Opisthorchis viverrini (Southeast Asian liver fluke): T265_12991
Help
Entry
T265_12991 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
T265_12991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovi03019
]
T265_12991
03041 Spliceosome [BR:
ovi03041
]
T265_12991
Messenger RNA biogenesis [BR:
ovi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
T265_12991
Spliceosome [BR:
ovi03041
]
Complex B
Other components
Prp19-related factors
T265_12991
Complex C
T265_12991
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
Suf
TPR_15
TPR_2
NRDE-2
Mad3_BUB1_I
ARM_TT21
LTN1_E3_ligase_6th
KH_N4BP1_2nd
TPR_1
Motif
Other DBs
NCBI-GeneID:
20327159
NCBI-ProteinID:
XP_009164929
UniProt:
A0A075AIA9
LinkDB
All DBs
Position
Unknown
AA seq
1168 aa
AA seq
DB search
EDEYVVIEEQDRPYEEDLLRNPHNIKSWLRYIEMKSKSPPKVLYMLYERALKQLPGSYKL
WYRYLRLRRIHARRLCPGSILHEETNNAHERALVTMHKMPRIWTDYLLFLMSQGFITRTR
RTFDRALKALPVTQHDRIWGIYLRFADKHGSGIGETCLRIYRRYVKFAPDDMERFVEFLV
GIGNANEAALVLADIINDDNFVSRQGRSKFQLWQQLCSLLVKNPSKVAALKPDPIIRQGI
SKYTDQVGLLWNSLADYHIRCGNLLRARDVYAEALNTVMTVRDFTQVFDAYAEFEESVAK
AKMEALDKSQNTSEEVQFLRSFILVQEEQDRPYEEDLLRNPHNIKSWLRYIEMKSKSPPK
VLYMLYERALKQLPGSYKLWYRYLRLRRIHARRLCPGSILHEETNNAHERALVTMHKMPR
IWTDYLLFLMSQGFITRTRRTFDRALKALPVTQHDRIWGIYLRFADKHGSGIGETCLRIY
RRYVKFAPDDMERFVEFLVGIGNANEAALVLADIINDDNFVSRQGRSKFQLWQQLCSLLV
KNPSKVAALKPDPIIRQGISKYTDQVGLLWNSLADYHIRCGNLLRARDVYAEALNTVMTV
RDFTQVFDAYAEFEESVAKAKMEALDKSQNTSEEDELDVELHLARLEALMDKRPLLLNSV
LLRQNPHNVSDWLKRVELVKPQGAREQINTFMEAITSVDPAKATAGRPSALWVGLAQLYE
KHKQLDDARVVFQKATGVTFVHVEDLASIWCEWAEMELRNDRPEEALRLLGKATTAPPRK
VDYYDRSEPVQARLHKSLRVWTLYTDLEESFGTFETTKAAYDHMIDLRIATPQIIMNYAL
FLEEQNYFEEAFKAYEKGVALFRWPNVYDIWAAYLAKFIERYGGTKLERARDLFEQCLEK
CPPKFAKALYLLYARLEEQHGLARRAIRIYERATEAVLPGERFDMFNIYIQRIADLHGVT
HTRSAYEQAIERLPEEHARQMCLRFADLERKLGEIDRARAIYAYCSQMCDPRTEPQFWQV
WKEFEVAHGNEDTLREMLRIRRSVQATYNTRVSFMASQLQITGADGTEQATPTNEMQKLD
KAHSDANKPQLAGRPVVVFQSAGVRQLGLDAQDQTRSVTTNKEAINIDDIGADDADDGDE
EAAQDDADLELNLEKQPVPLAVFGGLKE
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
gaggatgaatacgtcgtgattgaagaacaggatcgtccatatgaggaggatttactgcgc
aatcctcacaacatcaaatcttggctgcgatatattgagatgaaatcgaaatcacctcca
aaagttttgtatatgctttatgaacgtgcgttaaaacagcttcctgggagctacaaacta
tggtatcgttatctgcgattacgacgcatacatgcccgtcgtttgtgtcctggtagcatt
ttgcacgaagagaccaataatgctcacgagcgtgctctggttactatgcacaagatgcca
cgtatttggaccgactatctccttttcctgatgtcgcaaggtttcatcactcgcacccgc
cgcacttttgaccgggccctcaaagccctgccagtcacacaacatgaccgtatttggggc
atttatctacggtttgcggacaagcacggcagtgggataggtgagacgtgtttgcgcatt
tatcgccgctacgtcaaattcgccccggatgacatggagcgttttgtcgaattcctggtt
ggtattggaaacgcaaatgaggccgccttagttctggctgatatcatcaacgatgacaac
tttgtcagccgtcaaggccgttcgaagttccaactttggcaacagttatgcagtttgttg
gtgaaaaacccgtcgaaggtggctgcgcttaaacctgacccaatcattcgacaagggata
agtaaatatactgaccaggtcggtttgttgtggaactccctggctgactaccacattcgt
