Odocoileus virginianus (white-tailed deer): 110121691
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Entry
110121691 CDS
T10722
Symbol
PRDM4
Name
(RefSeq) PR domain zinc finger protein 4 isoform X1
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04722
Neurotrophin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09150 Organismal Systems
09156 Nervous system
04722 Neurotrophin signaling pathway
110121691 (PRDM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ovr03000
]
110121691 (PRDM4)
Transcription factors [BR:
ovr03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
110121691 (PRDM4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
Zn_ribbon_PRDM4
zf-C2H2
zf-C2H2_4
C2CH-3rd_BIRD-IDD
zf-C2H2_16
SET
zf-met
zf-C2H2_jaz
PyrI_C
Zn_ribbon_Com
Motif
Other DBs
NCBI-GeneID:
110121691
NCBI-ProteinID:
XP_070310092
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Position
23:42946484..42970721
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AA seq
808 aa
AA seq
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MHHRMNEMNLSPVGMEQLTSSSVSNALPVSGSHLGLAASPTHNAIPAPGLPVAIPNLGPS
LSSLPSALSLMLPMGIGDRGVMCGLPERNYTLPPPPYPHLESSYFRTILPGILSYLADRP
PPQYIHPNSINVDGNTALSIANNPSALDPYQSNGNVGLEPGIVSIDSRSVNTHGAQSLHP
ADGHEVALDTTITMENVSRVTSPISTDGMAEELTMDGVAGEHTQIPNGARSHEPLSVDSV
GSNLAAETVGHGGVMPMHGNGLELPVVMETDHIASRVSGMSDSALSDSIHTVAMSTNSVS
VALSTSHNLASLESVSLHEVGLSLEPVAVSSITQEVAMGTGHVDVSSDSLSFVPPSLQME
DSNSNKENMATLFTIWCTLCDRAYPSDCPDHGPVTFVPDSPIESRARLSLPKQLVLRQSM
VGADVVGVLPLLGVWTGETIPVRTCFGPLIGQQSHSMEVAEWTDKAVNHIWKIYHNGVLE
FCIITTDENECNWMMFVRKARNREEQNLVAYPHDGKIYFCTSQDIPPENELLFYYSRDYA
QQIGVPEHPDVHLCNCGKECSSYTEFKAHLSSHIHNHLPSHGHSSSHGPSHSKERKWKCS
MCPQAFISPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCALCDK
SFTQKAHLESHMVIHTGEKNLKCDYCDKLFMRRQDLKQHVLIHTQERQIKCPKCDKLFLR
TNHLKKHLNSHEGKRDYVCEKCTKAYLTKYHLTRHLKTCKGPTSSSSAQEEEEEDDSEEE
ELADSVGTEDCRIGSAVYPADDSLSAHK
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgcatcacaggatgaatgaaatgaacctgagtcctgtggggatggagcagctgacttca
tcctccgtgagcaatgccttgccagtctcagggagtcacctggggttggctgcctcaccc
actcacaatgccatccctgctccaggcttgccagtggcgattccaaacctgggtccctcc
ctgagctctctaccttctgctttgtctctgatgctcccaatgggtattggggatcgaggg
gtgatgtgtgggttacctgaaagaaactacaccctacctccaccaccttacccccacctt
gagagcagttacttcaggaccattctacctggcattttgtcttatttagctgacagacca
cctcctcagtatattcaccctaactccataaatgttgatggtaacacagcattatctatc
gccaataacccttcagcgctagatccctatcagtccaatggaaatgttggattagaacca
ggcattgtttcaatagactctcgctctgtgaacacacatggcgcccagagtcttcatccc
gctgatggtcatgaggtggccttggacacaacaatcaccatggagaacgtctctagggtc
accagcccaatctctacagatggaatggcagaagagctgacgatggatggtgttgcaggc
gagcacacccagatcccaaatggcgccagaagtcacgaacctctgtctgtggactctgtg
ggcagcaaccttgcagcagagactgtgggacatggtggtgtgatgcccatgcatgggaac
ggcctggagctccctgtggtcatggagacagaccacattgcaagccgggtcagcgggatg
tctgacagtgccctcagtgactccatccacaccgtggccatgagcaccaactctgtaagc
gtggcactctctacctcacacaacctcgcctccctagagtccgtttccctccatgaagtt
ggcctcagcctagaacctgtggctgtctcctccatcacccaggaggttgccatggggacg
ggtcatgtagatgtgtcttcagacagtctttcttttgtaccaccttcactgcaaatggaa
gactccaattcaaacaaggaaaatatggcaaccttgtttacaatttggtgcactctctgt
gaccgagcctatccctcagactgccctgatcacggaccggtgacttttgttcctgatagt
ccaatagagagcagagccaggctttctctcccaaagcagcttgttctccgccagtcaatg
gtgggagcagatgttgttggtgtccttccactgctaggtgtgtggactggagaaaccatc
cctgttcggacttgctttgggcctctcattggccagcaaagtcactccatggaagtagca
gaatggacagacaaggcggttaatcatatctggaagatataccacaatggtgtcctagaa
ttctgcatcattacaactgacgaaaatgaatgtaattggatgatgtttgtgcgcaaagcc
aggaatcgggaagaacagaatttggtggcttatccccatgatggaaaaatctacttctgc
acctcccaagatatccctcctgaaaatgaactgcttttttattacagccgggattatgct
cagcagattggtgttcctgaacacccagatgtgcacctctgtaactgtggcaaggagtgc
agttcctatactgagttcaaagcccacctgagcagccacatccataaccaccttcctagc
cacggccacagcagcagccacgggccgagccatagcaaagagaggaagtggaagtgctcc
atgtgcccccaggcttttatctctccttccaaacttcacgtccactttatgggtcacatg
ggtatgaagccccacaagtgcgatttctgtagcaaggctttcagtgatcccagcaacctg
cggacccacctcaagatacacacaggtcagaagaactacaggtgtgctttgtgtgacaag
tctttcacccagaaggctcacctggaatcccacatggtcatccacacgggggagaagaac
ctcaagtgtgactactgtgacaagctgttcatgcggaggcaggacctcaagcagcacgtg
ctcatccacacacaagaacgccagatcaagtgtcccaagtgtgacaagctgttcttaagg
acaaatcacttaaagaaacatctcaattcacatgaaggaaaacgggattatgtctgtgaa
aaatgtacaaaggcttatcttaccaaataccatctcacccgacacctaaaaacctgcaaa
gggcccacctccagttcatcggcacaggaggaggaggaggaagatgactcagaagaggaa
gagctggcggactcggtggggacagaggactgtcgcataggcagtgctgtgtatccagca
gatgactctctctctgcacataaatag
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