Odocoileus virginianus (white-tailed deer): 110122283
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Entry
110122283 CDS
T10722
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
ovr Odocoileus virginianus (white-tailed deer)
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ovr03036
]
110122283 (CHD6)
Chromosome and associated proteins [BR:
ovr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110122283 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
ResIII
DEAD
HTH_Hrp3
HDA2-3
MUN
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
110122283
NCBI-ProteinID:
XP_020725384
UniProt:
A0A6J0VMG5
LinkDB
All DBs
Position
9:complement(65407502..65601413)
Genome browser
AA seq
2721 aa
AA seq
DB search
MIMKIQKKEKQLSSLKVPNHSPMSDASVNFDYTSPSPFDHSTDQEEKIEDVASHCPAQKD
LYAVEEEAGPLFPRKTASHNGMEDSGGGGTGVKKKRKKKDPGEQEGAAKGSKDREPKPKR
KREPRELKEPRKAKEPRKAKEPREAKQKDGAKKARKPREAAGPREAKEKRGGPDSAARTK
SRKASKEQGPTPVEKKKKGKRKSETAVESLELDQGLPNPSLRSPEESTESADSQKRRSGR
QVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILAS
KTVQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKH
IFTEPDEDLFNPDYVEVDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDP
AKVKEFESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRK
NCILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYH
GSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEA
HRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFG
DLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFS
FLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQ
AAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQA
AIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSK
AVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGA
YGALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDP
NFWQKWAKIAELDTEAKSEKESLVLDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPT
RSRRLNDKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVY
CVKHYKGDEKIKSFIWELITPTKDGQAQTLQNHSGLSAPVPRGRKGKKTKNQLLLPELKN
ADWLATCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYYLKAEILGEAADKAFEGAPAREL
DVPLPDIDYVEIPVDWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKSL
SAEQGVTDGASDVPERGNTDKEDNTEDKVDGLQKQAESSSDGGDGLFAEKKDDTRAAQDG
SDPDKSPWPVSSALTARLRRLVTIYQRCNRKELCRPEVLGLGNQGYWVQEEMFRRSSEME
LINKEAQKRWTRREQADFYRTVSSFGVIYDQEKKTFDWTQFRVISRLDKKSDESLEHYFY
SFVSMCRSVCRLPAWKDGGPLDPSIYVEPITEERAARTLYRIELLRKVREQVLTCPQLHE
RLQLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYVMTDPQLSFLDAYRNYAQHKT
PDPQAPESLCCLYQTNSKLYESLAYTHMSQTSESLENEPENLVKIEGRDDHLGPPRGSLS
DMTCESFMSKTQDVLSLTHDESLLPGSLESMMYGKKALSQEAGPFQGSPGASTESRQDTA
AISAGRDGDCQTRGHEAKIASDSSFMETLEAGVAQMNIKNEKHLLMSLSKEGELGCSEAG
LRPESIGRLGSNCFASPSLDPGNESGFVDMCNLSVCDSRRNMSSDQQLIDLLESKSLESK
LVLGPNHSDEEEDEDENEEESLELAAGRRERLAASPLSEPTTRMAGEQSLAGFLTEEAKK
GSTEARSQPLGLQGPFLPAACQCHCKHMERWARGLEKDEFEVEKPQAYPPDPFISKANNV
TMRGEPTAVPPELFQVKQELLKDSWKENTEGNQGLPPYPEGSELKPEDMDYESKEEFDKD
GNCQSQDYPGKYSEEESKSSTSGVAGDLGDDLQEARAPTIAQLLQEKTLYSFSEWPKDRV
IINRLDNICHVVLKGKWPSSQQHEPSGALPTPLLAGSAGPRGGLSEPEASEHSFSNGAAL
