Odocoileus virginianus (white-tailed deer): 110122995
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Entry
110122995 CDS
T10722
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110122995 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ovr04131
]
110122995 (VPS8)
Membrane trafficking [BR:
ovr04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
110122995 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_VPS8_2
Beta-prop_WDR36-Utp21_1st
zf-RING_Vps41
TPR_Vps41
WD40_CDC20-Fz
zf-RING_11
zf_RING_Vps8_fungal
zf-RING_2
Beta-prop_WDR3_1st
zf-C3H2C3
zf-RING_UBOX
zf-RING_5
Beta-prop_WDR5
zf-C3HC4
EIF3I
PHD
Motif
Other DBs
NCBI-GeneID:
110122995
NCBI-ProteinID:
XP_070322384
UniProt:
A0ABM4I3I8
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All DBs
Position
4:complement(24089460..24473692)
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AA seq
1426 aa
AA seq
DB search
MENEPDHENVEQSLCAKTTDEELNKSFSLEASLSKFSYIDLDKELEFRNDLIDDKEFDIP
QVDTPPTLESILNETDDEDESFVLEDPTLLNIDTIDSHSYDTSSVASSDSGDRTNLKRKK
KLPDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFDQ
NQALRLCLGSTSVGGQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDAHP
PGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEPLH
SKPELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVAVH
NYVNPMLAFCRGDVVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTIVLLDSVE
KLHVIDRQTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSYGG
QIFYLGTKSVYVMMLRSWRERVDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDANKRK
AIVADRMVEILLHYADRALKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLQRKDLLFSQVY
DKLSENSVAKGVFLECLEPYILSDKLVGITPQVMKDLIVHFQDKKLMENVEALIVHMDIT
SLDIQQIVLMCWENRLYDAMIYVYNRGMNEFISPMEKLFRVIAPPLNAGKTLTDEQVVMG
NKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSTEAPPEEEIYPYIRTLLH
FDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQL
AKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMAEK
AEFYQICEFMYEREHQYDKIIDCYIRDPLREEEVFNYIHNILSIPGYSAEEKQSVWQKAM
DHIEELVALKPCKAAELVATHFSEQIETVLKKLQNQVLLFKFLRSLLDPREGIHVNQESL
QISPCIIEQFIELLCQFSPNHVIETLQVLECYRLEETIQITQKYQLCEVTAYLLEKKGDI
HGAFLIMLKRLQSKLQEITHQDENTKENPSLKDVEETMVETIALCQRNSHNLNQQQREAL
WFPLLEAMMAPQKLSSSAAPHPHSEALKSLTMQVLNSMAAFIALPSILQRILQDPVYGKG
KLGEIQGLILGMLDTFNYEQTLLETTTSLLNQDLHWSLCNLRASVTRGLNPKQDYCSICL
QQYKRRQEMADEIIVFSCGHLYHSFCLQSKECTIEIEGQTRWTCYKCSSSNKAGKLSENS
SEVKKGRITPSQVKMSPSCHPSKGDPAIKKATSEPVLDPQQIQAFDQLCHLYRGSSRLAL
LTELSQNRGSESCRPFGGSQSGPAFNSIFQKENFQLQLIPPPVTED
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgaaccagaccatgaaaatgtggaacaaagcctctgtgccaagactactgat
gaggaactgaacaagtctttcagtctagaagcttcactttcaaaattctcttacatagat
ctggacaaggaactggagttcagaaatgatctgattgatgataaggagttcgatattcct
caggttgatactcctccaacactggaaagcatactgaatgaaactgatgatgaagatgaa
tcttttgttcttgaagatcctacattgttaaacattgatactattgattctcactcttac
gatacttcatctgtggcaagctcagatagtggtgacaggaccaacttgaaaagaaagaag
aaattacctgattcgttttcactccatggatcagttatgcgacattcacttttgaaggga
atttctgcccagatagtgtctgcagctgacaaagtagatgctggcttgcctacagcaatt
gcagtatcaagtttgatagcagtgggtacatctcatggattggccttaatatttgatcag
aatcaagctttgcgactctgcttgggtagcactagtgttggaggtcagtatggagctatc
tctgccctcagtatcaacaatgactgctcaagacttctctgtggctttgctaagggacag
atcactatgtgggatttggccagtggaaagcttctaagatcaataacagatgctcatcct
ccgggaacagcaatattacatattaagtttacagatgatccaactcttgcaatttgcaac
gacagcggaggctctgtttttgaattgacatttaagagagtgatgggagtgagaacttgt
gaatctcgatgcctgttcagcggttccaagggtgaagtttgttgtattgaacctctccac
tctaagcctgagttgaaagatcatcccatcacacagttttccttattggctatggcatcc
