Opisthorchis viverrini (Southeast Asian liver fluke): T265_14908
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Entry
T265_14908 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K20826
RNA polymerase II-associated protein 1
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ovi03021
]
T265_14908
Transcription machinery [BR:
ovi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
T265_14908
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPAP1_C
RPAP1_N
Motif
Other DBs
NCBI-GeneID:
20329074
NCBI-ProteinID:
XP_009174018
UniProt:
A0A074Z9J7
LinkDB
All DBs
Position
Unknown
AA seq
1739 aa
AA seq
DB search
LPLPHFFFCLTSPGLLLPFARLCEKGCSRKSVDWHKEHVIKPAKLWSVISSSFVDKLFPK
TIECISAMLILEYMTEGSEERYEKPSLDSLPTQATSLPSADPLSSFDIRERDLHEDDFEM
TFEDCPQTTSFPVAFRRSAVSVGESLTSNSSTKSIFAREMELRAVKRRPQQLHDPVSSDG
CALLNKGDGLEYLRAHGPQTVSGTGLGSRFREVERIHQENLTRLSHMSEDEIAKERELLL
SSMNPSMVAFLLHKNRRNIATNARPSRKEQVKSRFSLSRRPANDATSPLSDDPMVKGVAQ
LEEEKLEWTRDLPVTARRPPELHVVAGSQPCSSEDIEMNETHPENKTSKPCQARFDLCGL
VVPPDAVLDTHLGLHHHGEEPERAGYTIGELFHLSRSSVPAQRRLALATLATALGQTRRG
RHVHNLAPVSSPSLIWGLLSSSSDSVEGDGPGSGGGKGGVAFLLRWCLDESVSSLTSVGA
VSAGTDISISGHSGGASLGLTVECIRGLANLLCDADGESYLNSTHEWPLQMATKQHLFLA
PPTLQRKVPSRIPGVLQLTKAPAEEEPDHSEAMSLDPVFFLFTQGQLGQRLAWLLADEKG
NLRTKLPPDAVGLWLPALLVRAVRHSPALAYRVFSIPNLFRTLLDHYLPVCYGNDSTSAS
AVRPTRLSQATGIPFAAVMLLCRLTMLTSTSIRLAMVNDLRLIERCCSYLIPSEAEDCNH
LSEQWSPLSRLPPALPLKLAVQVHIEALRCLSACLVPLSDAESIPLHALNCIWNTLPILC
ATLNRMADNYFEHFGAPTQPHTEDVLILPQLLVSWISFLTQAFESFVLGSSPKVSQQKTK
FIGLRLRNGSLRGGPQFPENPSEQKPAPRTPYNNRFPSGLSKYSTASNYTSSLLLCRKIT
NWSVQSFHECVDELFRHLLQLLSHILSKFTCGFAALEEIHMHLLNHGITANLVAVVVDCS
VRLLDAQQQVDRLPQTPPFFQRIDTLWTTYLLPLFYHDVWSRTVRRFVRSRSVLTGVPEV
MGDVDVVTVPRLPPDENDPNRPVIDWTNLSSSTSIDEGLLEPVDLVPRCLPDLGTRISFA
IEGLLEPVDLVPRCLPDLGTRICFRYRTADPGLAAFVWPKSGIRMEDDCNPLSPAPGDFC
SLALLTCTVSVLERILLNWRFHLASDSGVSPHVFAPLIGWIRRLVRKRPLPWLPGHSGRT
MTSLPYALIAMESCTLGKAVLVLSQILTHQCTLSSRLAREPFADEDRCLLHRAALRLLPL
LRGGQKQLLCALQDEVVFSPHQIRSLSSDAVSGLGDQFLHNVLQVYRKYACGTNLEGSVE
DAAKEDRSSHLPALPEESDMDQDQSVARVSQPSADVSRIQAPINCSVSVASSLLPHDWSY
APLIGQYLQAKRLANAGITASSNETEQQESLFDLTVGLRWLLFLYEIHSCQDSPGNCGIL
DPLAHLTRLSLGCLGYAGAGGLGFGQSGVLLAKLIHLVGSMRRLQQSSNRPYSLETVDLP
PFCASFYDVYTDLLGHFAALSYNSPVFANLILWPCQQLCHMKYRRALWGEHQSALVAVRL
RLDQLLLPVDSFLDPEETDESVLRVYASALLSGGVRVDRQPLLFLIAVHHINRYLYHAQN
AKSAFVQQFSRLVRAAPHHQDSNRQKPATSLRANVLDIIRHYKQPNSVWTGQNPQILPDD
CLAVGVTDPLVVCQGAHRTFESDSVATFTTLVANAGIECYSPNQLPAHRKTFWDQYIST
NT seq
5220 nt
NT seq
+upstream
nt +downstream
nt
ttacccctgccccattttttcttttgtttgacttcccctggtttacttctacccttcgcg
agactgtgcgaaaagggctgttcgagaaagtccgtcgactggcataaggagcacgtgatc
aaaccagccaaactatggagtgtaatcagttcatctttcgtagataaattatttccgaaa
