KEGG   Opisthorchis viverrini (Southeast Asian liver fluke): T265_13519
Entry
T265_13519        CDS       T04902                                 
Name
(RefSeq) hypothetical protein
  KO
K14549  U3 small nucleolar RNA-associated protein 15
Organism
ovi  Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ovi00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    T265_13519
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ovi03009]
    T265_13519
Ribosome biogenesis [BR:ovi03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    T265_13519
SSDB
Motif
Pfam: WD40_Prp19 WDR55 WD40 WD40_CDC20-Fz WD40_WDHD1_1st UTP15_C Beta-prop_EML_2 WD40_RFWD3 Beta-prop_TEP1_2nd Beta-prop_EML EIF3I Beta-prop_Vps41 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_IFT122_1st NBCH_WD40 Utp13 WD40_MABP1-WDR62_2nd KNTC1_N Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C DUF5466
Other DBs
NCBI-GeneID: 20327686
NCBI-ProteinID: XP_009167550
UniProt: A0A074ZZK3
LinkDB
Position
Unknown
AA seq 699 aa
ALCVSPCCHRFLLFQNSPSSAQYGFQNVQRCGALSVSDKRFGRVAVISGICLLLFSSLRQ
NGRDVQLTTRVNSISVCSQGPKRFCIPCGHKVYLYKCDGDKLYRKLSGYGSRVTCCQFRS
DGKLVIVGEENGTVRICTTDKNSYHLRKMTIHKACVNAVSFFADGHHATSAGADACVRIW
DVSLGTQTAQFFMGTGKEPVKAMVASNTDPNILYSGSMEGVVALYDIRQPKAVHTLKLPN
AISAVTLDATDKTLVVADGSFIRFWNPTARKFLSAGGVSSGGVSVEQTDAVRIHYKMVTG
LCVVNHPDPQQGEVLLSVSLDKLMKVTSLVDFKELHQTRYLVPLTAVAATLDCETMIVGG
EKGFVKIRHLIRKSSMLTASAIEALESSRRAGQELEVPGGMEPALQQLAHEFSGHWRGGD
KYIQMTTDTWLSQPFDGPRRGPRDWLTEGESAGTAARKVPLIYETSEISRDGFRFYADDS
ERQPFTRVDRLLTRFSHSQALSVVTRFPWSASRRRPSVYARKHKQRLLAVGVIRELARRG
TLVAAVAGRDVKQLARLLRFIRHNVWRRESATVCLKLYNCILDEYSADELAQVTEFSKVN
VVLQHLSRNTQSICEIVNFLRDSIKKETAASHTPADNKPVPKKKLRNSSTKRPLTKRDSS
AIADSPGVTAGVSSHVAASVPKRMRSPGLLRPFKRTRPS
NT seq 2100 nt   +upstreamnt  +downstreamnt
gcactctgcgtatctccatgttgccatcgttttttattgtttcagaactcaccctcctct
gctcaatatggtttccaaaacgtacagcgttgtggcgccctatcagtgtcagataaaagg
ttcggacgtgtggcagttatttcaggtatctgtctacttcttttttcatcccttcgtcag
aatggtcgtgatgtccaactgactactcgtgtcaactcaatttcagtgtgttcccaagga
cccaaaagattctgcataccatgcggacataaggtttacctgtataaatgcgatggggac
aaactgtatcgaaagctttctggctatggttctcgggtgacctgttgtcagtttcgaagc
gacggtaagctggtgattgttggtgaggagaatggtaccgtacgcatctgcacgacagac
aaaaacagctatcacctgcgcaaaatgacgatacacaaagcgtgtgtaaatgcggtctcg
tttttcgctgacggacatcacgctaccagtgcaggcgcggatgcttgcgtccgcatatgg
gatgtctcgctggggacacagacagctcagttcttcatgggcactggtaaagaaccggtg
aaagctatggtagcatcgaacactgaccctaatattctctattctggaagcatggaaggt
gtggtagccttgtacgacatccgccaaccgaaagcagtgcacacgctgaagcttccgaac
gccatttccgctgtcaccttggacgcgactgacaaaactttggtagtggctgacggctcc
ttcatcagattttggaaccctactgccagaaaatttctctctgccggcggtgtgtcatca
ggcggtgtatctgtcgagcaaacagacgctgttcggattcattacaaaatggttactggc
ctttgtgtcgtcaaccatccagatccacaacaaggtgaagtgcttctgtcagtttccttg
gacaaactgatgaaggttactagtttggtcgatttcaaggagctacatcagaccagatac
ctcgttccactcactgcagtcgctgccacgctcgactgtgaaacaatgattgtcggtggt
gagaaaggttttgtcaaaattcggcatctgatccggaaatccagtatgctaaccgcttct
gcgattgaagctctggaaagcagtcgacgagcaggtcaggaattggaagtgccgggtggc
atggaacccgcgttacaacagctcgcccatgaattttccggccactggagagggggtgac
aaatacattcaaatgaccacggacacctggctcagccagccgtttgatgggccacgtcgt
ggaccaagagactggctcactgagggagaaagtgctgggacggccgcgcgcaaagttcca
ctaatttacgagacgtcggaaatttcacgtgacggattccgtttctacgcggatgacagt
gaaagacaaccgttcacgagagtggatcgtcttttgactcgtttcagtcactcacaggct
ttatccgttgtgacgcggtttccgtggtctgccagccgtcgtcgcccgtctgtctacgca
agaaagcacaaacagaggcttttggcagtcggtgtcatccgtgaactcgccagacgaggc
accctcgtggctgctgtggcaggtcgagacgtaaaacagctagcgcggttattacgcttt
attcgtcataatgtctggcgtcgggagagtgcaactgtgtgtttaaagctgtacaactgt
atcttggacgagtactccgcggacgaacttgcccaagtgacagagttcagcaaagtaaat
gtggttctgcaacatctgtcgcgaaacacccaatcaatctgtgagattgtcaacttctta
cgtgattccattaaaaaagaaactgccgcgagtcacacgccagctgacaataagccagtt
cctaagaagaaactgcggaattcatctacgaagcggcccctcaccaaacgtgattcaagt
gccatcgcagacagtcctggagtaaccgccggcgtgtcatctcacgtagcggcttccgtt
cccaaacggatgaggtccccaggtctcctcagacctttcaaacggactcgaccatcttga

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