Opisthorchis viverrini (Southeast Asian liver fluke): T265_13543
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Entry
T265_13543 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K26109
nuclear exosome regulator NRDE2
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovi03019
]
T265_13543
Messenger RNA biogenesis [BR:
ovi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
T265_13543
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NRDE-2
Motif
Other DBs
NCBI-GeneID:
20327710
NCBI-ProteinID:
XP_009167644
UniProt:
A0A075AGE2
LinkDB
All DBs
Position
Unknown
AA seq
1552 aa
AA seq
DB search
MFPAGIIASDTTEKPADADTDKAWLHSSTYSERSEKFPVPVKAPLKPTAPSKKLVLTGEK
RPDPHRASSEPPKKKPAPTNKAIFLEDVPGLSLSDAYHLDRSSNRQIYTFGSIYEKHVAQ
FRRKPNTPILGFRSLRVCDLCDAQQKETSTKRVKKSRYFSKASRAVFSKPAQNFPSSEVV
SDTQLILRFLPDYISVSNPVNESTNVALTRCESLNRKVYDAPNDVRAWLELMDMQAKEAV
FLHVTESATSSVRVTYIPASLTMGDRLLILQKQLSIAERALTSNPGSLSLKILTLRIGEM
AGELQSQGASGAMCQSKDSLFQPERVGRDWAQLVFTYPQLVPVWRGYITHLMGKYSTPPT
ATPTIGSGLFARIDSVFKKALSTLAGIICGRILSHRPQPDTAEQAIDFLADYCRWLVQAG
HAERALATWQAVIEFNLFRPSDLTGMPTDQCLLEMELFWSSGAARFGQPGSQHWSGWYRA
NRRGHSAEQRQQVSRKSKKPPSGLYPVEELQPDATVEQSQSKWVEVAEKLKSIASTCEDA
LIQCSAELLTDDAQQKLDIEIVPSVLSSAVSADQWTRRGAVPSLAGNASLGKSRAVQYRR
GKAWVGLERAREAVGWLPADTLNNTDVEEEDPDRLVLFDDVKPCLLELYNLDEKAAPPSG
DKQSRLVALQQRLILQCLEFLGAYEPDVAKAFQLPADLRVVHDLTHIGPIQRQGLSPLFG
QNAGSVVQDSTGVKDKFAHLAGSHQEIWAQARRCFLDSALIQVSHLTRWKKEVQTQWATV
IGRLRLQLALDRLLDGIQTHNLSTKASFQGIGFTDGSIFKELLCIISNCADLETVIATWR
HCGRSVMAEAQNQNDLELWQSYAMGFWKAALLFTRLDVAQEELETMVSQSRRIFDTALTT
YPIPDDASSPPADVVNDALIQFYDQSLAPRFKLIQHYIDLELGVFPGIGAVKRPLGCESR
ALQLLVQAANGGTYTAPEPHATLRPSILVRTSHAYGKRMEMIWRTLVSLPEDSRLDPVVH
GPLLSGLTSFAPVVAYLSLMFDLLTTDEEHYIDLELDVFPGIGAVKRPLGCESRALQLLV
QAANGGTYTAPEPHATLRPSILVRTSHAYGKRMEMIWRTLVSLPEDSRLDPVVHGPLLSG
LTSFAPVVAYLSLMFDLLTTDEESLSNSLPSLISVLQRIDRLRSALSVSARDRESRWSDS
ESAPSVRYRVCMRRLLSLIIGGLAAFGSLRQRNHRSLMDRLFKIWELSETTRSATELPCD
LLFPSQLTYLLPPRAALEKSLLPVSLVNAASCQGLLPPLFLSQLIRQLGQFSKAVAELAA
QNAVDNAVSGTRISGAHSMLDPRYSSNLLGADISMLSGSQLDSYAGCLPVALDLFILSLE
LERWLSLIAGVSATSVNGRNIAVDSTSSQRVRNAFERAVRAGPFVTPLLSEHGQLHHIAL
AATTPSFWAAHLRLVVWRAYMAFGWMSETSQDRQFPAPSVTDPRKRRQAIKSVFYRAVED
LPWAKVLYTDLVRYCPEDVEEIVDLLSERELRLRTPLEEIDLLLTARPQATE
NT seq
4659 nt
NT seq
+upstream
nt +downstream
nt
atgtttccggcagggattattgcgtcggataccacagagaaacctgctgatgcggacaca
gataaggcctggttgcacagttcaacgtactcggaaagatcggaaaaatttccggttccc
