Odocoileus virginianus (white-tailed deer): 110121908
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Entry
110121908 CDS
T10722
Symbol
SPAM1
Name
(RefSeq) hyaluronidase PH-20
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr00531
Glycosaminoglycan degradation
ovr01100
Metabolic pathways
ovr04142
Lysosome
Module
ovr_M00076
Dermatan sulfate degradation
ovr_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
110121908 (SPAM1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
110121908 (SPAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
ovr02042
]
110121908 (SPAM1)
00536 Glycosaminoglycan binding proteins [BR:
ovr00536
]
110121908 (SPAM1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ovr00537
]
110121908 (SPAM1)
Enzymes [BR:
ovr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
110121908 (SPAM1)
Bacterial toxins [BR:
ovr02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
110121908 (SPAM1)
Glycosaminoglycan binding proteins [BR:
ovr00536
]
Heparan sulfate / Heparin
Enzymes
110121908 (SPAM1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ovr00537
]
Enzymes
110121908 (SPAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
Motif
Other DBs
NCBI-GeneID:
110121908
NCBI-ProteinID:
XP_020724860
UniProt:
A0A6J0VKV4
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All DBs
Position
1:complement(29420929..29442656)
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AA seq
554 aa
AA seq
DB search
MRMLRHQYISFRSFVGSSRTPQAVFTFLLLPCCLALDFRAPPLISNTSFLWAWNAPVERC
VNKRFKLPPDLRLFSVTGSPQKSATGQFITLFYADRLGYYPHIDEKTGNTVHGGIPQLGN
LKNHLEKAKNDIAYYIPNDSVGLAVIDWENWRPTWARNWKPKDVYRDESVELVLQKNPQL
NFPEASKIAKVDFEMAGKSFMQETLKLGKLLRPNHLWGYYLFPDCYNHNYNHPAYNGSCS
DLEKRRNDDLDWLWKESSALFPSVYLNIKLKSTPKAAFYVRNRVQEAIRLSKTASVESPL
PVFVYARPVFTDGSSTYLSQGDLVNTVGEIVALGASGIIMWGSLNLSLSMQSCMNLGNYL
NTTLNPYIINITLAAKMCSQVLCHDEGVCTRKHWDSSDYLHLNPESFAIQTGKDGKYTVP
GEVTLEDLQKFSDKFYCSCYANIHCKKRVDIKNVRSVNVCMAEGICIEGPVKLQPSDHSS
SQNEASATTSGSTSPSTTTAAVPPCTPEKQSPECLKAKCLEVISNVTQKGCQSVKWKNTP
GQSRIPSLKNQTTY
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgagaatgctaaggcaccagtatatctcctttaggagctttgttgggtctagcagaaca
ccccaagcagtattcaccttccttctgcttccatgttgtttggctctggacttcagagca
cctcctcttatttcaaacacttctttcctctgggcctggaatgcaccagttgaacgttgt
gttaacaaaagattcaaactaccaccagatctgagactcttctctgtaacaggaagcccc
caaaaaagtgctacaggacaatttattacattattttatgctgatcggctcggctactat
cctcatatagatgaaaaaacgggcaacaccgtacacggaggaattccccagttgggaaac
ttaaaaaatcatttggagaaagcgaaaaatgacattgcctattacataccaaatgacagt
gtgggcttggcggtcattgactgggaaaactggaggcctacctgggcaagaaactggaaa
cctaaagatgtttatagggatgagtctgttgagttggttctgcaaaaaaatccgcaactc
aatttcccagaggcttccaagattgcaaaagtggattttgagatggcaggaaagagtttc
atgcaagagactttaaaattgggaaaattacttcggccaaatcacttatggggttattat
ctttttcctgattgttacaatcataattataaccatcctgcttacaatggaagttgctct
gatttagaaaaaaggagaaatgatgatctcgactggttgtggaaggaaagctctgccctt
ttcccttccgtttatttgaatatcaagttaaaatctactccaaaagctgccttctatgtt
cgcaatcgtgtccaggaagccattcggttgtctaaaacagcgagtgttgaaagcccactt
ccggtttttgtatatgctcgtccagtttttactgatgggtcttcaacatacctttctcag
ggggaccttgtgaatacagttggtgagatcgttgctctaggtgcttctgggattataatg
tggggcagtctcaatctaagcctatctatgcaatcttgcatgaacctaggcaattacttg
aacactacactgaatccttacataatcaacatcaccctagcagccaaaatgtgcagccaa
gtgctttgccacgatgaaggagtgtgtacaaggaaacattgggattcaagcgactatctt
cacctgaacccagagagttttgctattcaaactgggaaagatggaaaatacacagtacct
ggggaagtcacacttgaagacctgcagaagttttctgataaattttattgcagttgttat
gccaacatccactgtaagaagagagttgatataaaaaatgttcgcagtgttaatgtatgt
atggcagaaggcatttgtatagaaggccctgtgaagttacaacccagtgatcattcctct
agccagaacgaggcatctgctaccacttccggcagtacctcaccctccactacaactgcc
gcggtaccgccatgtactcctgagaaacagtcccctgagtgcctcaaagccaagtgtttg
gaagtcatctccaacgtcacccaaaaggggtgtcaaagtgttaaatggaagaacactccc
ggtcagtcacgtattccaagtcttaaaaatcaaacaacctattaa
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