Odocoileus virginianus (white-tailed deer): 110122973
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Entry
110122973 CDS
T10722
Symbol
TWNK
Name
(RefSeq) twinkle mtDNA helicase
KO
K17680
twinkle protein [EC:
5.6.2.3
]
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
110122973 (TWNK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ovr03029
]
110122973 (TWNK)
Enzymes [BR:
ovr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
110122973 (TWNK)
Mitochondrial biogenesis [BR:
ovr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
110122973 (TWNK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
DnaB_C
ATPase
AAA_22
AAA_16
AAA_29
T2SSE
AAA_23
AAA_19
TsaE
ABC_tran
nSTAND3
cobW
RsgA_GTPase
SMP_C2CD2L
PhoH
Motif
Other DBs
NCBI-GeneID:
110122973
NCBI-ProteinID:
XP_020726306
UniProt:
A0A6J0VLN9
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All DBs
Position
7:5021236..5026578
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AA seq
684 aa
AA seq
DB search
MWVLLRSGYPLRILLPLRGAWMGRRGLPRSFAPGPPRRRYRKEALPALEAPVLPVTTTEI
RQYLRARGIPFQDGHSCLRAPSPFVGASKLKDQTGAATSFSLFIDKTTGRFLCMTTLAEG
SWEDFQASVEGQGDGAREGVLLSEAPEAEDSEEVRRIWDRAIPLWELPEPEEAQLARMMF
GLTKVTDDTLKRFSVRYLRPARRLVFPWFSPGGLGLRGLKLLGAETQGGGVQYVETTIPR
PGAYHNLFGLPLISRRDVEVVLTSRELDSLALSQSTGLPTLALPRGTACLPPALLPYLEQ
FRRVVLWLGNDLRSWEAAKLFARKLNPKRCSLVRPGDQQPSPLEALNQGLNLSRILRTAL
PAWHKSIVSFRQLREEVLGELSNVEQAAGVRWSRFPDLNRLLKGHRKGELTVFTGPTGSG
KTTFISEYALDLCTQGVNTLWGSFEISNVRLARVMLTQFAVGRLEEQLDKYDEWADRFED
LPLYFMTFHGQQSIRTVIDTMQHAVYVYDICHVVIDNLQFMMGHEQLSTDRIAAQDYIVG
AFRKFATDSSCHVTLVIHPRKEDDDKELQTASIFGSAKASQEADNVLILQDRKLVTGPGK
RYLQVSKNRFDGDVGVFPLEFNKSSLTFSIPPKSKARLKKIKDDNGLVAKKPSSGKKGAM
PQISDTCSNQARNPNQPDFSKPSR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtcctcctccgaagcggataccccctccgcatcctgctgcccctgcgtggggcg
tggatgggacggagaggcctgccccgaagcttcgcccctggcccgcctcgcagacggtac
aggaaggaggctcttcccgccttggaggcaccagtgttgcctgtaaccacaactgaaatc
cgccagtatttgcgggcccgtgggatccccttccaggatggacacagctgcctgcgggca
ccgagtccttttgtgggggcctcaaagctcaaggaccagactggtgcagccacttctttc
agcctgttcattgacaagaccacgggccgctttctctgcatgaccaccctagcagagggg
agctgggaagacttccaggccagcgtggaggggcaaggggatggggccagagaaggggtc
ctactcagtgaagccccagaagctgaggacagtgaggaggtccggaggatctgggaccga
gccatacctctctgggagctgcctgagccagaggaggcccagctagctcgcatgatgttt
ggcctcaccaaagtgacagatgacacacttaagcggttcagcgtgcgctatctgcggcct
gctcgcaggcttgtcttcccttggttctcccctggaggcttgggattgcgaggcctgaag
ctactaggggccgaaacccagggcggtggggtgcagtatgtggagaccaccattccccgg
cctggtgcctaccacaacctgtttgggttaccactgatcagtcgacgagatgttgaagtg
gtattgacgagtcgtgagctggacagtctggccttgagccagtccacagggctgcccact
ctagccctaccccgaggaacagcctgcttaccccctgccctgcttccttacctcgaacag
ttccgacgggttgtgctctggctggggaatgaccttcggtcctgggaagctgccaagttg
tttgcccgaaaactgaaccccaaacgatgctccttggtgcggcctggggaccagcagccc
tctcccctggaggctctgaaccaaggcttaaacctttctcgtatcctgcgtactgccctg
cccgcctggcacaagtctatcgtgtctttccggcagcttcgggaggaggtgctaggagaa
ctgtcaaacgtggagcaggcagctggtgttcgctggagccgcttcccagacctcaatcgt
ctcttgaagggacatcggaagggcgagctgacagtcttcacagggccaacaggcagtgga
aaaacaacattcatcagtgagtatgccctggatttgtgtacccaaggagtgaacacgctg
tggggtagctttgagatcagcaacgtgagactagcccgtgtcatgctgacacagttcgct
gtgggacgactggaagagcaactcgacaaatatgatgagtgggctgaccgctttgaggac
ttgcccctctatttcatgacttttcatgggcaacagagcatcaggactgtaatagacaca
atgcaacatgcagtctatgtttacgacatttgtcatgtggtcatcgacaatctgcagttc
atgatgggtcatgagcagctatccacagacaggattgcagctcaagactacattgtcggg
gcctttcggaagtttgcaacagacagtagctgccatgtaacactggtcattcacccccga
aaagaggatgatgataaagaactacagacagcatccatttttggctcagccaaagcaagc
caggaagcagacaatgttctgatcctgcaggacaggaaactggtaactggaccagggaaa
cggtatctgcaggtgtccaagaaccgctttgatggagatgtaggtgtcttcccacttgaa
ttcaacaagagttctctcaccttctccataccaccaaagagcaaggcccggctcaagaag
atcaaggatgacaatggactagtggccaaaaaaccctcttctggcaaaaagggggctatg
ccccagatctctgacacttgttccaaccaggcccgcaaccccaaccagccagacttctcc
aagccttcaagatga
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