gtgaaagctcctttgaaaccgaccgcaccgagcaaaaaactcgtccttacaggtgaaaag
cggcccgatccccatagggctagttctgaacccccgaagaagaaaccggcaccgactaac
aaagccatcttccttgaggatgtacctggtttgagtttgtctgacgcttaccatctagac
cggtcctcgaatcggcaaatctacacatttggttcaatatacgaaaaacatgttgcgcaa
tttcgtcgtaaaccaaacacaccgatccttggattccggagtcttcgcgtctgtgatttg
tgcgatgcacaacagaaagaaacttccactaaacgtgtcaagaagtcgcggtatttcagt
aaggcaagccgtgcggttttttcaaagccagcgcaaaacttccccagcagtgaagttgtt
tcggatacccagctcatcttgcgctttttgccggattatatttctgtctccaatcccgtg
aatgaatctaccaacgttgctctgactcgttgtgagtcactgaatagaaaggtgtatgat
gccccaaacgatgtccgtgcctggttagaactgatggacatgcaagccaaagaagctgta
tttctccacgtaaccgaatctgccacatcctccgtgagggtgacctacatacctgcctca
ttgaccatgggcgatcgattgctgatattgcagaaacaactgtcgattgctgagcgggcg
ttaacctcaaaccctggctctctgtctttaaagattctcactctccgaatcggtgaaatg
gctggggagttacaatcgcagggcgcttccggagctatgtgtcagtcgaaagatagtttg
tttcagccagaacgtgttgggcgtgactgggcccagttggttttcacttacccgcagcta
gttcccgtatggcgaggctatattacacacttaatggggaagtattccactccacccact
gcgactccaacaattggtagtggtctctttgctcgaatcgatagcgttttcaagaaggca
ttgtcaacactggcggggatcatttgcggtcggatactgtctcatagacctcaaccggac
actgcagaacaagctatagattttttggctgactactgtcgctggcttgttcaggcggga
cacgcagaacgtgctttggccacgtggcaagctgtcattgaattcaatttgtttcgccct
tcggacttaacgggtatgcccactgatcagtgcttgcttgaaatggagttgttttggtcc
agtggagccgctcgttttggccagccggggtcgcagcattggtctggctggtatcgggca
aatcgtcgtggccattctgcagagcaacgacagcaggttagcaggaaatcgaaaaagcca
ccttccggtttatatcctgtggaggaattacagccggatgctaccgttgagcagtcacag
tcgaagtgggtagaggtggcagaaaagctgaaatcgatcgccagcacgtgcgaagatgcc
ctcattcaatgctcggccgaactactgactgacgacgcccaacagaaactcgacatagag
attgtaccatctgtactctcatctgcggtatctgcagatcagtggacacgtcgaggagct
gtaccctcactcgctggcaatgcttcactgggaaagagccgtgctgtacagtatagacgt
ggaaaagcttgggtaggcttagaacgagcacgtgaagcagtggggtggttgcctgcagac
acattgaacaacaccgatgtggaagaggaagacccagatcgtctcgttcttttcgatgat
gtcaagccttgcttgttagaactgtataatttggacgaaaaagccgcaccgcccagtggg
gataaacaaagtcgtctggttgcacttcaacagcggctgattctccaatgcttggaattt
ctgggcgcttacgagccggatgtagcgaaagcgttccaacttcccgcagacctccgtgtt
gtccatgacctaacccatatcggtcccatccaacgtcagggtttgtctcctctgtttggt
caaaatgctggttcggttgtacaggattcgactggcgtaaaagacaaatttgcccatctg
gcaggtagtcatcaagaaatctgggcacaggccagacgttgctttctcgattctgctctt
atccaagtcagccatttgactcgatggaagaaggaggttcaaacgcaatgggcaaccgtc
atcggtcgcttacgactccagttagctctggatcgcctactggacggtatccagacccat
aatttgtccactaaggcaagttttcaaggtattggctttactgacggtagcatattcaag
