KEGG   Opisthorchis viverrini (Southeast Asian liver fluke): T265_13041
Entry
T265_13041        CDS       T04902                                 
Name
(RefSeq) hypothetical protein
  KO
K14004  protein transport protein SEC13
Organism
ovi  Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03013  Nucleocytoplasmic transport
ovi04141  Protein processing in endoplasmic reticulum
ovi04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:ovi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    T265_13041
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    T265_13041
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    T265_13041
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ovi03019]
    T265_13041
   04131 Membrane trafficking [BR:ovi04131]
    T265_13041
Messenger RNA biogenesis [BR:ovi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     T265_13041
Membrane trafficking [BR:ovi04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    T265_13041
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    T265_13041
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    T265_13041
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_TEP1_C WDR55 Beta-prop_WDR35_TULP_N Beta-prop_WDR90_POC16_2nd WD40_Gbeta Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_NOL10_N Beta-prop_EML EIF3I DSE1_N Ge1_WD40 PAC11 Beta-prop_SPT8 WD40_RFWD3
Other DBs
NCBI-GeneID: 20327209
NCBI-ProteinID: XP_009165149
UniProt: A0A075A665
LinkDB
Position
Unknown
AA seq 401 aa
APLAPSSRWILDRDWLLDPDFRVIEARFDAAPSLPDLLVNRVRGRLIMVGTQTIETNHED
MIHDAQLDYYGTTLATASSDESIKIFDVRNKKQVLVAHLREHQGPVWGLSWSHPMYGSLL
ASCGYDRKVIIWQEQNGRWGKIHEYTEHASSVNCVSWAPHPYGLMLACASSDGTISILTS
DGSNNWHAVRIPNAHSIGVNSVSWAPAINADFMLNPSSINSVNPLIKRFVSAGSDSLIKI
WREDTASGTTEWIEETRLEGHSDWVRDVAWAPSLNVARQMIASCGQDGRVIVWVSVGLDE
PGAVHMGATVDPKDYVHRPGGTSWSPVVLNTYADVVWHVSWSITGNILAVSGGDNKVTLW
KQTLEGGWIALSEISRGHGGPASLLGMDEPSQLSMPPVASG
NT seq 1206 nt   +upstreamnt  +downstreamnt
gcgcctttggcacccagcagtcgatggatactggatcgtgactggttgttggatccagac
tttcgggtaattgaagcccgctttgatgctgcaccatcattgcccgatcttttggtcaac
cgcgtgcggggtaggcttattatggtcgggacacaaaccatcgaaacaaaccatgaggac
atgattcatgatgcccagttagactactatggaaccacacttgcaacagcttcttctgat
gagtcaattaaaatctttgatgtgcgcaataaaaagcaagtactcgtggcacaccttcgt
gaacatcaaggacccgtttggggattgagctggtctcatccaatgtacggcagcctgctc
gcctcttgtggatacgaccgtaaagtgatcatctggcaagagcaaaatggtcggtggggg
aaaatccacgaatataccgaacacgccagttctgtaaactgtgttagctgggctcctcat
ccctacggactgatgttggcttgcgccagttcggatggtacaatatcaattctcacttca
gatggtagcaacaactggcatgcagtccgtattccaaacgcccattcgatcggtgtaaac
agcgtttcctgggcccctgcaataaacgccgactttatgctcaatccatcgtctataaat
tcagtaaatccgctgatcaagcggtttgtttcggccggaagtgactcgctaataaaaatt
tggcgtgaggataccgcctccggaaccacagaatggatcgaagaaacccgtctagagggc
cattccgattgggttcgcgatgtcgcttgggcaccgagtttgaatgtggctcgtcaaatg
atcgcttcctgtggtcaagacggacgcgtaattgtgtgggtatctgtgggtctggacgaa
cctggtgctgtccacatgggtgcaacagtggatccgaaagactatgtgcaccgcccgggc
ggaacaagttggtctccggtcgtattaaatacatatgcagatgttgtttggcatgtgtcc
tggtccatcacgggtaatatcttggctgtttccggtggagacaacaaagtcactttatgg
aagcaaactcttgaagggggatggattgcgctgagtgagatttcgcgcggccatggtggg
ccggccagtctattaggcatggatgaaccaagtcagctatccatgccgcctgtggcatca
ggctag

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