Odocoileus virginianus (white-tailed deer): 110123769
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Entry
110123769 CDS
T10722
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03082
ATP-dependent chromatin remodeling
ovr04714
Thermogenesis
ovr05225
Hepatocellular carcinoma
Brite
Transcription machinery [BR:
ovr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110123769 (SMARCA2)
Chromosome and associated proteins [BR:
ovr03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
110123769 (SMARCA2)
Chromatin remodeling factors
BAF complex
110123769 (SMARCA2)
PBAF complex
110123769 (SMARCA2)
GBAF(ncBAF) complex
110123769 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
110123769
NCBI-ProteinID:
XP_020727598
UniProt:
A0A6J0VQX4
LinkDB
All DBs
Position
18:19194619..19368441
Genome browser
AA seq
1572 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPSM
GSADFPQEGMHQMHKPMDGIHDKGVEDIHCGSMKGTAMRPPHPGMGPPQSPMDQHSQGYM
SPHPSPLGAPEHVSSPISGGGPTPPQMTASQPGPLIPGDPQAMNQPSRGPSPFSPVQLHQ
LRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQPPPQPQPQPQPQQPQPQQQALVN
YNRPSGPGAELSGPSPPQKLPVPAPSGRPSPAPPAAAPPPAAAVPGPSVPQPAPGQPSPI
LQLQQKQSRISPVQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDLRTKATV
ELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKI
EQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERI
EKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKK
RRRKKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLD
AWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQETEEKILLDPNSEEVSEKDAKQII
ETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSL
YNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPS
VVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKN
HHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFA
MTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILY
RHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNG
VINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDG
TTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQD
RAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQ
AILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEED
ELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEME
EEVRLKKRKRRRNVDKDPAKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYK
DRCNVEKVPSNSQLEIEGNSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRN
HKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNE
EEEEEDEEESESEAKSVKVKIKLNKKDEKGRDKGKGKKRPNRGKAKPVVSDFDSDEEQDE
NEQSEASGTDDE
NT seq
4719 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcccacagaccctggcgcgatgccccacccggggccttcgccagggccggga
ccctctcctggacccattcttgggcccagtccaggacccggaccatcccccggttccgtc
cacagtatgatggggccaagtcctgggcctcctagcgtctcacaccctatgccgtctatg
gggtctgctgacttccctcaggaaggcatgcatcagatgcacaagcccatggatggtata
cacgacaagggagttgaagatatccattgtggatccatgaaaggcactgctatgcgacca
cctcacccaggaatgggccctcctcagagcccgatggatcagcacagccaaggttacatg
tcgccacacccatctccgctgggagcccccgagcatgtgtccagccctatatcaggaggc
ggcccgaccccaccacagatgacagcaagccagccaggacccctcatcccaggcgacccc
caggcgatgaaccaacccagcaggggtccctctccttttagtccagtccagctgcatcag
ctccgagcccagattttagcttacaagatgctggcccggggccagcccctccccgaaaca