tgcggtaaccttctgcgcgccagggacgtgtatgcggaagccctcaatacagtgatgacc
gtacgtgacttcacccaggtatttgacgcttatgccgaattcgaagagtcagtggctaag
gcgaaaatggaagccttggataaatcgcaaaatacttcggaagaagttcaatttcttcgt
agtttcattcttgttcaggaagaacaggatcgtccatatgaggaggatttactgcgcaat
cctcacaacatcaaatcttggctgcgatatattgagatgaaatcgaaatcacctccaaaa
gttttgtatatgctttatgaacgtgcgttaaaacagcttcctgggagctacaaactatgg
tatcgttatctgcgattacgacgcatacatgcccgtcgtttgtgtcctggtagcattttg
cacgaagagaccaataatgcccacgagcgtgctctggttactatgcacaagatgccacgt
atttggaccgactatctccttttcctgatgtcgcaaggtttcatcactcgcacccgccgc
acttttgaccgggccctcaaagccctgccagtcacacaacatgaccgtatttggggcatt
tatctacggtttgcggacaagcacggcagtgggataggtgagacgtgtttgcgcatttat
cgccgctacgtcaaattcgccccggatgacatggagcgttttgtcgaattcctggttggt
attggaaacgcaaatgaggccgccttagttctggctgatatcatcaacgatgacaacttt
gtcagccgtcaaggccgttcgaagttccaactttggcaacagttatgcagtttgttggtg
aaaaacccgtcgaaggtggctgcgcttaaacctgacccaatcattcgacaagggataagt
aaatatactgaccaggtcggtttgttgtggaactccctggctgactaccacattcgttgc
ggtaaccttctgcgcgccagggacgtgtatgcggaagccctcaatacagtgatgaccgta
cgtgacttcacccaggtatttgacgcttatgccgaattcgaagagtcagtggctaaggcg
aaaatggaagccttggataaatcgcaaaatacttcggaagaagacgaattggatgtggag
ctacatctcgcccgactagaagctcttatggataaacgcccactccttctgaacagcgtt
ctgttgcgtcagaatcctcacaatgtttccgattggttgaaacgcgttgaactcgtaaaa
cctcaaggagcgcgcgagcaaatcaatacattcatggaagccataacctcggtggacccg
gcgaaggctactgctggacgaccatcggcgttgtgggtcggtctggcccaactctacgag
aaacataaacagctggatgatgcacgggtcgtgtttcagaaagcaaccggcgtcacattt
gttcatgtggaagacttggcatcgatctggtgcgaatgggcagaaatggaacttcgcaat
gatcgtccggaggaagccctgcgacttctcggcaaggcaacaacagcacctccacgcaaa
gttgattactatgatcgatcagaacctgtgcaagctcggctacacaagtctcttcgagtg
tggaccctctatacagacctcgaagagagtttcgggacatttgaaaccaccaaggctgcc
tatgatcatatgattgaccttcgaatcgccactccacaaattatcatgaactacgccttg
tttttggaggaacaaaactattttgaggaagccttcaaggcctatgaaaaaggagttgca
ttgtttcgttggcctaacgtctacgacatttgggcagcatatttggccaagttcattgag
cgttacggtggaaccaaactggaacgcgctcgtgatttgttcgaacaatgcttggagaaa
tgtccccccaaatttgccaaagcactctatctgctttacgcgcgactggaggagcaacat
ggtttggctcgtcgtgcgattcgtatctacgaacgagccaccgaggctgtgctgcccggc
gaacgctttgatatgtttaacatctacattcaacgaattgctgacctacatggtgttaca
cacacacggtcagcttacgaacaagcgatcgaacgactcccagaggagcatgcccgtcaa
atgtgccttcgatttgctgatttggaacgaaaattgggcgaaattgaccgagcacgagcc
atttacgcctactgctcccaaatgtgcgatccgcggacagaacctcagttttggcaagtc
tggaaagaatttgaggtggcccacgggaacgaggataccttgcgtgaaatgttgcgcatc
cgacgtagtgtgcaggccacttacaacacccgcgtcagttttatggccagtcagcttcaa
atcactggtgctgatggaacggaacaggctactcctacgaacgagatgcagaaactagac
aaggcgcattccgatgcgaacaagccgcagttggccggtcgtccagttgtcgtcttccaa
tcggccggagtccgacagcttggcttggatgcccaagatcagacacgttccgtaaccacg
aacaaggaggccatcaatatagacgatattggcgcggacgacgcagatgatggggatgag
gaggcggctcaagatgatgctgacttggaactgaacctggagaaacaacctgtgccgctt
gcagtattcggtggcctcaaagag
DBGET
integrated database retrieval system