AAQMQKENFLAPVFTKDEQKHRRPYEFEVERDAKTRSLEQFPAPHGHPPIVLNGWHGESA
IDLSCPSEGSPGATSPFPMSASTPKIGAIGSLQGALGMDLSGILQAGLIHPVTGQIVNGS
LRRDDTASRRRRGRRKHVDGGVDLIFLKEQTLQAGILEVHEDPGQAPLSTPHPPEGPVPA
TSTPEPTPAASSPAEKAIPSKSLLDWLRQQADCSLEVPGFSANFSDKPKQRRPRCKEPGT
LDVTSLSGEERVPAVPKEPGLRGFLPENKFNHTLPEPVLRDTGPRRRGRRPRSELLKTPA
LVADAPSGMGPLFMNGLIAGMDLVGLQNMRNVPGIPLTGLVGFPAGFAAMPPGEEVKSTL
SMLPMVLPGMAAVPQMFGVGGLLNAPMATTCTSAVPAPLSSTTKGGVSAAEKTAEDQPGS
HDVKTDPSAEDKPGPSPFSSDQPEPAITTSSPVAFNPFLIPGVSPGLIYPSMFLSPGMGM
ALPAMQQARHSEAAGLESQRRKRKKTKGDAPNPNPEPMPGPEREPGSEQSCPEPRAPAPP
DREHAAQAREGGPQDSLGDTN
NT seq
8166 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaaaatacagaagaaagagaagcagttgtcaagtctaaaagttccgaatcac
tccccaatgtctgatgcctctgtcaattttgactacacatccccctccccatttgaccac
agcactgaccaggaggagaaaattgaagatgtcgccagtcactgtccagcccagaaggac
ctgtacgctgttgaagaggaggccgggccccttttccccaggaaaacggcgtcccataac
ggtatggaggacagtggtggaggaggtacaggcgtgaagaagaaacgcaagaaaaaggat
ccaggggagcaggaaggggcagcaaagggaagcaaggacagggagcccaagccaaagagg
aagcgcgagcccagagagctgaaggagcccaggaaggccaaggagcccaggaaggccaag
gagcccagggaggccaagcagaaggacggcgccaagaaggcgcggaagccccgcgaggcc
gcgggccccagggaggccaaagagaagaggggcggccccgactctgcggccagaacgaag
tccaggaaggccagcaaggagcaaggaccaaccccagtggagaaaaagaagaaaggaaaa
aggaaaagtgaaaccgcagtggagagtttagagctggatcagggcctgccgaacccatcc
ctgcggagccccgaggagtccactgagtctgcagacagccagaaacgacgctcagggcgg
caagtgaagcgcagaaaatacaacgaggacttggacttcaaggtggtggacgatgacggg
gaaaccattgccgtgctcggggctggccggacatccgccctctcagcttctaccctggcc
tggcaggcggaggagcctccagaagatgacgcaaacatcattgagaagatcctggcatct
aagactgtccaggaggtccacccaggagaacccccattcgacctggagctgttctacgtc
aagtatagaaatttttcctacttacactgtaaatgggccacaatggaagaactcgaaaag
gaccctcgcatcgcacagaagatcaagcgatttaggaataaacaagcccagatgaagcac
atttttactgagcctgacgaagacttgttcaacccagactatgtggaggttgatcgaatc
ttagaggtggcccacaccaaggatgcagaaaccggagaggaagtgacgcattacctggtg
aagtggtgctcactgccttacgaagagagcacgtgggaactggaggaggacgtggatcct
gccaaagttaaagaattcgaatctctgcaagtgctccccgaaatcaagcacgtggagcga
cccgcgtcagactcctggcagaaactggagaagtcgcgagagtataagaacagtaaccag
ctccgggagtaccagctggaggggatgaactggcttctttttaactggtataacagaaaa
aactgcattttggccgatgagatgggcctagggaaaaccatccagtccatcacgttcctt
tcagaaatattcctcaggggcatccacggccctttcctcatcatcgccccactctccacc
attaccaactgggagcgggagttccggacgtggacagaaatgaatgccatcgtgtaccac
ggcagccagatcagcaggcagatgatccagcagtacgagatggtgtacagggatgcacag
ggaaaccccctttcaggcgtcttcaagttccatgttgtcattacaacatttgagatgatc
ctggcagactgcccagagctgaagaagattcactggagctgtgtgatcatcgatgaagcc
cacaggttgaagaacaggaactgcaagcttctggagggcctgaagctcatggccctggag
cataaggtgctgctcacgggaacgcccttgcagaactcggtggaggagctcttcagtctg
ctcaacttcctggagccatcacagttcccttcggagactgctttcttggaggagtttgga
gatctgaagacagaggagcaggtgaagaaactgcagtctatcctcaaaccgatgatgctt
cggcggctgaaagatgacgtggaaaagaacctcgctcccaaacaagagacgatcatcgaa
gtagagctgaccaatatccagaaaaagtactaccgtgccatcctggagaagaacttttcc
ttcctaaccaagggggccaaccagcacaacatgcccaatctcatcaacaccatgatggag
ctgaggaagtgctgcaaccacccctacctgatcaacggggcagaggagaaaattctggaa
gacttccggaaaacccacagccccgatgccccggactttcagctgcaggccatgatccag
