Opisthorchis viverrini (Southeast Asian liver fluke): T265_13168
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Entry
T265_13168 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K18735
protein SMG9
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovi03019
]
T265_13168
Messenger RNA biogenesis [BR:
ovi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
T265_13168
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dynamin_N
MMR_HSR1
ABC_tran
Motif
Other DBs
NCBI-GeneID:
20327336
NCBI-ProteinID:
XP_009165802
UniProt:
A0A074ZX22
LinkDB
All DBs
Position
Unknown
AA seq
810 aa
AA seq
DB search
MNSNCDFENGTMDQKSAPVKSILDFFSNPLEPTELIDAENDVDELYALCDDPMQIPVKLI
DDQFRFADLSSIQDLFVENSGFLVVSAIGMQSTGKSSLLNVLANQLTPDTGLIDGPFVVQ
SMKNLVTNSPQTGGIDLYITQDRIILLDAQPLLSFALTNYHSQSSTAQRSDRVDIAPLGL
GDSASSTCTLFGPGNWSLDVWPEMASLQIITFLLNVCHVLLVVTDNLSTAPSQLYRLIDR
AAALKPTVYTPSVLPHSAFVTVLSQTNRRGSGLPNGIATKHQNARHQVQASKLVSAAGSD
VLQRDVELNGAYQQPQSEDDDEADDTVGEQPRSAGVGSDGLLASVGPTGLLHTRSQDAGQ
PLESESGDVVDALNRLKTLTDYSASLIHVYNQAPAAAFLDPVVRQRLRMFRQQLLPMLFP
GYRRLAALIGVGPQILSAHLASRSRTQVPVATLQTTEENVRQPLMSSGGLKVGEGHVIGT
DVGDSCGAIDARNPSICLSASDPSIGGIGMREDGHPASSLQLSSAHELHSGQTPLGSEVA
ADERLSDKVVLADSSPLTDEVAPQIPELQEQPSVEGHSHAPREQECRLLQSQSSIATGQD
TPAQPTSGDPPVLAITESQSGHRPIPCCPVNAGSSSSATQPPLSDAKEADVAAECYPILQ
AVEAELRGLLCRVPRLAIDPSSQLTTGGSELYGASADHPSLWDGERQNAEMANMTHQVQS
VRRRFFNIQRRLDHPRMFLIPVVDDEGNSPVGCPTYSASVKSLQEAILSTPRQHMMPKLT
EKKWILYAQKMWETVLTSPILSDYHSVLST
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgaattctaactgtgactttgaaaacggtactatggatcaaaagagtgcacctgtcaaa
agcatattggatttcttcagcaaccccttagagcctaccgaactcattgatgctgaaaac
gatgtggatgagctttatgcgctttgcgatgacccgatgcaaataccagttaaacttatt
gacgaccagttccgctttgctgatcttagctccatacaggatctcttcgtggaaaatagt
gggtttctagtggtcagcgcgattggaatgcagtctaccgggaagtctagtttgctgaat
gttttggccaaccagttaactcctgataccggtctgattgatggcccgtttgttgtacag
tccatgaagaacttggtgaccaacagtccacaaacgggtggaattgatttatatattaca
caagatcggatcattttgctggatgcacagcccctcctttcattcgctctgacgaattat
catagtcaaagttcaacagctcaacgttccgatcgagtcgatatcgctcccctgggtttg
ggtgattctgccagttctacgtgcaccttatttggtccgggcaactggtctctggacgtt
tggccggaaatggcatcccttcagatcattacgttcctcctcaacgtttgtcatgtgctt
ctggtggtcactgataatctgagcacagctccatctcagttataccgtctgattgatcgt
gccgccgcgctgaaaccaacagtctacacaccgtctgttctcccacattctgcatttgtc
accgttctgtcgcaaacaaaccgtcggggaagcggtctacccaatggcatagcaaccaaa
caccagaatgcacgacatcaagttcaagcatctaaattggttagtgcagctggatcggat
gttctccagagggacgtggaactcaatggagcatatcaacaaccgcaaagtgaagatgat
gatgaggcagatgacacagttggtgaacaacccagaagtgctggagtaggctctgatggt
ttgctagcatcggtgggaccaaccggtttgttgcacactcgaagtcaagatgctggacag
ccccttgagtcggagtctggtgacgtggtggacgcactcaacagactcaaaacccttact
gactattcagcatcactaattcacgtgtacaatcaagcacctgctgccgctttcctggat
cctgttgtacgccagcgactaagaatgttccgccaacaattgcttcccatgttatttcct
ggttatcgacgtctggctgcactaatcggagttggaccgcaaatcctttcggctcatctc
gcctccaggtcccgtactcaggttccagttgcgacacttcagacaacagaggagaatgtg
cgccaaccgctcatgtcttctggtggattgaaggttggagagggtcatgttattggtaca
gacgtaggagacagctgtggtgcgatagatgcccgtaatccatcgatttgtctttcggct
tctgatccttccattggtgggattggaatgcgtgaggacggtcacccggccagttcactc
cagctatcctctgcccatgaactgcacagtggtcaaacaccgttaggatcagaagtcgct
gcagacgagcgtctttcagacaaagtcgtcttagcggattcttctccactcactgatgag
gtggctcctcagatacctgagcttcaggagcaaccttctgtagaaggccattcacatgct
cctcgggaacaagaatgtcgactcctccaatctcagtcctctatcgcaacgggtcaggat
acacctgctcagcccacttccggggacccacctgtgctagcaatcacggaatcccaaagt
ggccaccgacctataccatgttgtccagttaatgcaggttcgtcaagcagtgcaacacag
cctcctttgtctgatgccaaagaggctgatgtagcagctgaatgttatccaattctacag
gccgttgaagctgagttaagaggcttgctttgtcgtgttccgaggttggcgatcgatcca
tcttctcaacttactacgggcggcagtgaactctacggtgcttcagcggatcatcctagc
ctgtgggatggggagcgtcaaaatgcggagatggcgaatatgactcatcaagtccagtca
gtacggcgacgcttctttaacatccaacgtcgtttggatcatccacggatgtttctcatt
cctgtcgttgacgatgagggtaattcccctgttggttgcccaacttattctgcctcagtc
aaatccttgcaagaagcaattttatccacgccgaggcaacatatgatgccgaaattgacg
gaaaagaaatggattttgtatgcacagaaaatgtgggaaaccgttttgacctctcctatt
ttatctgactatcattctgtattatcgacctaa
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