accatcgaatgcatctcagcaatgctgatcctagaatatatgacagaggggagtgaagag
cgttacgaaaagccctcgttagacagtttacccacacaagcaactagcttgcctagtgcg
gacccattgtcttctttcgatattagagagcgagacttacatgaagatgattttgagatg
actttcgaagactgcccgcagaccactagctttccggtggctttccgtcgttccgctgtg
agtgttggtgagtcactcacttcaaactcgagcaccaaaagcatattcgctcgagaaatg
gaattgcgtgccgtcaagcggcggccacagcagctgcacgatccggtctcttctgacggt
tgtgctctcctcaataaaggggacggacttgaataccttcgggcacacgggcctcaaacc
gtttctggcacggggcttggctctcgctttcgagaggtagaacgcattcatcaagaaaat
ctaacacgtctgtctcatatgtcggaggacgagattgcaaaagaacgtgaactgctgctc
tcctcaatgaatccatcaatggttgccttcttgttacacaagaatcgccggaacatcgca
actaatgcacgaccatcgcgaaaggagcaggtgaaatcaaggttctcgctttcgcgacgt
ccagcgaatgatgcgaccagtccattgtctgacgatccgatggttaagggggtagcgcag
ctagaagaggagaaacttgagtggacacgtgacctgccggtcacagctcgcagaccaccg
gaactgcatgtggtcgctggatctcagccatgttcatcggaagacatcgagatgaatgag
acccatccggagaacaagacgagtaaaccatgtcaggcccgatttgatctatgtggcttg
gttgttccaccggacgccgtacttgatacccacttgggtctgcatcaccatggggaggaa
ccagagcgtgcaggctacaccatcggtgagctgtttcatcttagccgctcaagtgtgcct
gctcaacgccgcctggctctggcaacgctggcaacggctctgggtcagacacgccgtgga
cgacatgttcacaacctcgcacctgtatcttcccccagtctaatctggggcctactttct
tcatcgagtgattcagttgaaggagatggacctggtagcggtggggggaagggtggagta
gcttttctgctacggtggtgtttagacgaatcggtgagttcgctcaccagtgttggggca
gtttcagccggcaccgatatctcgattagtgggcattcgggtggtgcatcacttggtctg
acggtggaatgcatccgtggtctggcgaacttgttgtgtgatgccgatggagagagctat
ttgaacagtacccatgagtggcccttgcaaatggccaccaaacagcatctatttttggca
ccaccaacgcttcagcgaaaagttccgtcaagaattcccggtgttctccagttgactaaa
gcaccggcggaagaggaacccgaccacagtgaggctatgtctctggacccggtgtttttt
ctcttcactcaaggtcagttgggtcagcgtttggcctggctcttggctgacgaaaaggga
aatttgaggacaaagctgccaccggacgctgtcggtctgtggcttccagctttgttagtt
cgcgcagttcgacactcacccgctctggcctaccgagttttttccatacccaatctgttt
cggacacttttggaccactacttgcccgtgtgttatggcaatgactcaacttctgcatca
gctgttcgaccgacacgtctgtctcaggctaccggtattccttttgcagctgtgatgctg
ttgtgtcgcttgacaatgcttacaagtacaagtattcgattggcgatggtaaacgacctc
cgcctgatcgaacgatgctgttcttatctcatcccctctgaagccgaggactgcaaccat
ctctcggagcaatggtccccgctctcccggttgccacccgcccttccgctcaaactggcc
gtgcaggtgcacattgaagctcttcgatgtctctccgcctgtctagttcccctgtctgat
gcagagtctattccgcttcatgctttgaattgcatttggaacacactccccattctctgt
gcgaccttgaaccggatggccgataattacttcgagcactttggagcacctacgcagccc
cacaccgaggatgtgttgatactaccgcagttgttggtctcctggatttcattcctcaca
caagcttttgaatcatttgtcttgggatcgagcccgaaggtatctcaacagaagaccaag
ttcattggtctccgtttgagaaatggctctcttcgtggagggccccagtttccagaaaat
ccttccgaacagaagccggccccgcgaacaccatacaacaatcgttttccgtcaggtctg
agcaagtactcgaccgcatccaactatacctcatctcttctgttatgcaggaaaattacc
aattggtctgtgcagtcctttcatgaatgcgtcgatgaactgttcaggcaccttcttcaa