gaactcttatgtataatttcgaattgtgctgatctggagactgtcattgctacgtggcgg
cactgtggtagatccgtcatggccgaggcccaaaatcaaaatgacctagaactttggcag
tcatacgccatgggattctggaaagccgctcttttattcaccagacttgatgttgctcaa
gaagagctagagactatggtgtctcaatccagacgcatttttgatacagcactcaccacc
tatcctattccggatgacgcttcatcccctcctgctgacgtggtcaacgacgcattaata
caattttacgatcagtcacttgcaccacgtttcaaattgattcagcactacattgatttg
gaacttggtgtcttccctggaatcggagcagtcaaacgacccttgggctgtgaatcgcgc
gcactccaacttttagtgcaagcagccaatggtggtacttacacagcacccgaaccccac
gctacactccggccatccatcctggttcgaaccagtcatgcctacgggaaacggatggag
atgatttggcggacacttgtctctctgccagaagattcgcgcttggatcccgttgttcat
ggacctctgttaagtggactgacatcgttcgccccggttgtggcctatctcagcctaatg
tttgacctgttgacgacggacgaggaacactacattgatttggaacttgatgtcttccct
ggaatcggagcagtcaaacgacccttgggctgtgaatcgcgcgcactccaacttttagtg
caagcagccaatggtggtacttacacagcacccgaaccccacgctacactccggccatcc
atcctggttcgaaccagtcatgcctacgggaaacggatggagatgatttggcggacactt
gtctctctgccagaagattcgcgcttggatcccgttgttcatggacctctgttaagtgga
ctgacatcgttcgccccggttgtggcctatctcagcctaatgtttgacctgttgacgacg
gacgaggaaagcctatcgaactcccttccgagtctgatcagcgtactacaacgtatcgac
cgcctgcgttctgctctgtctgtcagtgcacgagatcgggagtccaggtggtctgatagc
gagtctgcgccctctgtgcgttatcgcgtgtgcatgcgtcgccttttgtcactcattatt
ggtggcctggcagcgttcggttcacttcgtcagcgcaaccatcgctcattgatggataga
ctattcaagatttgggagttgagtgagactacgcggtctgcgacagaactgccctgtgac
ttactgttccctagtcaacttacatatttactgcccccacgagccgccttggaaaagagt
ctacttcccgtgtcactcgtgaacgccgcttcctgccaaggcttgctcccgccgttattc
ctctcgcaattaattcgacaactgggacagttcagcaaagctgtcgctgaactagccgca
caaaatgcagtggataacgcagttagtggtacgcgaattagtggggcacattcgatgctt
gatccacgatactcctcaaatctattaggagctgatatctcgatgctgtctggctcacag
ctggattcatatgctggttgtttaccggtcgcgttggacctatttatcctgagcctcgaa
cttgagcggtggcttagcctcatcgccggtgtctccgcgacttcagtaaatggtcgcaat
atagctgtggattctacgagcagccagcgcgttcgtaacgccttcgaacgtgctgttcgt
gctggaccgtttgtaaccccgttgctttccgaacacggtcaactgcaccacatcgcactt
gctgctactacaccgtccttttgggccgcacatttacgcctcgtggtgtggcgtgcttac
atggcgtttggttggatgtccgagacatctcaggacagacaatttcctgcccccagtgta
acagaccccaggaaacgccgtcaagcaatcaagtcagtgttctatcgtgcggtagaggac
ttgccgtgggccaaggttctttacactgatttggtgcgttattgcccggaggatgtggag
gaaattgtggatcttctgtccgaacgagagttgcgtttgcggacgcctttggaagagatt
gacctgctcctgaccgctcgacctcaagcgactgaatag
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integrated database retrieval system
