Odocoileus virginianus (white-tailed deer): 110121536
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Entry
110121536 CDS
T10722
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04360
Axon guidance
ovr04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
110121536 (ROBO1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
110121536 (ROBO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ovr04515
]
110121536 (ROBO1)
Cell adhesion molecules [BR:
ovr04515
]
Immunoglobulin superfamily
ROBO family
110121536 (ROBO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
C2-set_3
Unc5_NetrinR_N
Ig_PDGFR_d4
DUF7908
Big_4
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
110121536
NCBI-ProteinID:
XP_070311158
UniProt:
A0ABM4H6H9
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All DBs
Position
25:26966672..28193846
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AA seq
1669 aa
AA seq
DB search
MAVLLLLLLLTAEITSPVGVSGRMKAGSRWRGEKNHPEDVERGKDTGTPIPTSDNDDNSL
GYTGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDD
PRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQ
NPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSD
AGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVR
WRKDDGELPKSRYEIRDDHTLKIRKVTASDMGSYTCVAENMVGKAEASATLTVQEPPHFV
VKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLT
ITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLVL
SCVATGSPVPTILWRKDGVLVSTQDSRIKQLETGVLQIRYAKLGDTGRYTCIASTPSGEA
TWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSY
IIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKT
QDVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSIEVHWTVDQQSQYIQGYKVLYRPS
GANHGESEWLVFEVRTPTKNSVVIPDLKKGVNYEIKARPFFNEFQGADSEIKFAKTLEEA
PSAPPQSVTVSKNDGNGTAILVSWQPPPEDNQNGMVQEYKVWCLGNETRYHINKTVDGST
FSVVIPSLVPGIRYSVEVAASTGAGSGVKSEPQFIQLDSHGNPVSPEDQVSLAQQISDVV
KQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGGE
AVSSGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCTAGNGNSDGNLTTYSRPAD
CIANYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVNPSGQPTPYA
TTQLIQSNLSNNMNNGSGESGEKHWKPPGQQKQEVASIQYNIMEQNKLNKDYRANDTIAP
TIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMSWADLLPPPPAHPP
PPSNSEEYSMSVDESYDQEMPCPVPPARMYLQQGELEDEEDERGPTPPVRGAASSPAAVS
YSHQSTATLTPSPQEELQPMLQECPEELGHGQHQPDRRRQPVSPPPPPRPLSPPHTYGYI
SGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGW
GSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHA
SQCPRPTSPVSTDSNMSAAIVQKARPAKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPT
AQSKAQLEVRPVMVPKLPSIEARTDRSSDRKGGNYKGREVLDGRQVADMRPNPGDPREAQ
EQPNDGKGRGTKAAKRDLPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGS
RQREQANVGRRNIAEMQVLGGYEREDNNEELEELISFRKLKAEDNQRGL
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atggctgttctgttgctgctgctgctcttgacggcagaaataacttctcctgtgggtgtc
tcaggcagaatgaaagctggatcaaggtggagaggtgaaaagaatcaccctgaagacgta
gagaggggaaaagacaccgggacgcccatccccacctctgataacgatgacaattcgctg
ggctatacaggctcccgtcttcgtcaggaagattttccacctcgcattgttgaacaccct
tcagatctaattgtatcaaaaggagaacctgcaactttgaactgcaaagctgaaggtcgc
cccacacccaccatcgaatggtacaaaggtggggagagagtggaaacagacaaagatgac
cctcgttcacaccgaatgttgctgccaagtggatctttatttttcttacgtatagtgcat
ggacgaaaaagtaggcctgatgaaggggtctacgtctgtgtagcaaggaattacctcgga
gaggctgtgagtcacaatgcatcgctggaggtagccatacttcgggatgacttcagacaa
aacccttccgatgtcatggtggccgtgggagagcctgccgtgatggaatgccagccccca
cgaggccatcccgaacccaccatttcatggaagaaagatggctctccactggatgataaa
gatgaaagaataactatacgaggaggaaagctcatgattacttacacccgcaaaagtgat
gcaggcaaatatgtttgtgttggtaccaacatggttggggagcgtgagagtgaagtagca
gagctcactgtgttagagagaccgtcctttgtgaagagacctagtaacttggcagtcact
gtggatgacagtgcggaatttaaatgtgaggcccgaggtgaccctgtgcccaccgtacga
tggaggaaagatgatggggagctgcccaagtccagatatgaaatcagagatgatcatacc
ttgaaaattcggaaggtgacagctagtgacatggggtcatatacttgtgttgcagagaat
atggttggaaaagctgaagcatcagctactctgacggtccaagaacctccacatttcgtt
gtgaaaccccgtgaccaggtggttgccttgggacgaacggtcactttccagtgtgaagca
acaggaaacccccaaccagctatcttttggaggagagagggaagtcagaatctgcttttc
