Odocoileus virginianus (white-tailed deer): 110121526
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Entry
110121526 CDS
T10722
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04390
Hippo signaling pathway
ovr04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
110121526 (SOX2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
110121526 (SOX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ovr03000
]
110121526 (SOX2)
Transcription factors [BR:
ovr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
110121526 (SOX2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
110121526
NCBI-ProteinID:
XP_020724388
UniProt:
A0A6J0VHI4
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All DBs
Position
4:complement(27184246..27187543)
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AA seq
320 aa
AA seq
DB search
MYNMMETELKPPGPQQTSGGGGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRGQRR
KMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTK
TLMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMMQDQ
LGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMAL
GSMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQH
YQSGPVPGTAINGTLPLSHM
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggagacggagctgaagccgccgggcccgcagcaaacttcggggggc
ggcggcggcggcggcggcaactccaccgcggcggcggcaggcggcaaccagaagaacagc
ccggaccgcgtcaagcggcccatgaacgcctttatggtgtggtcccgcgggcagcggcgc
aagatggcccaagagaaccctaagatgcacaactcggagatcagcaagcgcttgggcgcc
gagtggaaacttttgtcggagacggagaagcggccgttcatcgacgaggccaagcggctg
cgagcgctgcacatgaaggagcacccggattataaataccggccccggcggaaaaccaag
acgctcatgaagaaggataagtacacactgccgggagggcttctcgccccaggcggcaac
agcatggcgagcggggtcggggtgggcgccggcctcggcgcgggcgtgaaccagcgcatg
gacagctacgcgcacatgaacggctggagcaacggcagctacagcatgatgcaggaccag
ctgggctacccgcagcacccgggcctcaatgcgcacggcgccgctcagatgcagcccatg
caccgctacgacgtgagcgccctgcagtacaactccatgaccagctcgcagacctacatg
aacggctcgcccacctacagcatgtcctattctcagcagggcacccctggcatggcgctt
ggctccatgggctcggtggtgaagtccgaggccagctccagcccccccgtggttacctct
tcttcccactccagggcgccctgccaagccggggacctccgggacatgatcagcatgtac
ctccccggcgccgaggtgccggagcccgccgccccaagcagacttcacatgtcccagcac
taccagagcggcccggtgcccggcacggccattaacggcacactgcccctctcgcacatg
tga
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