Odocoileus virginianus (white-tailed deer): 110122851
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Entry
110122851 CDS
T10722
Symbol
PSMA6
Name
(RefSeq) proteasome subunit alpha type-6 isoform X1
KO
K02730
20S proteasome subunit alpha 1 [EC:
3.4.25.1
]
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03050
Proteasome
ovr05010
Alzheimer disease
ovr05012
Parkinson disease
ovr05014
Amyotrophic lateral sclerosis
ovr05016
Huntington disease
ovr05017
Spinocerebellar ataxia
ovr05020
Prion disease
ovr05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
110122851 (PSMA6)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
110122851 (PSMA6)
05012 Parkinson disease
110122851 (PSMA6)
05014 Amyotrophic lateral sclerosis
110122851 (PSMA6)
05016 Huntington disease
110122851 (PSMA6)
05017 Spinocerebellar ataxia
110122851 (PSMA6)
05020 Prion disease
110122851 (PSMA6)
05022 Pathways of neurodegeneration - multiple diseases
110122851 (PSMA6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ovr01002
]
110122851 (PSMA6)
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ovr03051
]
110122851 (PSMA6)
Enzymes [BR:
ovr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
110122851 (PSMA6)
Peptidases and inhibitors [BR:
ovr01002
]
Threonine peptidases
Family T1: proteasome family
110122851 (PSMA6)
Proteasome [BR:
ovr03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
110122851 (PSMA6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
AMIN-like
Ribophorin_II
Motif
Other DBs
NCBI-GeneID:
110122851
NCBI-ProteinID:
XP_020726079
UniProt:
A0A6J0VRD8
LinkDB
All DBs
Position
16:complement(29955578..29990643)
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AA seq
246 aa
AA seq
DB search
MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL
LDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIAD
ISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLE
KKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLV
ALAERD
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggggttccagcgctggttttgaccgacacattaccattttttctcctgaggga
cggctctaccaagtagaatatgcttttaaggctattaaccagggtggccttacatcagta
gctgtcagagggaaagactgtgcagtaattgtcacacagaagaaagtacctgacaaatta
ctggattccagcacagtgactcacttattcaagataactgaaaacattggctgtgtgatg
acaggaatgacagctgacagtagatcccaggtacagagggcacgctatgaggcagctaat
tggaaatacaagtatggttacgaaattcccgtggacatgctgtgtaaaagaattgctgat
atttctcaggtctacacacagaatgctgaaatgaggcctcttggttgttgtatgatttta
attggtatagatgaagaacaaggccctcaggtgtacaagtgtgatcctgcaggttactat
tgtgggtttaaagcaactgctgcaggagttaaacaaactgagtcaaccagcttccttgaa
aaaaaagtaaagaagaaatttgattggacctttgaacagacagtggaaactgcgattaca
tgcctgtctactgttctatcaattgatttcaaaccttcagaaatagaagttggagtagtt
acagtcgaaaatcctaaattcaggattcttacagaagcagagattgacgctcaccttgtt
gctctagcagagagagactag
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