tcatatcagccaccacagtcatccagccgtttttcagtctcccagactggtgacctcact
attactaacgtccagcgatctgatgttggttattatatctgccagactttgaatgttgcc
ggaagtatcatcacaaaagcatatttggaagttactgatgtgattgcagaccgacctccc
ccagtcattcgacaaggtcctgtgaatcaaactgtagcagtggatggtactttagtgctc
agctgtgtggccacaggcagtccagtgcccacaattctgtggagaaaggatggagtcctt
gtttcaacccaagattctcgaatcaaacagctggagaccggagtactacagatccgatat
gctaagctgggtgatactggtcgatacacgtgcattgcatcaacccccagtggtgaagca
acgtggagtgcttacattgaagtccaagagttcggagttccagttcagcctccaagaccc
actgacccaaatttaatccctagtgccccctcaaaacctgaagttacagatgtcagccga
aatacagtaacgttgtcatggcaaccaaatttgaattcaggtgcaactccaacgtcttat
attatagaagccttcagccatgcatctggtagcagctggcagaccgtagcagagaatgtg
aaaacagaaacattcgccattaaaggactcaaacctaatgcaatttaccttttccttgtg
agggcagctaatgcatatggaattagtgatcccagccagatatcagacccagtgaagaca
caagatgttcccccgaccagtcagggggtggatcacaagcaggtccagcgagaactggga
aatgttgttctgcatctccacaaccccaccatcctttcctcctcttcaatcgaagtgcac
tggacagtggaccaacagtctcagtatattcaaggatacaaagttctttaccgcccgtct
ggagccaaccatggtgaatccgagtggttagtttttgaagtgaggaccccaaccaaaaat
agtgtggttatccctgatctcaaaaaaggagtcaactatgaaattaaggctcgtcctttt
tttaatgaatttcaaggagcagatagtgaaattaaatttgccaaaaccctagaagaagca
cccagtgccccacctcaaagtgtaactgtatcaaagaatgatggaaatggaactgcaatt
ctggttagctggcaaccacctcctgaagataatcaaaatggaatggtccaagagtataag
gtttggtgtctgggcaatgaaacgcgataccatataaacaagacagtcgatggttccacc
ttttctgtggttattccctcactggttcctgggatccgatacagtgtagaggtggcagcc
agcacgggggccgggtcaggggtgaagagcgagccacagttcatccagttagattctcat
ggaaatcctgtgtcacccgaggaccaagtcagccttgctcagcagatctcagacgtagtg
aagcagccggctttcatcgcaggaattggggctgcctgttggatcatccttatggttttt
agcatctggctctatcgacaccgaaagaagagaaatgggctgactagtacttatgcgggt
atcagaaaagtcccgtcttttaccttcacaccaacagtaacttatcagagaggaggcgaa
gctgtgagcagtggagggaggccaggacttctcaacatcagtgaacctgccacgcagccg
tggctggcagacacatggcctaacactgggaataaccacaatgattgctccatcaattgc
tgcacggcaggcaatgggaatagtgatggcaacctgaccacgtatagtcgcccagctgat
tgtatagcaaattataacaaccaactggataacaaacaaacaaatctgatgctccctgag
tcaactgtttatggtgatgtggaccttagtaacaaaatcaatgagatgaaaaccttcaat
agcccaaatctgaaggatgggcgttttgtcaatccatcagggcagcccaccccttatgcc
accacccagctcatccagtcaaacctcagcaacaacatgaacaacggcagcggggagtct
ggtgagaagcactggaagccaccgggccagcagaaacaggaagtggcgtcgattcagtat
aacatcatggagcaaaacaaactgaacaaagattatcgcgcaaatgacacaattgctcca
actatcccgtacaaccagtcgtatgaccagaatactggaggatcctacaacagttcagac
cggggaagtagtacatcagggagtcaagggcataagaaaggggcacggacacccaaagtc
ccaaagcaaggcggcatgagctgggcagacctactgcctccgcccccagcgcatcctcct
cctcccagcaacagtgaagagtatagcatgtctgtggatgaaagctatgaccaagaaatg
ccatgccccgtgcccccagcgcggatgtatctgcaacaaggcgaactagaagacgaggaa
gatgagcgaggtcccacgccccctgtgcggggagccgcctcatctccggctgcagtgtcc
tacagccatcagtccaccgccactctcacgccctctccgcaggaagaactccagcccatg
ttacaggagtgccccgaggagctgggccatgggcagcaccagcctgaccgcagacggcag
ccggtgagccctcctccacctccaaggccgctttccccaccccacacctacggctacatt
tcaggaccccttgtctcagacatggatacggatgcgccagaagaggaagaagacgaagcc
gacatggaggtagccaagatgcagaccaggcggcttttgttacgtgggctggagcagacc
cccgcctccagtgtcggggacctggagagctctgtcactgggtccatgatcaatggttgg
ggctcggcctcagaggaggacaacatttccagcggacgctccagcgttagttcttctgat
ggctcttttttcactgatgctgattttgcccaggcggtcgcagcggccgcggagtatgct
ggtctgaaagtggcccggcgccaaatgcaggatgctgctggccgccgccattttcatgca
tcccagtgccctagacccacaagtcctgtttctacagacagcaacatgagtgctgccata
gtacagaaggccagaccagccaagaagcaaaaacaccagccaggacatctgcgcagagaa
gcctacacagatgatcttccacctccccctgtgccacctcctgctatcaagtcacccacc
gcccagtccaaggcccagctggaggtccgacccgtgatggtgccaaaactcccttctata
gaagcaagaacagacagatcatcagatagaaaaggaggcaattacaaggggagggaagta
ctggatggaagacaagttgctgatatgcgaccaaacccaggtgatcccagagaagcacag
gaacagccaaatgatgggaaaggacgaggaaccaaggcagccaaacgtgaccttccacca
gcaaagactcatctcatccaagaggatattctgccttactgtagacctacttttccgaca
tcaaataatcccagagatcctagttcttcaagttctatgtcatcaagaggatcaggaagc
agacaaagagaacaagcaaatgtaggtcgaagaaatattgcagagatgcaagttcttgga
ggatatgaaagagaagataataatgaagaattagaggaacttatctctttcaggaaactg
aaagctgaagacaaccagagaggattatga
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