Odocoileus virginianus (white-tailed deer): 110123747
Help
Entry
110123747 CDS
T10722
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04140
Autophagy - animal
ovr04211
Longevity regulating pathway
ovr05010
Alzheimer disease
ovr05014
Amyotrophic lateral sclerosis
ovr05016
Huntington disease
ovr05017
Spinocerebellar ataxia
ovr05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110123747 (RB1CC1)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
110123747 (RB1CC1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
110123747 (RB1CC1)
05014 Amyotrophic lateral sclerosis
110123747 (RB1CC1)
05016 Huntington disease
110123747 (RB1CC1)
05017 Spinocerebellar ataxia
110123747 (RB1CC1)
05022 Pathways of neurodegeneration - multiple diseases
110123747 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ovr01009
]
110123747 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ovr04131
]
110123747 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
ovr03029
]
110123747 (RB1CC1)
Protein phosphatases and associated proteins [BR:
ovr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110123747 (RB1CC1)
Membrane trafficking [BR:
ovr04131
]
Autophagy
Autophagosome formation proteins
ULK complex
110123747 (RB1CC1)
Mitochondrial biogenesis [BR:
ovr03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
110123747 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
ZMYND8_CC
Motif
Other DBs
NCBI-GeneID:
110123747
NCBI-ProteinID:
XP_020727571
UniProt:
A0A6J0VQL1
LinkDB
All DBs
Position
15:complement(19114593..19155218)
Genome browser
AA seq
1589 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIHSKYKIAIQHQVLVVNGGECMAADRRVC
TYSAGTDTNPIFLFNKEMILSERLPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQ
SVEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRVDSLPEREGSEKAETKTSTEL
VLSSDTPAATSKPSLTSLHSSVEHVAPDTADAESGKDVREPCPSPAQQDAAAVEAKEGDL
PFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFMAECRQTIANLDNQNMKA
IKGLEDRLYALDQMIASCGRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLM
IMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLE
RVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKQLYEAEKSKRESFGKL
FRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPL
LCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASASQTSPQSASSPRLESATG
ITTTTSPRTPPPLAVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEHTLHQASLDL
DSLAESPESDFMSAVNEFVIEEQLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTS
APSQEDLGDHASLSVQLGRCRTSAHDSHLSIQTLKEDFCHFRTFVQKEQCDFANSLQCTA
VEIRSIIDKVKHSLEITLHEKHQKELESLKSEYEGRLATLVKESEENKSKITKLRGDLVC
LEEVLQNKDNEFALVKHEKEAVICLQKEKDQKLLEMERMVHTQHCEMEALRQSREVALED
LKKLHVENDEKLQLLRAELQRLEQSHLKELEDTLHGRHTQELEKAMSEHRLCLEKLEMEN
QQRIEQIQDSHAAVIQEKEQQLQELKLKVSDLSDTRCKLEVELALKEAETDEIKMLLEES