ttaacaaagatactggtcattggattgaagccatccttgaaagtgtggatgacttttcct
tatggacggatggatccttccagtgttccattgctggcctggcacttcgtggcagtgcat
aattatgtgaatcccatgcttgccttctgcagaggagatgttgttcattttctcctggtt
aagagagacgaatctggagcgatacatgttactaagcaaaagcatcttcacctatactat
gacctcatcaactttacttggataaactcacgcacaattgtgctcttggacagtgtagag
aagttgcatgtgattgatcggcaaactcaggaggaactggaaacggtagagatctcagaa
gttcagttggtctataatagcagccatttcaaatcactagccactggaggaaatgtgagc
caggcgctggctttggttggagagaaggcttgctatcaatccataagtagctatggtggt
cagatcttttatttgggaacaaaatctgtttatgtgatgatgctgaggagctggagagag
agagtggatcacctcttgaaacaagactgtcttacagaagctttggctctggcatggtct
ttccacgaaggaaaagcaaaagcagtagtaggattatcaggggatgccaataagcgaaag
gctattgttgcagatcggatggtagaaatcctattgcattatgcagaccgagctctaaaa
aagtgcccagaccagggtaaaatccaagtgatggagcaacattttcaggatatggtacct
gtcatagttgattactgccttctgctacagcgaaaggatcttttatttagccaggtgtat
gacaaattaagtgagaattcagtggccaaaggagtgtttctggagtgccttgaaccgtat
attttaagtgataaattggtggggatcacaccccaggtaatgaaagacttgattgttcat
ttccaagataaaaagttaatggaaaatgtggaagccctcattgtacatatggatatcacc
agcctagatattcagcagatagttctcatgtgttgggaaaatcgactatatgatgctatg
atctatgtctacaacagaggcatgaatgaatttattagtccaatggagaaacttttcaga
gtcattgcacctcctttgaatgcaggaaagacgctaacagatgagcaagttgttatgggc
aacaagcttcttgtatatattagctgttgtctagcaggtcgtgcctatcccctgggtgac
atccctgaagatcttgttcccttggttaaaaaccaggtttttgaatttctaattcgcctg
cattcaacagaagctccccctgaagaagaaatctatccctatattcgtactttgctgcat
ttcgacacaagagaatttctaaatgtattggcgctgacttttgaagattttaaaaatgat
aagcaagctgtagaatatcaacaacgtattgtggatattttgttgaaggttatggtggag
aattcagattttacgccctcacaagtagggtgtctctttaccttccttgcccggcagctt
gcaaagcctgacaacaccttatttgtaaacagaaccctttttgatcaggtccttgaattc
ctttgtagtcctgacgatgactcccgacactctgaaagacagcaggtccttttagaattg
ctgcaggctggaggcatagttcaatttgaagagagtcgactcatccgtatggcagagaaa
gcagaattctaccaaatttgtgagtttatgtatgaacgagaacaccaatatgacaaaatt
attgattgctacatacgtgacccactaagagaggaagaagtctttaactacattcacaat
atcttatccattcctggatacagtgcagaggagaagcagtctgtatggcagaaagctatg
gatcatattgaggaacttgtggccctgaagccctgtaaagctgcagagctggttgctact
cacttttctgaacagatcgaaacagtccttaagaaacttcagaaccaggttttgcttttc
aagtttttgagaagccttcttgacccaagggaaggtattcatgtaaatcaagaatcgctg
cagatatctccctgtataatagagcagttcattgagctcttgtgtcagttcagcccaaac
cacgttatcgagacgctgcaagtccttgagtgctaccgcctagaagaaactattcagatt
acccagaagtatcaactttgtgaagtcactgcttatctattagaaaagaaaggagatatt
catggtgccttcttaataatgctaaagagactacaaagcaaacttcaagagataacacat
caagatgaaaataccaaagagaacccctcattgaaggatgttgaagagaccatggtagag
acgattgctctctgccagagaaattcacataatttgaaccaacagcagagagaggcactc
tggtttccgttattggaggcaatgatggcccctcagaagctgtctagttcagctgcacct
catccacactctgaagctctgaaatctttgaccatgcaagttctcaacagcatggcagca
tttattgcccttccatccatcttgcagcgaatcttacaggacccagtttatggaaaagga
aaacttggagaaatccagggccttattctgggaatgttggatacctttaactatgaacag
accctgctggaaacgacgactagccttctaaaccaagatctccattggtcattgtgtaac
ctgagagcttcagtcaccagaggactgaatcccaagcaggattactgctctatttgtttg
cagcagtacaagagacgccaagaaatggctgatgaaattattgtttttagctgtggccat
ttatatcattcattctgtctgcaaagcaaagagtgcaccatagaaattgaagggcaaaca
agatggacatgctacaaatgcagctcaagtaacaaagcaggaaagttgagtgaaaattca
tctgaagttaaaaagggaaggataaccccatcacaggtaaaaatgtccccatcctgtcat
ccatccaaaggggatcctgctattaaaaaggcaacctcagaacctgttctggatccacag
caaatccaagcatttgatcagctctgccatctctaccgaggaagttccaggctggccctc
ctcacagaactctcccagaatcgcggcagtgagagctgcaggccgtttggaggctcccag
agtggccccgccttcaacagcatcttccagaaggagaacttccagctgcagctcattcct
cccccggtgaccgaggactga
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integrated database retrieval system
