KEGG T10722: 110122360

Odocoileus virginianus (white-tailed deer): 110122360

Entry

110122360         CDS       T10722

Symbol

SEM1

Name

(RefSeq) 26S proteasome complex subunit SEM1

K10881

26 proteasome complex subunit DSS1

Organism

ovr Odocoileus virginianus (white-tailed deer)

Pathway

ovr03050

Proteasome

ovr03440

Homologous recombination

ovr05010

Alzheimer disease

ovr05012

Parkinson disease

ovr05014

Amyotrophic lateral sclerosis

ovr05016

Huntington disease

ovr05017

Spinocerebellar ataxia

ovr05020

Prion disease

ovr05022

Pathways of neurodegeneration - multiple diseases

ovr05169

Epstein-Barr virus infection

Brite

KEGG Orthology (KO) [BR:ovr00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    110122360 (SEM1)
  09124 Replication and repair
   03440 Homologous recombination
    110122360 (SEM1)
09160 Human Diseases
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    110122360 (SEM1)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    110122360 (SEM1)
   05012 Parkinson disease
    110122360 (SEM1)
   05014 Amyotrophic lateral sclerosis
    110122360 (SEM1)
   05016 Huntington disease
    110122360 (SEM1)
   05017 Spinocerebellar ataxia
    110122360 (SEM1)
   05020 Prion disease
    110122360 (SEM1)
   05022 Pathways of neurodegeneration - multiple diseases
    110122360 (SEM1)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ovr03019]
    110122360 (SEM1)
   04131 Membrane trafficking [BR:ovr04131]
    110122360 (SEM1)
   03051 Proteasome [BR:ovr03051]
    110122360 (SEM1)
   03400 DNA repair and recombination proteins [BR:ovr03400]
    110122360 (SEM1)
Messenger RNA biogenesis [BR:ovr03019]
Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     110122360 (SEM1)
Membrane trafficking [BR:ovr04131]
Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    110122360 (SEM1)
Proteasome [BR:ovr03051]
Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     110122360 (SEM1)
DNA repair and recombination proteins [BR:ovr03400]
Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     110122360 (SEM1)

SSDB

Motif

Pfam:

DSS1_SEM1

Other DBs

NCBI-GeneID:

110122360

NCBI-ProteinID:

XP_020725488

UniProt:

A0A6J0VK89

LinkDB

Position

1:98048409..98070912

AA seq 70 aa
MSEKKQPVDLGLLEEDDEFEEFPAEDWAGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAEL
EKHGYKMETS

NT seq 213 nt +upstreamnt +downstreamnt
atgtcagagaaaaagcagccggtagacttgggtctcctggaggaggacgacgagttcgag
gagttccctgcggaagactgggctggtttagatgaagatgaagatgcacacgtctgggag
gataattgggatgatgataatgtagaggatgacttctccaatcagttaagagctgaacta
gagaaacatggttataagatggagacctcatag

DBGET integrated database retrieval system