KAQEKKTLQSVFEKETEQLRAEISKLNQKIHDNNENYQVGLAELRTLMTVEKDQCISELI
SRHEEESDRLTTDLNKMTSLYQQAFEIEKGLKEELAELQSKLDLELSALEKQKDEKISQQ
EDMYKAIIQKLEKDKEEFVMRQERDRDQLVQRLNCEREAAIETARKEMHLEREAVEKDLL
EKVKHLESQLAKSHAMESAREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVR
TSLIAEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEE
KKRLEEEVSRLRGGAFVPSPGMAAAPELYGACAPEPPVEALDTLGEGRPDSAMETSTMSV
QENVHVLSEERQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQVGD
LVLIILDERHDNYVLFTVSPTLYFLHAESLPALDLRPGEGASGASRRPWVLGKVMEKEYC
QAKKAQNRFKVPLGTKFYRVKAVSWNKKV
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtatttctggtgaacactggaaccaccctgacatttgacactgaactt
acagtgcaaactgtggctgacctgaagcatgcaatccacagcaagtacaagattgccatt
cagcaccaagtgctggtggtcaacgggggcgagtgcatggctgccgaccgcagggtgtgc
acctacagcgccgggacggacacaaatccaatttttctttttaacaaggaaatgatcttg
tctgagcgtctacctgctattcctaaaactaccttttcaacagaaaatgacatggagata
aaagttgaagagtcccttatgatgcctgccgtttttcacactgttgcttcaaggacacag
cttgcagtggaaatgtatgaagttgccaagaaactctgctctttctgtgaaggtctggtc
catgatgaacatcttcagcaccaaggctgggctgcaatcatggccaatctggaagattgc
tcaaattcctaccaaaagctgcttttcaaatttgaaagtatttattcaaattatctgcaa
tccgtagaagacatcaaattaaaacttactcatttaggaactgcggtttcagtcatggcc
aagattccgctgttggagtgcctcaccagacacagttacagggaatgtctggggagagtg
gattccttgcctgaacgcgaaggctcagaaaaggctgagacaaagacctccactgaactg
gtgctctcttctgatacacctgcagcaacgagcaaaccctctttaacctcattgcactcg
tctgtggagcatgtagccccagacaccgcagatgctgaaagtggaaaagatgtgagggag
ccttgtccaagccctgcccagcaggacgcagcggcagtagaggctaaagagggggacctg
cctttctttaatgtttctctgttagactggatcaacgtgcaggacaggcctaatgacgtc
gagtccttggtcaggaagtgctttgattccatgagcaggcttgatccccggatcattcga
ccctttatggcagaatgccgtcagactattgccaatctcgataatcagaacatgaaagcc
atcaagggcctggaggacaggctgtacgccctggaccagatgattgccagctgtggccga
ctggtcaacgagcagaaagaactcgctcagggatttttagctaatcagatgagagccgaa
aacttgaaggatgcatctgtgctacctgatttgtgcctgagtcatgcaaatcagttgatg
attatgttgcaaaaccatagaaagctgttggacattaaacagaagtgcaccactgccaaa
caggagctcgcaaataaccttcatgtcagactcaagtggtgttgctttgtgatgctccac
gctgatcaggatggagagaagttgcaggctttgctccgcctggttatcgagctgttagag
agagtcaagatagtagaagctctgagcacagttcctcagatgtactgcttagctgttgtc
gaggttgtcaggagaaaaatgttcataaaacactacagggagtgggccggtgctttagtc
aaggacggaaagcaattatatgaggctgagaagtcaaaaagggaatcctttgggaaatta
tttaggaagtcttttctaagaaatcgtctgttcaggggattggactcctggcccccatcc
ttttgtacacagaagcctcgaaagtttgactgtgaacttccagatatttcattaaaagat
ttacagtttctgcaatcattttgtccttctgaagttcagccattcctcagggttccctta
ctttgtgactttgaacctctccaccagcatgtactcgctctgcataatttggtaaaggca
gcgcaaagtttggatgaaatgtcacagaccattacagacctgctgagtgaacaaaaggcc
tctgcgagtcagacgtccccgcagtcggcttcctcgccccggctggaaagcgcgacagga
atcacaaccactacctcacccaggacaccgcctccactcgccgtgcaggatcccctgtgt
cctgcggtctgccccttagaggagctgtcgccagacagcattgacgcccacacgttcgac
