Opisthorchis viverrini (Southeast Asian liver fluke): T265_13439
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Entry
T265_13439 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
T265_13439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ovi03000
]
T265_13439
03021 Transcription machinery [BR:
ovi03021
]
T265_13439
Transcription factors [BR:
ovi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
T265_13439
Transcription machinery [BR:
ovi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
T265_13439
RNA polymerase III system
TFIIIB
T265_13439
RNA polymerase I system
SL1/TIF-1B
T265_13439
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
20327606
NCBI-ProteinID:
XP_009167120
UniProt:
A0A074ZTQ0
LinkDB
All DBs
Position
Unknown
AA seq
883 aa
AA seq
DB search
VRKSRTTRLATENLVGPEVKRNYQNQLLECLRDGIVWGINDHWGEISQALLKAGMSVRGT
TQLTSSKHWIPDRTGSLLETRRQIPPGRHHNSTRRIIRRQVKLSIHADREAWWTRQVEEM
EDAKNAGNVRRLFHLIHSTVSEIIRDQNGSPIFSKAARLDRWAQYFEQQSSWPHATSNPE
SWFSVESMSVDNEAKGAEDEAPTGLSDSADFLDFLNSSDTEPDDSKSAQPENFEANSDHE
SVNGDSPSLTLSITNVVVMASMRCHLRLKEIARSSVDVEYKALQNHVIMRLRSPYTVATI
WSSGKIWCTGANSLAKAKTGARRIARRIAKCGFPCRFSKYRVVNIMATCHLPFRVRLEEL
VKEKPMQMCYEPELAPGLTFKTDLNSSTLLKVFSTGRVVIMGPSLDAISDLVEELVPLAA
LHQTDEPVSDSDDEESKQHKTARVRAEAAAARRMLFLPGELPMDALGYVDDEDEYDINDE
GDGLGGYSTDDSTDSGASVDSEGVSSRTKRHDRSRTLGRPSNPIYDLQCKNPPAPPRPMS
LRESMDFAFCKRAAGDVDGARGAIAAAADLRREQESQPQVLSSKPSHAKFAPRPVKALPS
STDPTWSKKTVASGSTKRACVVTYSGTEDSGDTNFDSVTSASIHPPPSTLQQSNPAVRVL
PSTSISPTTTVVPAACLPQAIVTGYPPTSAPAQTQYVIVTAAQSLSQSTLVHTSPATQST
AVQVIHHSVPTAQRQVFRLAQPPVLGLSGQNGCTIPSTVYPIRAPPPAAGVQAATVLPTV
GAKFVNYGPTPNSGAGPFLSLKCVSSAPTYQLVQPSPINGPVFMGTTFYQQPMQLAGGVP
VTGGGMFLNPMSTAVVAMGTPVHPSLVNTPMPQSFLTNQQSHL
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
gtacgcaaatcgcgcacaactcgcttagccactgagaatttagtgggcccagaagtcaaa
cgaaactatcagaaccagctcctcgaatgcctgcgggacggcattgtgtggggtataaac
gaccactggggagaaatatcccaagcgctactcaaagccggaatgtctgttcgcggtaca
acccagctaacatcatccaagcattggatccccgataggaccgggtctttgctggagacc
cggcgacagattcctcctggccgccaccacaactccacgcggcgcatcatccgacgccag
gtgaaattgagtatccatgccgaccgagaagcttggtggacccgacaggtcgaagaaatg
gaagatgcaaaaaatgctggaaacgtgcgtaggctgttccacttgattcattcaactgtc
agcgaaataatcagggaccaaaatggctccccgatattcagcaaagcagcacgtttggac
cgctgggcacagtatttcgagcagcaatccagctggccacatgctacctccaatccagaa
tcctggttttcagtagaaagcatgtccgtggataatgaagcaaagggtgcagaagatgaa
gcgccgacgggactgtctgattcagccgattttcttgattttttaaattcctcggatact
gaacctgatgactcgaaaagcgctcagcctgaaaattttgaagcgaattccgaccacgag
tcagttaacggtgactctccatcattgacattgtccattaccaacgtggtggtgatggcc
agtatgcgatgtcacttgcgactgaaggaaattgcacgatccagcgtggatgtggaatac
aaggctttgcagaatcacgtcatcatgcggttacgctccccgtacacggttgcaaccata
tggtctagtgggaagatttggtgtactggcgcaaattcgctagcaaaggcgaagacggga
gccagacgcattgcaagacgaatcgccaaatgcggtttcccttgtcgattcagcaaatac
agagtggttaatataatggccacctgtcatttgccctttcgggtgcgcttagaggaactg
gtcaaagagaagcctatgcagatgtgctatgaacctgaattggctcctgggctgaccttc
aaaacggatcttaattccagtactttgttgaaagtcttctcgacgggacgagtcgtcatc
atgggtccgagcctcgatgctattagcgatcttgtggaagagttagtacctcttgctgct
ctgcatcaaacagacgagcccgtgtcggattctgacgacgaagagtccaagcaacataag
accgctcgtgtgagagcggaagccgcagccgctcgccgtatgctatttcttccgggagaa
cttcctatggatgcgctaggttatgttgatgacgaggatgagtacgatataaatgatgag
ggcgatggcttgggtggttactctaccgatgactcgacagacagtggtgcttctgttgat
agtgaaggtgtgagttcgcgcacgaaacggcacgatcggtctagaacactaggtcggccc
tcgaaccccatctatgacctgcaatgtaaaaaccctcctgcaccgccgcgtccaatgtcc
ttacgtgagtccatggacttcgcgttctgcaaacgcgctgctggtgatgtggacggagct
cgtggggccattgccgcggctgccgatttgcgaagggagcaagaaagccaaccacaagtt
ctttcttcgaaacctagtcacgcaaaatttgcaccacggcctgttaaggctctaccgtct
tccactgatcccacatggtcaaagaaaacagtggcttccggttccacaaaacgagcttgt
gttgtcacctactcaggtaccgaagatagtggggacacgaattttgattctgtgacaagt
gcttccatccacccaccgcctagtaccctgcaacaatctaatccggctgtccgagtgctt
ccctcgacctctatctctccaacgactactgttgttcctgctgcctgtcttccacaggca
attgtcactggctatccaccaacatcagcaccggcgcaaacgcaatatgtgattgtaaca
gcggcgcaaagtctctcacagtcgactttagttcacacatcccctgcgacacagtctaca
gctgtccaagtaattcatcacagtgttccaacagctcaacggcaggtctttcgacttgca
cagcctccagtactcggtttgtccggtcaaaatggatgcaccataccgtcgacagtttat
cctatccgggctccaccaccggcagcaggtgtacaagcagccaccgtgttacccactgtt
ggtgcaaaatttgtcaactacggtccaactccgaatagcggcgccggaccgtttctcagt
ttgaagtgcgtgtcaagcgccccgacctatcagctggttcagccatctcccataaatggc
cccgtcttcatgggaactactttttaccaacaaccgatgcagttggcgggtggcgttccc
gtaacaggtggtggcatgtttctcaatccaatgtctacggccgtggtagcgatggggact
ccggtgcacccttccttggttaacacacctatgccacaatctttcctcaccaaccaacag
agtcacctatag
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