Opisthorchis viverrini (Southeast Asian liver fluke): T265_14346
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Entry
T265_14346 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K12821
pre-mRNA-processing factor 40
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
T265_14346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ovi03041
]
T265_14346
Spliceosome [BR:
ovi03041
]
Complex A
U1 snRNP components
U1 related factors
T265_14346
Complex B
T265_14346
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
WW_2
Clat_adaptor_s
Motif
Other DBs
NCBI-GeneID:
20328512
NCBI-ProteinID:
XP_009171513
UniProt:
A0A074ZN51
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MAGYPPYTTSFHHPYAQVAYLPAAVPTIAPVSQWIEHTSHDGRKYYYNTATQQTTWEKPQ
ELKTTRELILSSCPWKEFKSENGRLYYFNEQTKQSVWVKPQELIDAENQAESASSTAASD
KKVPTSSVLGTPCTPATPKDEPSKPPEPSAIEKAMMATLSSYDLPTTTDSIPIPPPPPTE
APAETQNEYVDRTNADNAGRVGTTSSGGSPAPHQEYKTRGEMAEGLRRLFRDCNVPGSAT
WEQALKLISADPRYSLLKTFTEKKQIFNVYKTQRLKEEREEQRLRAKQAKEDLERFLLRH
PKLHSTMSYRKVEQLLSDAREWTSVPDRDRRELFEDVMQLISKRERDEAKVVRKRNIKVF
HEILSGMPNLTFRTTWSEAQQMLLDNPKFTGDIELQSLDKEDALICFEEHICMLEQEHDE
EKERDRRRQKRQQRKNREAFIVLLDELHENKLLTATSLWKDLYSIINRDERFHKMLAQRG
STPLDLFKFYVEALKARYPAERKLIKEIIKDNGLNIDLSTSFEDFVALVSKDERSKGIDD
GNMRMTYESFLEKAQGRERERQRDDARRMRKLEQNFCEMLCSAKFIGHNTTWEEVRDHFS
GHPAFCALTLESERIRLFKEYLISLESAALAESEKSRKGHKEKHRHKREVSESVDKREKS
KKRLTPASPDHSDASGAHISDGDVAGGSGKRKHRKSKKSKHRKSKHRKHHKAESRQAGGE
ELEEGEAADDDDEGEATEEDTRHRRRKHRRRARSSDPEDGEEVDSGSEDEETYERESKRK
RH
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggctggatatcctccttatacaaccagtttccatcatccgtatgctcaagtagcatac
ctgcctgctgctgtacctaccatcgctccggtcagtcagtggatagaacacacatcgcac
gatgggcgtaagtactactataacactgcaacgcagcagactacctgggaaaagccgcaa
gaacttaaaactaccagggaacttatactttcaagttgtccttggaaagaattcaagtca
gaaaacgggaggttatactactttaacgaacaaacaaaacagtctgtttgggtgaagcca
caagaattaattgatgctgagaatcaggcagaaagtgcctcatcgacagccgcgtcagac
aaaaaggtccccacttcttcagtattaggaactccatgtacaccggccacgcctaaggac
gagccctctaagccgccggaaccttcagctatcgaaaaagcaatgatggccacgttgagt
tcttacgacttgccgacaacaacggacagtattccaatacccccaccacctccaacggaa
gccccagcggaaacgcaaaatgagtatgtggatcgtaccaacgcagataatgccgggcgg
gtgggcactacaagctcaggcggttctcctgcaccgcatcaagagtacaaaactcgtggg
gagatggcagagggactacgtcgcttattccgtgactgcaacgtacctggctctgcgact
tgggagcaggccctcaagcttatttccgccgacccacgatattctcttttgaagaccttc
acagaaaagaaacaaattttcaatgtctacaagacacaacgcttgaaggaggagcgtgaa
gaacaacgcctacgcgctaaacaggcgaaagaggacttagaacgcttccttctccgacat
ccaaaactccattccaccatgtcttacagaaaagtagaacagttgctctcagatgctcgt
gagtggacgtccgtgcctgatcgagatagacgggagcttttcgaggacgtgatgcagttg
atttccaaacgtgaacgcgatgaggcgaaagtggtcagaaagagaaatatcaaagttttc
catgaaatactcagtggaatgccaaatcttacattccggacgacctggagtgaagcacag
caaatgcttctggacaatccgaaattcacaggagatattgaactgcaaagtctggacaag
gaggatgctctgatttgctttgaagaacatatttgcatgttggaacaggagcatgatgag
gagaaggagcgcgatcggcgtagacagaagcgtcaacaacgaaagaatcgcgaggctttc
atagtactgttggatgaactacacgaaaacaaattgctcacggcaacgtccctatggaaa
gatttgtactccatcattaacagagatgagcgattccacaagatgctcgcgcagcgtggg
tcaactccactcgatctcttcaagttctatgtggaggcgcttaaagcccgttatccagcc
gaacgaaagcttataaaagaaattatcaaggacaacgggctcaatatcgatctgtctacc
tcctttgaagattttgttgctcttgtctcgaaagatgaacgaagcaagggcattgatgat
ggtaacatgcgcatgacctacgagagtttcctcgaaaaggctcaagggcgggagcgcgaa
cgccagagagacgatgcacgtcgaatgcgtaagttggaacagaatttctgtgagatgctt
tgttcggccaaattcatcggacacaataccacatgggaagaagttcgagaccatttcagc
ggacatccagctttctgcgcgttgactctggaatcggagcgcattcgtttgttcaaagaa
tatctgatctccctagagtctgcggctttagcggagagcgaaaagtcacgaaaaggtcac
aaggagaagcatcgtcacaagagagaggtttcggagagcgttgataagcgtgaaaaaagt
aagaagcgattgactccggcatcccctgatcattcggacgctagcggggcgcacatctca
gatggtgacgtggcgggcggttctgggaagcgtaaacatcgaaagtccaagaaatccaag
catcgaaaatcgaagcaccgtaaacatcacaaagccgaaagtcgacaagcagggggtgaa
gagcttgaggagggagaagctgccgacgatgacgatgaaggggaagctaccgaagaggac
acccgtcatcgtcgtcggaagcaccgccgacgtgcacgttcgtctgatccagaggatggg
gaggaggtcgatagtggaagtgaggatgaagaaacctacgaacgtgaatcgaagcgcaaa
cgacattag
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