Opisthorchis viverrini (Southeast Asian liver fluke): T265_14667
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Entry
T265_14667 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ovi03041
]
T265_14667
03016 Transfer RNA biogenesis [BR:
ovi03016
]
T265_14667
Enzymes [BR:
ovi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
T265_14667
Spliceosome [BR:
ovi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
T265_14667
Transfer RNA biogenesis [BR:
ovi03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
T265_14667
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
Motif
Other DBs
NCBI-GeneID:
20328833
NCBI-ProteinID:
XP_009172940
UniProt:
A0A074Z897
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MATAFETEMGVMPELSKAVQEMDWILPTDIQGEAVPLILGGGDVLMAAETGSGKTGAFCL
PVIQIVYETLKNLQSGKHTGGHAGGVKQPFKLNPNDRTEAMAIDADGLLCQSRDPGGWHG
ARANRGVKNSGKYYYEAVVTDDGLCRVGWSTLRASHDVGTDAESFGFGGTGKMSHRRQFD
SYGESFGKGDCVGCFLDLNNGTISWSKNGKLFGKAYDVPAPLRSAGLFPSVCLKNAEIRF
NFGATAFTHPPPAGWLAVSAAEGSNVIESTFSSSSVANRFVPKPNAPLALIMEPSRELAE
QTCEQIRKFKRYLKDPCPRELLIIGGGDTKRQLDALHSGVDIVVATPGRLDDLLSTGTLS
LSNCRFFILDECDGLLSAGYGDMITRLHSQIPKVTPDGGRLQMVVCSATLHSFEVKKLAN
KLMHFPVWIDLKGQDSVPETVHHVVCHVDPYKDESWKEKMGQPQGHIQTDGVHLKDRCHP
GDPSAETLSEAVKLLKGDYVVRAIKQQKMDRALIFCRTKLDCDNLEQYFVSLGGGPNRRD
SQFSCVCLHSDRNPAERKANLQKFKNGDVRFLICTDVAARGIDIAGLPYVINVTLPDEKE
NYVHRIGRVGRAER
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggccacagctttcgaaaccgaaatgggtgtcatgcccgaactgtccaaagccgtacaa
gaaatggactggatcctaccaacagatattcaaggtgaagcagttccacttatcctgggt
ggtggtgacgttttgatggctgccgaaacaggaagtggaaagaccggcgccttttgtctt
ccagttattcagattgtctacgaaaccctgaagaatttgcaatctggaaaacacaccggt
ggccatgcaggaggtgtaaagcaaccattcaagctgaatccgaacgacagaactgaggca
atggccatagacgcagatggtcttctctgccaaagccgtgatcctggtggatggcatgga
gcgcgggcaaatcgtggtgtgaagaactccggcaagtattattacgaagccgtcgtgacg
gatgatggtttatgtcgcgtcggttggtcaactcttagagcatcgcatgatgtgggaaca
gatgctgagagcttcggtttcggtgggacaggaaaaatgtctcatcgtcgtcaattcgac
tcatacggagaatcatttgggaaaggtgattgcgtcggttgttttttggatctgaacaat
ggaaccatcagttggtcaaaaaatggaaaactgtttggcaaagcgtacgatgtccctgct
cccttgcgctcagctggtttatttccatcagtgtgcttgaaaaacgccgagattcgtttt
aactttggtgcgactgccttcacgcaccccccaccagcaggctggttagctgtgagtgct
gctgagggatcgaatgttattgaatcaactttctcaagctccagcgtcgcaaatcgcttt
gtgccaaagcctaatgcaccacttgctttgataatggagccgtctcgtgagctggcggaa
caaacatgcgagcaaattcgaaagttcaaacgttacttgaaggatccttgtccacgagag
cttctgatcatcggaggtggagatacgaagcggcaactggacgcattacacagtggggtt
gatattgtcgtcgcaacccccggccgtttggatgatctgctatccactggaactctatcc
ctctccaattgccgatttttcatcttggacgagtgtgacggattgctgtccgcaggttat
ggagatatgatcactcgccttcatagtcagatacccaaagtcactcctgatggagggcga
ttgcaaatggtcgtttgttcggctactctgcattcgtttgaagtgaagaagttggctaat
aaactgatgcatttccctgtgtggatcgatctgaagggacaagacagcgtacctgaaact
gttcatcatgtggtttgtcacgtggatccctacaaggatgagtcatggaaagagaagatg
ggccaaccacaaggccatattcaaactgacggtgtacacctgaaagatcggtgtcatcct
ggcgatccgtcagctgagaccctatctgaggcggtgaagttactgaagggcgactacgtc
gtacgggcgataaagcagcaaaagatggatcgagctttgatcttttgtcgtacgaagctg
gactgcgacaacttggaacagtactttgtctcactgggtggaggtcctaaccgccgggac
tcgcagttcagctgtgtctgtttgcatagtgatcgaaacccagctgaacggaaggctaat
ctgcaaaagttcaagaatggtgatgttcgatttctgatctgtaccgatgtggctgctcgt
gggatcgatattgccggtctaccttacgtgatcaatgtcaccttgccggatgaaaaagaa
aattatgtccatcgaattggtcgcgttggccgtgccgaacggtaa
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