Opisthorchis viverrini (Southeast Asian liver fluke): T265_12762
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Entry
T265_12762 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
T265_12762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ovi03041
]
T265_12762
Enzymes [BR:
ovi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
T265_12762
Spliceosome [BR:
ovi03041
]
Complex C
Other components
Step II factors
T265_12762
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DSS1_SEM1
AAA_22
HA2_N
DEAD
AAA_19
nSTAND3
SLFN-g3_helicase
ABC_tran
AAA_30
AAA_7
T2SSE
NB-ARC
AAA_16
Flavi_DEAD
PhoH
ATPase
DUF2947
AAA_23
Motif
Other DBs
NCBI-GeneID:
20326930
NCBI-ProteinID:
XP_009163549
UniProt:
A0A075A0D0
LinkDB
All DBs
Position
Unknown
AA seq
1330 aa
AA seq
DB search
ELSEAVDRLSGSDANEPGGLFLSKKKSDFKKPQGSLLGLDKLAERKRLEGTVKELNFAKR
DQVNRDRERRVETPSNQGGVSKEFLDSRERRRERERQEKEKSGLVSTTSRKSINALPEST
VRRDIDHSVITADRESQSVRRRREAEWEDETPSHRSARGSGDDTNLSLDRFASPSDLHGA
EGRSGKQWSWDDSGFGSRGSTPKGTNFLKSDSNRERYVYTPLPTPTFKHNTWMKSPHGDR
EHHRIGRSDRPKSEHHSDHSHRSARPSTGTTRGHKHSPDNFEETEEMMVENERIDRNWYQ
MDDGYDEENNPFADIPEEYAAKKERQLAERKKRNRQKLTAQAVQVHKDNQAWEHNRMLRS
GVVQRVDFAEDEDFNEEGEARVHLLVRNILPPFLDGRIVFTRQPEPVIPVKDPDSVMAKV
AQKGSAMVRYFREQKERKRAQKKEWQLAGTRIGEVMGVKAPEEPEDRWTEDSHRQTQTFA
DKVGDMKSEAVSDFATQKTLSEQRQYLPVFSVRSSLLRMIKEHQIVVIVGETGSGKTTQL
TQYLHEDGYTTYGMVGCTQPRRVAAMSVARRVAEEMNTRLGDEVGYAIRFEDCTSPKTLI
KYMTDGILLRESLRESDLDPYSAIIMDEAHERSLNTDVLFGLLRDVVSRRNDLRLLITSA
TMDAERFAQFFGDCPTFRIPGRTFPVDLQFSKTTVMDYVDAAVKQAIQVHLGSPIDGDIL
IFMPGQEDIEVTCELIAERLGNLEEAPPLSILPIYSQLPSDLQAKIFMKAENGVRKCVVA
TNIAETSLTVDGIRYVIDTGYCKLKVFNPKIGMDALQVFPISQANANQRAGRAGRTGPGV
CYRLYTIGQFQEEMLFTAVPEIQRTNLANVVLLLKSLGVQDLMRFHFMDAPPQDNILNSM
YQLWIFGALDNTGSLTNLGRQMVEFPLDPALSKLLITSCDMDCSEEILTIVSMLSVPSVF
YRPKGREEESDNAREKFQVPESDHLTLLNVFTQWRKSSYSAGFCARHFLHLKAMRKVREV
RQQMKEIMEQHNMNLRSIRSDWDVVRECLCATFFHQAARIKGLGEYVNLRTGMPCHLHPT
SALYGMGYTPDYVIYHELVMTTKEYMQCVTSVDGTWLAKMGPMFYSVKDPNLTRLERKRQ
AEEQLAEMEREMRLAEEQISRRREELTASISSSRFLSILPAPNRYPGHADSRDPSCFKTS
GRTNGPVTTPDITDLYSVLCTKMYMPYLNIFPFLWFRLFPVQLVGSQPYQLQDPEPNEQD
TKQVEEALGILKDDKEFEEFEKEDWTNEEEDTSDLKVWDYKWDTDGDTNDQFTEFLRTEL
MKLDFEVPQN
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
gaactctctgaagctgtagatcgactttcaggatccgatgcaaatgaacccggcggttta
tttctcagcaagaaaaagtcggatttcaagaaaccacaaggatcattactaggtctggat
aagttggcagagaggaagcgacttgaaggtaccgtgaaggagttgaactttgcaaagcgt
gatcaagttaaccgtgacagggaacgtcgtgtcgaaacaccttccaatcaaggcggtgtc
agtaaagaatttctggattctcgagagcgtagacgcgagcgggaacgccaagaaaaagag
aaatctggtctcgtctcgacaacttcccggaagagcataaatgctcttcctgaatcaaca
gtacgcagggacattgatcattctgttatcactgcggatcgggaatcacaaagtgtgcgg
cgccgcagagaagctgagtgggaggacgaaacaccgtcacatcgcagtgcccgtgggtct
ggtgatgataccaacttgagtttggatcgctttgcttctccatccgatttgcatggagct
gaaggacgctccggtaagcagtggagctgggatgactccggattcggcagcagagggagc
actccgaagggtactaactttctaaaatcggactccaatcgcgaacggtatgtttacacg
ccgctacctactcctactttcaaacataacacgtggatgaaatctccccatggtgaccgt
gaacatcatcgtataggtcggtcagatcgtcccaagagtgaacaccattccgaccattca
catagatccgcaagacctagcactgggactactaggggacacaaacacagtccggataat
ttcgaagaaaccgaagagatgatggtggagaatgaacgcattgatcgcaactggtaccaa
atggatgacggttacgatgaggaaaataatccgtttgcagatatccccgaagaatacgcg