tttgagactatcccccatccaaatatagagcatactctccaccaggcctccttagacttg
gattcactagcagaaagtcctgagtcggactttatgtctgcagtgaacgagtttgtcata
gaggagcagctatcgtctccaaaccccatcagtgacccgcagagcccggagatgatggtg
gagtccctctactcctctgtcatcaacgccattgacagcagacggatgcaggacaccagt
gcccccagtcaggaggatctgggcgaccacgcgtccctcagcgtccagctggggaggtgc
cgcacgtctgcccacgactcgcacctcagcattcagaccctgaaggaggacttctgccac
ttccggacgttcgtgcagaaggaacagtgtgactttgccaattccttgcagtgtacagca
gtagaaataagaagcattatcgacaaagtaaagcactctttggaaataacactacatgaa
aaacatcaaaaagaactagagtctttaaaaagcgagtatgagggcaggcttgctactctg
gtgaaggagagtgaagagaacaagagcaagatcaccaagctgcggggggacctggtgtgc
ctagaggaggtgctgcagaataaggacaatgagttcgctctggtcaagcatgagaaggaa
gccgtcatctgcctgcagaaagagaaggaccagaagctgctcgagatggagcgcatggtg
cacacccagcactgtgagatggaagccctgcggcagtcgcgcgaggttgcactggaggac
ttgaagaagctccacgtggagaatgacgagaagctccagctactgcgggcagagctccag
cgcctggagcagagtcatctgaaggagctggaggacacactgcatggccgtcacacacag
gagttggagaaggccatgagcgagcacaggctctgcttggagaaactagaaatggaaaac
cagcagaggattgagcagatccaagattctcatgccgcagtcatccaggagaaggagcag
cagctccaagagttaaagctcaaggtttcggatttgtcggacacgagatgtaagttagag
gtggagctggctctgaaggaagcagaaactgacgagataaaaatgttgctggaagaaagc
aaagcccaggagaagaagaccttgcagtctgtcttcgaaaaagagaccgaacagctgaga
gcagagatcagtaaactaaaccaaaagattcacgacaataatgaaaattatcaggtgggc
ttggcagagctgagaactttaatgacagttgaaaaagatcagtgcatttccgagttaatt
agtagacatgaagaagaatctgataggcttacaactgatttgaacaaaatgacatcattg
tatcagcaagcatttgaaatagaaaaaggtctgaaagaagaattagctgaactgcagagt
aaattggacttagaattgagtgctcttgaaaaacaaaaagatgagaaaatctcccagcaa
gaggatatgtacaaagctattatccagaagctagagaaagacaaagaagaatttgtcatg
agacaggaacgggaccgagatcagctagttcagaggcttaattgtgaaagagaagctgct
attgagactgccagaaaagaaatgcacttggaaagagaagctgttgagaaagacttgtta
gagaaagttaaacatcttgagagtcaattagcaaaaagtcatgccatggaatctgccaga
gaagattcttcaagcctagttgctgaacttcaagaaaagctccaggaagaaaaagctaag
tttctagaacaacttgaagagcaggagaaaaggaagaatgaggagatgcagaatgttaga
acatctttgatcgctgagcagcagaccaattttaacaccgttttaacaagagagaaaatg
aggaaagaaaacataatcaatgatctcagtgataagctcaagagcacaatgcagcagcag
gagcgggacaaagatctgatcgagtccctgtctgaggaccgtgcgcgtctgctggaagag
aagaagcgactggaagaggaggttagccggctgcggggcggtgcctttgtgccctccccg
ggcatggccgcagccccagagttgtacggggcctgtgctcctgagcccccggtggaggcc
ctggacacccttggtgaggggaggccagactcagccatggagactagcacgatgtctgtc
caagaaaacgtccacgtgctctctgaagaaagacagcggataatgctgttggaacgaaca
ctacagttgaaagaagaagaaaacaagcggttaaatcagagactgatgtctcagagcatg
tcttccgtatcctcgaggcattctgagaagatagccattagagatttccaggtgggcgac
ctggtgctcatcatcctggacgagcgccacgacaactacgtgctcttcaccgtgagcccc
accctctacttcctgcacgcggagtccctgcccgccctggacctcaggccgggagagggc
gcttcaggtgcatctcgaagaccgtgggtccttggaaaagtgatggaaaaggagtactgc
caggccaaaaaggcacaaaacagatttaaagttcctttggggacaaagttttacagagtg
aaagctgtgtcctggaataagaaagtgtaa
DBGET
integrated database retrieval system
