KEGG   Opisthorchis viverrini (Southeast Asian liver fluke): T265_14908
Entry
T265_14908        CDS       T04902                                 
Name
(RefSeq) hypothetical protein
  KO
K20826  RNA polymerase II-associated protein 1
Organism
ovi  Opisthorchis viverrini (Southeast Asian liver fluke)
Brite
KEGG Orthology (KO) [BR:ovi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ovi03021]
    T265_14908
Transcription machinery [BR:ovi03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     T265_14908
SSDB
Motif
Pfam: RPAP1_C RPAP1_N
Other DBs
NCBI-GeneID: 20329074
NCBI-ProteinID: XP_009174018
UniProt: A0A074Z9J7
LinkDB
Position
Unknown
AA seq 1739 aa
LPLPHFFFCLTSPGLLLPFARLCEKGCSRKSVDWHKEHVIKPAKLWSVISSSFVDKLFPK
TIECISAMLILEYMTEGSEERYEKPSLDSLPTQATSLPSADPLSSFDIRERDLHEDDFEM
TFEDCPQTTSFPVAFRRSAVSVGESLTSNSSTKSIFAREMELRAVKRRPQQLHDPVSSDG
CALLNKGDGLEYLRAHGPQTVSGTGLGSRFREVERIHQENLTRLSHMSEDEIAKERELLL
SSMNPSMVAFLLHKNRRNIATNARPSRKEQVKSRFSLSRRPANDATSPLSDDPMVKGVAQ
LEEEKLEWTRDLPVTARRPPELHVVAGSQPCSSEDIEMNETHPENKTSKPCQARFDLCGL
VVPPDAVLDTHLGLHHHGEEPERAGYTIGELFHLSRSSVPAQRRLALATLATALGQTRRG
RHVHNLAPVSSPSLIWGLLSSSSDSVEGDGPGSGGGKGGVAFLLRWCLDESVSSLTSVGA
VSAGTDISISGHSGGASLGLTVECIRGLANLLCDADGESYLNSTHEWPLQMATKQHLFLA
PPTLQRKVPSRIPGVLQLTKAPAEEEPDHSEAMSLDPVFFLFTQGQLGQRLAWLLADEKG
NLRTKLPPDAVGLWLPALLVRAVRHSPALAYRVFSIPNLFRTLLDHYLPVCYGNDSTSAS
AVRPTRLSQATGIPFAAVMLLCRLTMLTSTSIRLAMVNDLRLIERCCSYLIPSEAEDCNH
LSEQWSPLSRLPPALPLKLAVQVHIEALRCLSACLVPLSDAESIPLHALNCIWNTLPILC
ATLNRMADNYFEHFGAPTQPHTEDVLILPQLLVSWISFLTQAFESFVLGSSPKVSQQKTK
FIGLRLRNGSLRGGPQFPENPSEQKPAPRTPYNNRFPSGLSKYSTASNYTSSLLLCRKIT
NWSVQSFHECVDELFRHLLQLLSHILSKFTCGFAALEEIHMHLLNHGITANLVAVVVDCS
VRLLDAQQQVDRLPQTPPFFQRIDTLWTTYLLPLFYHDVWSRTVRRFVRSRSVLTGVPEV
MGDVDVVTVPRLPPDENDPNRPVIDWTNLSSSTSIDEGLLEPVDLVPRCLPDLGTRISFA
IEGLLEPVDLVPRCLPDLGTRICFRYRTADPGLAAFVWPKSGIRMEDDCNPLSPAPGDFC
SLALLTCTVSVLERILLNWRFHLASDSGVSPHVFAPLIGWIRRLVRKRPLPWLPGHSGRT
MTSLPYALIAMESCTLGKAVLVLSQILTHQCTLSSRLAREPFADEDRCLLHRAALRLLPL
LRGGQKQLLCALQDEVVFSPHQIRSLSSDAVSGLGDQFLHNVLQVYRKYACGTNLEGSVE
DAAKEDRSSHLPALPEESDMDQDQSVARVSQPSADVSRIQAPINCSVSVASSLLPHDWSY
APLIGQYLQAKRLANAGITASSNETEQQESLFDLTVGLRWLLFLYEIHSCQDSPGNCGIL
DPLAHLTRLSLGCLGYAGAGGLGFGQSGVLLAKLIHLVGSMRRLQQSSNRPYSLETVDLP
PFCASFYDVYTDLLGHFAALSYNSPVFANLILWPCQQLCHMKYRRALWGEHQSALVAVRL
RLDQLLLPVDSFLDPEETDESVLRVYASALLSGGVRVDRQPLLFLIAVHHINRYLYHAQN
AKSAFVQQFSRLVRAAPHHQDSNRQKPATSLRANVLDIIRHYKQPNSVWTGQNPQILPDD
CLAVGVTDPLVVCQGAHRTFESDSVATFTTLVANAGIECYSPNQLPAHRKTFWDQYIST
NT seq 5220 nt   +upstreamnt  +downstreamnt
ttacccctgccccattttttcttttgtttgacttcccctggtttacttctacccttcgcg
agactgtgcgaaaagggctgttcgagaaagtccgtcgactggcataaggagcacgtgatc