gccgcagggaagctggtgctgattgataaactgctccctaagctgattgctggtggccac
aaagtgctcatcttctcacagatggtgcgctgtctcgacatcctggaagattatctcatc
cagagaagatacacctatgagcgaattgatgggcgagtacggggaaacctgcgccaggca
gccatcgaccggttctgtaagccagactcagaccgctttgtctttcttctgtgcacccga
gcgggaggcctggggatcaatctcacagctgccgatacctgcatcatatttgattcagac
tggaacccacaaaatgacttgcaggctcaggcccggtgtcaccggataggccagagtaaa
gccgtgaaggtgtatcgcctcatcacgcggaactcctacgagcgggaaatgttcgacaag
gccagcctgaagctgggcctggacaaggccgtccttcaggacatcaaccggaaaggcagc
acgaatggcgtacagcagctctcgaagatggaggtagaggacttgctccggaaaggtgcc
tatggcgccttgatggatgaagaggatgaaggctccaagttctgtgaagaagacatagac
cagatcctgcagaggaggacgcataccatcaccatccagtctgaggggaaaggatccact
ttcgccaaggctagctttgtggcttcaggaaacagaacggatatttccttagatgaccca
aacttttggcagaagtgggctaaaatagctgaactggacactgaagcaaagagtgagaag
gagagcctggtgctcgaccgcccgcgcgttcggaagcagaccaaacactacaactctttc
gaggaggacgagctcatggagttttcagagctggacagcgactctgacgagaggcccaca
aggtcccggcgcctcaatgacaaaaccaggcgctacctccgggccgagtgcttccgggtg
gagaagaacctgctcatcttcggctggggccggtggaaggacatcctgacgcacgggcgg
ttcaagtggcatctgaacgagaaggacatggagatgatctgccgggccctgctggtatac
tgcgtcaagcactacaaaggggacgagaagatcaagagcttcatctgggagctgatcacg
cccaccaaagacgggcaggcccagacgctccagaaccactcaggcttgtccgctccggtc
cccagagggaggaaggggaagaagacgaagaaccagctgctgctcccagagttaaagaac
gcagactggctggccacctgcaaccccgaggtggtcttacatgacgacggctacaagaag
cacctcaaacaacactgcaacaaggtccttctgcgagtccggatgctctactacctaaaa
gctgaaatactgggagaagcagccgataaagcatttgaaggagctccagccagggagctg
gatgtgcccctgcctgacatcgactacgtggagatcccggtggactggtgggacgccgag
gccgacaagtccctcctcattggcgtgttcaaacatggttacgagaggtacaacgccatg
cgagccgacccagcactttgcttcttggagaaggtgggcatgccagatgagaagtcgctt
tctgcagagcagggtgtcacggacggggcctcagacgtccctgaaagaggcaacacggat
aaagaagacaatacagaagacaaagtagatggcctccagaaacaagcggagagttccagt
gacggaggtgatggcctttttgctgaaaagaaggatgatacccgggcagcccaggatggc
tccgacccagacaaatcgccctggccggtctcatccgcactcactgctcgtctccgacgc
ttggtcaccatttaccagcgctgtaaccgcaaggagctctgccggcctgaagtcctggga
ctaggaaaccagggctattgggtccaggaagagatgttccggaggtcctcagagatggag
ctcatcaacaaggaagcccaaaagaggtggacgaggagggagcaagctgacttctacaga
acagtgtcttcctttggtgtcatttacgatcaagagaagaaaacctttgactggacgcag
tttcgcgtcatttcccgtctggacaagaagtcggacgagagcctggagcactatttctat
agcttcgtgtccatgtgccgcagcgtctgtcgtctgccggcctggaaggacggtggcccc
ctggatcccagcatctacgtggaacccatcacggaagagcgggctgcgagaacactgtac
cgcatcgagctgctgcggaaggtccgggagcaggtgctcacatgtcctcagctgcacgag
cgcctgcagctatgcaggcccagcctctacctgcctgtctggtgggagtgcgggaagcac
gaccgcgacctgctgatcggcactgccaagcacggcctgaaccgcaccgactactacgtc
atgactgacccccagctgtccttcctggacgcctacaggaactacgcccagcacaaaaca
cctgacccccaggccccagagagtctctgttgcctctaccagaccaactccaagctgtat
gagtctctggcctatacgcacatgagccagacttccgagtcccttgaaaacgaacccgag
aacctcgtgaaaatcgaaggtagagatgatcaccttggtccgcccaggggcagcttatct
gacatgacctgtgaaagcttcatgtctaaaactcaggatgtcctttccctcacccatgac
gagagtctgctgcctgggtccttggagagcatgatgtacgggaagaaggcgctaagccag
gaggcaggcccttttcagggcagcccgggtgccagtactgagtccaggcaagacaccgcg
gccatctccgcaggcagagacggggactgccagacccggggccacgaggcaaaaatagcc