gctaaaaaggagcgtcagcttgctgaacgaaaaaaacgcaatcgacagaagctgacggct
caggcagtccaggttcacaaggacaaccaagcttgggagcacaaccgaatgttacgttcc
ggtgtggtccagcgtgttgattttgcagaagatgaagactttaacgaggaaggcgaagca
cgtgtacatttactagtgcgtaatatacttcctcccttcctcgacggtcgaatagtgttc
acacgacaacctgaaccagttattcctgtcaaggaccctgattcagtgatggcaaaagtt
gctcagaaaggtagtgcaatggtgcgctattttcgtgaacaaaaagagcgcaagcgggca
caaaagaaagaatggcagctggctggaacacggattggtgaagtaatgggagtgaaggct
cctgaagaaccggaggaccggtggactgaggactcgcatcgtcaaacacaaacgttcgca
gacaaagttggtgacatgaaatcagaggctgtaagtgacttcgccacacagaagacactc
tctgagcaaagacagtatttgccagtgttctctgtgcgttcatctttactgagaatgata
aaagaacatcagatagttgttattgtcggggagactggcagtggcaaaaccacacaactg
acgcagtatctgcatgaagatggctacaccacatatggcatggttggatgtacacagcct
cgacgtgttgctgctatgtcagtggcacgtcgcgttgcagaagaaatgaatacacggctg
ggtgacgaagtgggttacgcgattcgatttgaagactgtacttcacctaaaacactgatc
aagtacatgacggatggtatacttctgcgtgagtctctccgcgaatccgatctggatccc
tattcagctatcatcatggatgaagctcatgagaggtcgctcaacaccgacgttttattc
gggcttcttcgtgacgttgtaagccggcgcaatgatttacgcctattaattacatcggca
accatggatgcagagcgctttgcacagttttttggagactgtcccacctttcgaattccg
ggtcgcacatttcctgtggacttgcagtttagcaaaacgaccgtaatggattacgtagat
gctgctgtgaaacaggctattcaagtccaccttggatcaccgattgatggtgacatacta
atattcatgcctggccaggaggatatcgaagttacctgtgaactcattgcagaacgcttg
ggaaatcttgaagaggccccaccactttcaatactacccatctactcacagttaccgagt
gatttacaggcgaagatattcatgaaagcagaaaacggtgtccggaaatgtgtggtggcc
actaatatcgctgaaacctcactaacggttgatggaatacgctatgtgatagacacggga
tactgcaaattgaaagtatttaatccgaagattggtatggatgcattgcaagttttcccc
atcagtcaggctaacgccaatcaacgggctggccgagccggtagaactgggcctggagta
tgctatcgtctttacacaatcgggcaatttcaagaagagatgctgttcacagctgttcct
gagatccagcggacaaatttggctaacgttgtgcttttgttaaaatcactcggagttcaa
gatttgatgcgatttcattttatggatgctcctccacaagacaacatcctcaactccatg
tatcagctgtggattttcggtgctttggataacactggtagtctgaccaacttgggacgc
cagatggtagaattcccactcgacccagccttgtcgaagttgctcatcacatcctgcgat
atggactgctctgaggaaattctcaccattgtgtccatgctatctgttcccagcgtattc
tatcgtcccaaaggacgtgaggaagagtccgacaacgcgcgcgaaaagttccaagtcccc
gaatcggatcatttaaccttgctgaatgtgttcactcaatggcgcaaatcaagttattcg
gccgggttttgtgctcgacactttttgcacctgaaggcgatgcgaaaagtgcgagaagta
aggcagcaaatgaaagagattatggagcagcacaatatgaatctacgctcgatcagaagt
gattgggatgtagtccgcgaatgtctttgtgccacattctttcaccaggccgctcgaatc
aagggcttgggagagtatgtgaatttgcgcaccggaatgccgtgccacttgcatcccacc
agtgccctgtatggaatgggttacactccggactatgtgatttaccatgaactggtcatg
accacaaaggagtacatgcaatgtgtcacttctgtggatggcacctggctcgccaaaatg
ggtccgatgttttacagtgtcaaagatcccaatctcactcgcttggaacgcaagaggcaa
gccgaagaacaactggctgaaatggaacgcgaaatgcgattggccgaagaacaaatatct
cgtcgacgagaggagcttactgcttcgattagctccagtcgatttttatcgatactacca
gcgcccaatcgctaccccgggcatgcggactccagggaccccagttgtttcaaaacgtcc
ggcaggacgaatgggcctgtgacaacgccagatatcactgacctgtactcagtcctttgt
acaaaaatgtatatgccttatctcaatatatttccattcttatggtttcgcttgtttccc
gtccaactcgttggttcgcaaccatatcagctccaggatcctgaaccaaatgaacaagat
acaaaacaagtggaggaagcgcttggcatattgaaagatgataaagaattcgaggagttc
gagaaagaagactggaccaatgaggaggaagatacttctgatttgaaggtttgggattac
aaatgggacacagacggagacacgaacgatcagttcacggaatttttgcggacggaactg
atgaagctggattttgaagtcccacaaaactaa
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integrated database retrieval system
