Opisthorchis viverrini (Southeast Asian liver fluke): T265_13360
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Entry
T265_13360 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K12587
exosome complex component MTR3
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
T265_13360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovi03019
]
T265_13360
Messenger RNA biogenesis [BR:
ovi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
T265_13360
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
20327527
NCBI-ProteinID:
XP_009166816
UniProt:
A0A075A1J9
LinkDB
All DBs
Position
Unknown
AA seq
287 aa
AA seq
DB search
MPIECFKLPSEAVDLEVFTEKKISRESDFPPAIFFSLGLNPSADGSSYLEYGSIKACCSV
NGPLEMRQDGQLITALKFAPFITWQQPDQQTGVERRLSQLLLSSIEASVMLMRQDGQLIT
ALKFAPFITWQQPDQQTGVERRLSQLLLSSIEASVMLHCFPRGKYEVMVLILDNGGFPVD
SINTGDCLAAAITCSGLALTDASVQMYDTPVGVNVDLSTVVRPSSSVGHLCAAILPNLQQ
YSMLYTSDSCIRTGQDLREALSCAMNGGVQLATTIKQCLVRQTNTTA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcctatcgagtgcttcaagctaccctctgaagcggtagacctagaggtgtttactgag
aaaaagatttccagggagtcggacttcccacctgcaatatttttctcacttggactgaat
ccttctgctgacggttcctcatatcttgagtatggttcaatcaaggcatgttgctcagtc
aatggtccactagaaatgcgacaagatggtcagttgatcactgccttgaagttcgcacca
tttataacctggcagcaacctgatcaacaaaccggtgttgaaaggcgcctcagtcagctc
cttctgagttcaatcgaggcctctgtgatgcttatgcgacaagatggtcagttgatcact
gccttgaagttcgcaccatttataacctggcagcaacctgatcaacaaaccggtgttgaa
aggcgcctcagtcagctccttctgagttcaatcgaggcctctgtgatgcttcactgtttc
ccacgcggaaagtacgaagtgatggttctgatcctggacaatggcggcttcccagtcgat
tctatcaatactggtgactgcttggccgcagcaataacatgttcaggactggccttaacg
gatgcgagcgttcaaatgtatgacacacccgtcggagtcaatgtggacctttcaaccgtc
gtacgacctagtagcagtgttggacatctgtgtgcagctatcctacccaatcttcaacaa
tactccatgctctatactagtgacagttgcattcgcacaggtcaggacctgcgtgaagcg
ctgagttgtgcaatgaacggtggggttcagctggctaccaccattaaacaatgtctcgta
agacagacaaacactaccgcatga
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