tcagattcctcttttatggaaactttagaagcaggagtagctcagatgaacattaaaaac
gagaaacacctgttgatgtctctttcaaaggaaggggaactcggctgcagtgaggccggg
ctgagacctgaaagcatcgggcggctgggctccaactgcttcgcctccccttctttggac
ccagggaatgagagcgggttcgtcgacatgtgcaacctgagtgtctgcgactccagaaga
aacatgtcatctgaccagcagctaatcgacttactagaaagcaaaagcttagaaagcaaa
ttggttttgggtccgaaccacagcgacgaggaggaggacgaggacgaaaacgaggaggaa
agcctcgagctggccgcaggcaggcgggaaaggctggcggcgtcgcctctcagcgagccc
accacccgcatggcaggggagcagagcctggccggcttcctcacagaggaagccaagaaa
gggagcacggaggccagaagccagcctcttggacttcagggccctttccttcccgcagcc
tgtcagtgtcactgcaaacacatggagaggtgggcacgtggcctcgagaaggacgagttt
gaagtggagaaaccccaggcttaccccccagaccccttcataagcaaagccaataatgtc
acaatgaggggtgagcccactgctgtcccacccgagctgttccaagtgaagcaggaactt
ttgaaggattcctggaaagagaacacagaagggaaccaaggtcttcctccgtatcctgaa
gggagtgagctcaagccggaagacatggattatgagagtaaagaggagttcgataaagac
gggaactgccagagtcaagattatccagggaagtactctgaggaggagagcaagagctcg
acctcgggcgtcgcgggagacctcggggacgacctgcaagaggcgcgggctcccaccatt
gctcagctgctccaggagaaaacgctctattcattctccgagtggccgaaggatcgcgtg
ataatcaaccgcctagataacatctgtcacgtggtgttaaaggggaagtggccctccagc
cagcagcatgagccctcgggcgcactgcccaccccgttgttagccggcagcgctggtccc
cgaggcggcctctcggagccagaggcctcagagcacagcttcagcaatggtgcagcattg
gcggcccagatgcagaaggagaacttcttggctccggttttcacaaaggatgaacagaag
cacaggcgtccttacgagttcgaggtagagagggacgcgaagacgcggagcctggagcag
ttcccagccccccacgggcacccccctatcgtcctcaacggctggcatggagagtcagcc
atagacctctcctgcccgtcagaggggtccccgggggccacatcccctttcccaatgagt
gccagcacccccaagattggggctatcggttcactgcaaggagcccttggcatggacttg
tcgggcatcctgcaagctggcctgatccacccagtgactggacagatcgtcaacggaagc
ctcaggagagacgacactgcctccaggaggcggagaggaaggcggaaacatgttgacgga
ggggtggacctcatcttcctgaaggagcagaccctgcaggcgggcatcttggaagtccac
gaagacccaggacaggctcccctgagcaccccacaccctcccgaagggccggtgcccgcc
acgtcgaccccggagccgaccccggccgctagcagccccgccgagaaagccattcccagc
aagagcctgctggactggctgcggcagcaggccgactgctccctcgaggtcccaggcttc
agcgcgaatttttcagacaaaccaaagcagaggaggccacgctgtaaggagcctggaacg
ttagacgtcacttccctgagtggggaagagagggttcctgctgtccccaaggagcctggc
ctgagggggtttctcccagaaaacaagttcaatcacaccctgccagagcccgttctccga
gacacgggcccccgccgcaggggcaggcggccacggagcgagctgctgaagaccccggcc
ctagtggcggacgccccctccgggatggggccgctgttcatgaacggcctgattgccggg
atggacctggtcgggttgcagaacatgagaaacgtaccgggcatccccctcacggggctg
gtggggttcccggccggcttcgcggcgatgcccccaggcgaggaggtcaagagcacgctg
agcatgctgcccatggtgctgccgggcatggccgccgtgccccagatgttcggggtcggg
gggctcctcaacgcccccatggccaccacctgcacctcggccgtgccagcgccactgtca
agcacaaccaagggcggcgtgtcggcggccgaaaagactgcggaagaccagcccggcagc
catgacgtcaaaacggacccgtcggccgaagacaagcccggccctagccccttttcctcc
gaccagcccgagcccgcaataactacaagcagccccgtggcgtttaacccgttcctcatc
ccaggcgtttcccccggactcatctacccttccatgttcctctcccctggcatgggcatg
gcgctgccggccatgcagcaggccagacactccgaagcagcaggtctggagagccagagg
aggaagcggaagaaaaccaagggggatgccccgaaccccaacccagagcctatgcctggg
ccagagagggaaccgggcagcgaacagagctgcccagagcccagggctcccgcacccccc
gatagagaacacgcggcacaggcccgggaagggggcccccaggactctcttggtgacacc
aattag
DBGET
integrated database retrieval system