aaaccagccaaactatggagtgtaatcagttcatctttcgtagataaattatttccgaaa
accatcgaatgcatctcagcaatgctgatcctagaatatatgacagaggggagtgaagag
cgttacgaaaagccctcgttagacagtttacccacacaagcaactagcttgcctagtgcg
gacccattgtcttctttcgatattagagagcgagacttacatgaagatgattttgagatg
actttcgaagactgcccgcagaccactagctttccggtggctttccgtcgttccgctgtg
agtgttggtgagtcactcacttcaaactcgagcaccaaaagcatattcgctcgagaaatg
gaattgcgtgccgtcaagcggcggccacagcagctgcacgatccggtctcttctgacggt
tgtgctctcctcaataaaggggacggacttgaataccttcgggcacacgggcctcaaacc
gtttctggcacggggcttggctctcgctttcgagaggtagaacgcattcatcaagaaaat
ctaacacgtctgtctcatatgtcggaggacgagattgcaaaagaacgtgaactgctgctc
tcctcaatgaatccatcaatggttgccttcttgttacacaagaatcgccggaacatcgca
actaatgcacgaccatcgcgaaaggagcaggtgaaatcaaggttctcgctttcgcgacgt
ccagcgaatgatgcgaccagtccattgtctgacgatccgatggttaagggggtagcgcag
ctagaagaggagaaacttgagtggacacgtgacctgccggtcacagctcgcagaccaccg
gaactgcatgtggtcgctggatctcagccatgttcatcggaagacatcgagatgaatgag
acccatccggagaacaagacgagtaaaccatgtcaggcccgatttgatctatgtggcttg
gttgttccaccggacgccgtacttgatacccacttgggtctgcatcaccatggggaggaa
ccagagcgtgcaggctacaccatcggtgagctgtttcatcttagccgctcaagtgtgcct
gctcaacgccgcctggctctggcaacgctggcaacggctctgggtcagacacgccgtgga
cgacatgttcacaacctcgcacctgtatcttcccccagtctaatctggggcctactttct
tcatcgagtgattcagttgaaggagatggacctggtagcggtggggggaagggtggagta
gcttttctgctacggtggtgtttagacgaatcggtgagttcgctcaccagtgttggggca
gtttcagccggcaccgatatctcgattagtgggcattcgggtggtgcatcacttggtctg
acggtggaatgcatccgtggtctggcgaacttgttgtgtgatgccgatggagagagctat
ttgaacagtacccatgagtggcccttgcaaatggccaccaaacagcatctatttttggca
ccaccaacgcttcagcgaaaagttccgtcaagaattcccggtgttctccagttgactaaa
gcaccggcggaagaggaacccgaccacagtgaggctatgtctctggacccggtgtttttt
ctcttcactcaaggtcagttgggtcagcgtttggcctggctcttggctgacgaaaaggga
aatttgaggacaaagctgccaccggacgctgtcggtctgtggcttccagctttgttagtt
cgcgcagttcgacactcacccgctctggcctaccgagttttttccatacccaatctgttt
cggacacttttggaccactacttgcccgtgtgttatggcaatgactcaacttctgcatca
gctgttcgaccgacacgtctgtctcaggctaccggtattccttttgcagctgtgatgctg
ttgtgtcgcttgacaatgcttacaagtacaagtattcgattggcgatggtaaacgacctc
cgcctgatcgaacgatgctgttcttatctcatcccctctgaagccgaggactgcaaccat
ctctcggagcaatggtccccgctctcccggttgccacccgcccttccgctcaaactggcc
gtgcaggtgcacattgaagctcttcgatgtctctccgcctgtctagttcccctgtctgat
gcagagtctattccgcttcatgctttgaattgcatttggaacacactccccattctctgt
gcgaccttgaaccggatggccgataattacttcgagcactttggagcacctacgcagccc
cacaccgaggatgtgttgatactaccgcagttgttggtctcctggatttcattcctcaca
caagcttttgaatcatttgtcttgggatcgagcccgaaggtatctcaacagaagaccaag
ttcattggtctccgtttgagaaatggctctcttcgtggagggccccagtttccagaaaat
ccttccgaacagaagccggccccgcgaacaccatacaacaatcgttttccgtcaggtctg
agcaagtactcgaccgcatccaactatacctcatctcttctgttatgcaggaaaattacc