ctactgagccacattctatccaagttcacttgcggttttgctgccttggaagaaattcat
atgcatcttttaaaccatggtataacagccaatctggtcgcggttgttgtcgactgctcc
gtgcgtttgttggatgcacaacaacaggtagatcgtcttcctcaaactccgccctttttt
cagcgaattgacaccctgtggacaacctacctccttccactgttctatcatgacgtatgg
tcacgaactgtgagacgtttcgttcgatccagaagcgttctaacgggtgtaccagaagtg
atgggtgatgtagacgttgtcacagtccccagattaccgcccgatgaaaacgacccgaat
cggccagtaattgattggacaaatctatcatccagtacatctatagacgaggggcttctc
gaacctgttgacttggtaccccggtgcctgcctgatctgggcacgagaatttctttcgct
atcgaggggcttctcgaacctgttgacttggtaccccggtgcctgcctgatctgggcacg
agaatttgctttcgctatcgaacagctgaccccgggctggcagccttcgtttggcctaaa
agtggcatccgtatggaggatgactgcaatccgctgtcacctgctcctggagatttctgt
tccctagccctcctcacctgcactgtctctgtcctcgagcgtattcttctgaattggcgt
tttcatctcgcttctgacagtggcgtgtcaccacacgtgtttgctccactgattggatgg
attcgccgactagttaggaagcgcccccttccatggctgcctggccactctggccgcaca
atgacatctttaccctacgcactcatcgccatggaatcttgtacacttggcaaagcggta
cttgtgctctcacagatcctaacacatcaatgtacgctgtcgtcacgattggcgcgtgaa
ccgtttgccgacgaagacaggtgtctacttcaccgtgccgcgcttcgactgttacctcta
cttcgaggtggacagaaacaattgttgtgtgctctgcaggatgaggtcgtgttttcccca
catcaaatcagatccttgtcaagtgatgctgtctccggtttgggcgatcaatttctacat
aacgttcttcaggtataccgaaaatatgcgtgtgggacaaacttggagggatcagtggag
gatgccgcgaaagaagatcgcagttcacatctaccagcgcttccagaggaatcagacatg
gatcaggatcaatcggttgctcgtgtatctcagccatctgcagatgtgtctagaatccaa
gctccaatcaattgttcagtcagcgtcgccagttctttgttgccacatgactggtcctac
gctcccctgattggccagtacctacaagccaaacgattggctaatgctggaatcacggct
agctcgaatgaaacggagcaacaggaatctttattcgacctaactgttggactgcgctgg
ctactgttcctttacgaaattcactcctgtcaggattcacctggcaactgtggtattctg
gatcctctggcgcatctaacccgtctgagtctcggttgtttgggctacgccggagccggc
ggtctcggttttggacaatctggagtcttgttggccaaactgatacatctggttggatcg
atgcgccgattacaacaaagttctaatcgcccctactcattggaaacggtcgatctaccc
ccattttgtgcctctttctatgatgtgtacacggaccttttgggacacttcgcggccctg
tcctacaattcccccgtttttgccaacctcatattgtggccatgtcagcaactttgtcac
atgaaataccgccgcgccctgtggggtgagcaccaaagcgctttggttgcagtccgctta
cgattggatcagcttctattgcctgtggatagctttttggacccggaagagacggatgaa
tcggtgctccgggtgtacgcgtccgcgctactctctggtggagtacgagtagacagacag
cccctactgtttctcattgccgtgcatcacatcaatcgctacctataccacgctcagaac
gccaagtccgctttcgtacaacagttttcacggctggttcgagcggcacctcaccatcag
gactctaatcggcaaaagccggctacatcgctacgagccaatgtgctggatatcattcgg
cactacaaacaaccaaactcagtctggaccgggcagaatccccaaattcttccggacgac
tgcctggctgtcggtgtcactgaccccctcgtcgtatgccaaggcgctcaccgcactttc
gaatcggattccgtcgcaacatttactacattggttgccaatgccggaattgaatgctac
tcaccgaaccaactcccagcacaccgcaaaaccttctgggaccagtatatttccacttga
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integrated database retrieval system