Opisthorchis viverrini (Southeast Asian liver fluke): T265_13997
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Entry
T265_13997 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
T265_13997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ovi03400
]
T265_13997
Enzymes [BR:
ovi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
T265_13997
DNA repair and recombination proteins [BR:
ovi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
T265_13997
Prokaryotic type
T265_13997
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
DUF5999
Motif
Other DBs
NCBI-GeneID:
20328164
NCBI-ProteinID:
XP_009169846
UniProt:
A0A074ZGJ2
LinkDB
All DBs
Position
Unknown
AA seq
396 aa
AA seq
DB search
MPKLPYVNQKPLTAFFTSPKAVAKLPDAKENSITPASPAETPKSARTPEKRALEEICPSN
TNGQPNVDDDVESTKRPRVESDTAQQIKSPPPSAWGSFPLGKSSTSALGREDLNKKLAEI
KRKLASRPTRSVLTLIQGLHPEWACVLQQQIESERFQKLADFVAGERARPTAVYPPCEQV
FTWSQLCPPSSVRVVILGQDPYHGPKQAHGLAFSVQRPLPPPPSLINMYKEIRSGLPESA
GNLEWSPKHGDLSGWARQGVLLLNAVLTVRASSPNSHKDQGWELLTDAVIRHLSKDKSVS
TGDKTQGDYGNIRQRMNSLRDMDKEPTCPLRIQPSRTKILMKTSPKVVTVSAESAVCLSK
ATVRPTPFDLPSFCVGTIPWRTSFQSVEASGFATGL
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagttaccatacgtgaaccagaaacctttgacggcatttttcaccagtccgaaa
gctgtggcgaagttgccagatgccaaagagaattcgatcactccagctagtccggcagag
acaccaaagtctgcccggacccctgaaaagcgtgccctggaggagatttgtccttctaac
acaaatggacaacccaatgtggacgacgacgtggaaagtacaaaacgtccacgtgtggaa
agcgacacagctcaacagataaagtcgccaccaccgtcagcgtgggggagttttcccctc
ggcaagtccagtacatctgcgcttggacgcgaggacttgaacaaaaagctagccgaaatc
aaacgcaaattagcctcacgaccaacacgttctgtgctcactctgatccaaggactgcac
cctgaatgggcgtgtgtactacagcagcaaattgaaagcgaacgtttccaaaaactggcc
gactttgtggctggagaacgagcacgaccgactgcagtctatcctccctgtgaacaggtg
ttcacttggagccaattgtgccctccttcgtcggtccgagtggtcatcttgggtcaagat
ccctatcatggtccgaaacaagcgcatggacttgctttctccgttcaacgtccccttcct
cctccaccaagcctgatcaatatgtacaaggaaattcgttcaggattgccggaatcagcg
ggaaatctggaatggtcaccaaaacacggtgacctcagtggttgggctcgccagggtgtg
cttctactcaacgcagtcctcacagtccgggcttcttcaccgaattcgcacaaagatcaa
ggatgggagctcctgacagacgccgtgattcgtcatctgagcaaagataagtctgtgtcc
accggggataaaacgcaaggagattatggcaatattcgtcaacgaatgaactctttgagg
gatatggataaagaacccacatgccccctacgaatccaacccagtcgaaccaaaatccta
atgaagacatcccctaaagttgtgacggtctctgccgagtcggctgtctgtctttccaag
gctacggtacgtccaacgccattcgatttaccctcgttctgtgtaggaactattccttgg
agaacttctttccagagcgttgaagcctccgggtttgcaactggactatga
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