aattggtctgtgcagtcctttcatgaatgcgtcgatgaactgttcaggcaccttcttcaa
ctactgagccacattctatccaagttcacttgcggttttgctgccttggaagaaattcat
atgcatcttttaaaccatggtataacagccaatctggtcgcggttgttgtcgactgctcc
gtgcgtttgttggatgcacaacaacaggtagatcgtcttcctcaaactccgccctttttt
cagcgaattgacaccctgtggacaacctacctccttccactgttctatcatgacgtatgg
tcacgaactgtgagacgtttcgttcgatccagaagcgttctaacgggtgtaccagaagtg
atgggtgatgtagacgttgtcacagtccccagattaccgcccgatgaaaacgacccgaat
cggccagtaattgattggacaaatctatcatccagtacatctatagacgaggggcttctc
gaacctgttgacttggtaccccggtgcctgcctgatctgggcacgagaatttctttcgct
atcgaggggcttctcgaacctgttgacttggtaccccggtgcctgcctgatctgggcacg
agaatttgctttcgctatcgaacagctgaccccgggctggcagccttcgtttggcctaaa
agtggcatccgtatggaggatgactgcaatccgctgtcacctgctcctggagatttctgt
tccctagccctcctcacctgcactgtctctgtcctcgagcgtattcttctgaattggcgt
tttcatctcgcttctgacagtggcgtgtcaccacacgtgtttgctccactgattggatgg
attcgccgactagttaggaagcgcccccttccatggctgcctggccactctggccgcaca
atgacatctttaccctacgcactcatcgccatggaatcttgtacacttggcaaagcggta
cttgtgctctcacagatcctaacacatcaatgtacgctgtcgtcacgattggcgcgtgaa
ccgtttgccgacgaagacaggtgtctacttcaccgtgccgcgcttcgactgttacctcta
cttcgaggtggacagaaacaattgttgtgtgctctgcaggatgaggtcgtgttttcccca
catcaaatcagatccttgtcaagtgatgctgtctccggtttgggcgatcaatttctacat
aacgttcttcaggtataccgaaaatatgcgtgtgggacaaacttggagggatcagtggag
gatgccgcgaaagaagatcgcagttcacatctaccagcgcttccagaggaatcagacatg
gatcaggatcaatcggttgctcgtgtatctcagccatctgcagatgtgtctagaatccaa
gctccaatcaattgttcagtcagcgtcgccagttctttgttgccacatgactggtcctac
gctcccctgattggccagtacctacaagccaaacgattggctaatgctggaatcacggct
agctcgaatgaaacggagcaacaggaatctttattcgacctaactgttggactgcgctgg
ctactgttcctttacgaaattcactcctgtcaggattcacctggcaactgtggtattctg
gatcctctggcgcatctaacccgtctgagtctcggttgtttgggctacgccggagccggc
ggtctcggttttggacaatctggagtcttgttggccaaactgatacatctggttggatcg
atgcgccgattacaacaaagttctaatcgcccctactcattggaaacggtcgatctaccc
ccattttgtgcctctttctatgatgtgtacacggaccttttgggacacttcgcggccctg
tcctacaattcccccgtttttgccaacctcatattgtggccatgtcagcaactttgtcac
atgaaataccgccgcgccctgtggggtgagcaccaaagcgctttggttgcagtccgctta
cgattggatcagcttctattgcctgtggatagctttttggacccggaagagacggatgaa
tcggtgctccgggtgtacgcgtccgcgctactctctggtggagtacgagtagacagacag
cccctactgtttctcattgccgtgcatcacatcaatcgctacctataccacgctcagaac
gccaagtccgctttcgtacaacagttttcacggctggttcgagcggcacctcaccatcag
gactctaatcggcaaaagccggctacatcgctacgagccaatgtgctggatatcattcgg
cactacaaacaaccaaactcagtctggaccgggcagaatccccaaattcttccggacgac
tgcctggctgtcggtgtcactgaccccctcgtcgtatgccaaggcgctcaccgcactttc
gaatcggattccgtcgcaacatttactacattggttgccaatgccggaattgaatgctac
tcaccgaaccaactcccagcacaccgcaaaaccttctgggaccagtatatttccacttga

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