKFVGLIDETRCLIQHSTDLLLARLVPLSTALFYQLMVFNFANHGEMILSEPAPVKELL
IISQSFGPTSFKSEDPSAFVQNAIQTLQSNSAMLWDYFSMKFEPDTTNGDLMLVSLPLLL
QKYIPDLTRLPIYVMRLATEVNWDEEINCFEDICRITAEFYAPVPKLSLLSTSEKLAEGT
AKIDDDVKDTSSSGQTPEVPVRWMIEHVLWPALSSSLIPGHGLLYEAPPLSQLSSQPQSA
SSQCAFFRLTRLSDLYKVFERC
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
ggcgtggtggctcagcggttggagcgcgaattcactgaccggaaggttcatggttcgaac
ccgacctctttgtctcgacttcccctttctaggcttgggcaacctggcaatatcccagcc
ctcatgcttcaatcaggtagcatggcaccgaaaggcttaatcatggtctccgagagtgag
accacaccggttataccacgaagtatagaaaaggaccttgagttggcatcaagtccgcct
acggctcgaccaatccaaaaattgtccaaagatgttatcaatcgaatagctgccggagaa
gtcatccagcggccagcaaacgccgtgaaggagctgttagaaaactgtctggatgctggt
agcacacagattcagattactgtccgtgctggtggcttgaagttgctgcaggtacaagac
aacggttgtggcatacaggtttcggatttaccaattctatgtgaacggttcaccaccagc
aagctgcatgagttctcggatttgtccactttgtctactttcgggttccgtggtgaggca
cttgctagtctcagtcacgtgtctctgctctctgtgacttcccgtactgccgatcaaaaa
tgtgcttatcgtatgtcctaccggaatggaaacccatccggcaaagcagctgcatgtgcc
ggtaatagaggaacaacgattttggctgaagatttgttctacaatgcaccgattaggcga
actgctgtgcggagtcctcgggaggagtttgctcgagttgctgacgtagtcgcacaatac
gctgttcactatgcacccaagtgtggtttccatctacgtgcgcttaacaccggttcaaac
agcaccggcagtgatcttcgtacctctgctggttggtcccgcatggatgcggttcgagcc
gtcattgggtctgcggttgctcagaacttggtcgcatttgacagctgtcaaactgggtca
gccgacagcacacgtttggcagttgagcgtctagggctgcgatatgaaggcttgctaaca
actccaagccaggtaacatcgggaaccactcccacgctccgactaagcctgtttatcaac
aatcgtatggttgaatgcacatcgattaaacgtgctttggaatcctcatattccacggtg
ctttctcgtacgctgtcatccagcccaggtacccagtccattttacgaaggtccttcggt
ccaacatcaacggctttcaaacccggtggttcccactgtagtctgtttgtatacttaaac
ctgcagttaccccctgaaagtttggacgtgaatgtgcatcctacaaaagcccaagtgaat
ttcctcaatgaggaacaaatcgtcaatggtctgcaggacgcagttgagcgctgtttgttg
tcctcagctcaagtgcggtctttcctcacccgtccactccaactttcagaagtgagtaac
aatcgcccttcagatacttcagtgaatgaggaatgtgaatcaaacagatctttcaaacct
caagaaaaggtgcgagtcgatgtgaaagaacaatgtctggaaaaatttgggctagtttct
aagcattcgcctcagatgggtcataaaacttgggacggtcgtgtttcgcagcccgtgaac
gatctagttcggcagaaatcctgtccaccatctccaggaagtcccgatatagaagaagaa
gatggggagcagccgaatagcgaagacgttatagatcatgcatctacgaccaaagcgttt
tcaagcactgataccaaacaagcaactgacgtttcacctctgacctcgcgtccgctactc
aaaaccgaaactccgaaacgttctttacatgacacatcgttagagcccctacaatccagt
acatccgtcacatttcccccaccaccaaccaaacgtcgcattgttcgcttaaacagtgtg
ctccaaatgcgagagcgaatcgcggctaacgcggatgaacaggcaaaacgcctacttcgg
tcgtccaagttcgtcggtttaattgatgagacacgttgtctcatccaacactcgaccgat
ttattgttggcacggcttgtacctctatcaacggcgttgttttatcaattaatggtgttt
aacttcgcaaatcatggagagatgatcttaagtgaacccgctcccgtcaaagaactcttg
ataattagtcaatccttcggtcctacttcattcaagtccgaggatccttcagctttcgtt
cagaatgcaatccaaactcttcaaagtaattcggctatgctatgggactatttctcgatg
aaatttgaaccagacaccacaaatggtgacctcatgttggtcagtcttcccttactccta
caaaagtacattcctgatctaacccgcttaccaatctacgttatgcgactcgcaacggaa
gtcaactgggacgaggaaatcaactgctttgaagatatatgtcgtattaccgccgaattc
tacgctccagtccctaagttgtctttactttcaacttccgaaaaactagccgagggaact
gctaaaattgatgatgatgtcaaagatacttcttcttccgggcaaacaccggaagtcccc
gttcgttggatgattgaacatgttctttggcccgctctgtcatcgtctttgattcccgga
catggacttctttacgaggctcctccccttagtcagctttccagccaaccacaatccgct
tcgtcccagtgtgctttctttcgcctcaccagattatcagatttgtacaaagtattcgag
cgctgttga
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