ctgcagcttgcagtccaggggaaaaggacgttgcctggcatgcagcagcagccgccgcca
cagccccaaccccagcctcagccgcagcagccacagccgcagcagcaggcccttgttaac
tacaacagaccatctggcccgggggcagagctgagcggcccgagccccccgcagaagctg
ccggtgcccgcgcccagcggccggccctcgcccgcgccccccgctgcagcgccaccgccc
gcggctgccgtgcccggaccctccgtaccgcagccggccccggggcagccctcgcccatc
ctgcagctgcagcagaagcagagccggatcagcccggtccagaaaccccaaggcctggac
cccgtggagattctgcaggagcgggagtacagactccaggctcgcatagcccataggata
caggagctggaaaatctgcctggctctttgccaccagacttacgaaccaaagcaaccgtg
gaactgaaagcacttcggttactcaatttccaacgtcagctgcgacaggaggtggtggcc
tgcatgcgacgcgacacgacgctggagacggccctcaactccaaggcgtacaagcggagc
aagcgccagaccctgagagaagcccgcatgacggagaagctggagaagcagcagaagatc
gagcaggagcggaagcgaaggcagaagcaccaggaatacctgaacagtattttgcaacat
gcaaaagactttaaggagtatcatcggtctgtggctggcaagatccagaagctttccaaa
gcagtggccacctggcatgccaacacagaacgggagcagaagaaagagacggagcggatt
gagaaggagaggatgaggaggctgatggctgaagatgaagagggctatagaaaactgatc
gatcaaaagaaagacaggcgtttagcatacctcttgcagcagactgatgagtatgtggcc
aatctgactaacctggtttgggagcacaagcaagcccaggcggccaaagagaagaagaag
agaaggaggaagaagaagaaggctgaagagaacgctgaaggaggagagtctgccctggga
ccagatggagagcccatagatgagagcagccagatgagtgacctccccgtcaaagtgact
cacacagaaactggcaaggtcctgtttggcccagaagcacccaaagcaagtcagctggac
gcctggttggaaatgaatcctggttacgaagttgcccctagatcggacagtgaagagagt
gattctgattatgaggaggaggatgaggaggaagagtccagcaggcaggagactgaagag
aaaatacttctggatccaaacagtgaggaggtttcggagaaggacgccaagcagatcatt
gagacggcgaagcaagatgtggacgatgagtacagcatgcaatacagcgccagaggctcc
cagtcctactacacagtggcccacgccatctccgagagggtggagaagcagtcagccctc
ctcattaacggaaccctgaagcattatcagctccagggcctggaatggatggtttctctg
tataataacaatttgaacggaatcttagctgatgaaatggggctgggaaagaccatacag
accattgcactcatcacttatctgatggagcacaaacgactcaatggcccctatctcatc
attgttcccctttcgactctatctaactggacgtatgaatttgacaaatgggctccttct
gtggtgaaaatttcttacaagggcacccctgccatgcgtcgctctcttgtcccccagctg
cggagtggcaaattcaacgtcctcctgacgacttatgagtacattataaaagacaagcac
attcttgccaagatccggtggaaatacatgatagtggacgaaggccaccggatgaagaat
caccactgcaagctgactcaggtcctcaacacacactacgtggcccccagaaggatcctc
ctgaccgggaccccactgcagaacaagctcccggaactctgggccctcctcaacttcctc
ctccccaccatttttaagagctgcagcacattcgagcagtggtttaatgcaccctttgcc
atgactggagagagggtggacttaaatgaagaagaaactatattgatcatcaggcgtctg
cataaggtgttgagacccttcttactgaggagactgaagaaagaagttgaatctcagctt
ccagaaaaggttgagtatgtgatcaagtgtgacatgtcagctctgcagaagattctgtat
cgccacatgcaagccaaagggatcctcctcacagatggttcagagaaagataagaagggg
aaaggaggtgctaaaacattaatgaacactatcatgcaattgagaaagatctgcaatcac
ccatatatgtttcagcacattgaggaatcctttgctgaacacctgggctattcaaatggg
gtcatcaatggggctgagctgtatcgggcctcgggaaagtttgagctgcttgatcgtatt
ctgccaaaattgagagcgactaaccaccgcgtgctgcttttctgccagatgacgtccctc
atgaccatcatggaggattactttgcttttcggaacttcctttacctgcgccttgatggc
accaccaagtctgaagatcgtgctgctttgctaaagaaattcaacgaacctgggtcccag
tatttcattttcttgctgagtacaagagctggaggcctgggcttgaatctccaggccgct
gatactgtggtcatcttcgacagcgactggaatcctcatcaggacctgcaggcgcaggac
cgcgctcaccgaattggccagcaaaatgaggtccgcgtgctgagactctgcaccgtcaac
agcgtagaggagaagatcctcgccgccgccaagtacaagctgaatgtggatcagaaggtg
atccaggcgggcatgtttgatcagaagtcttccagccatgagcggagggccttcctgcag
gccatactggaacacgaagaggaaaatgaggaagaagatgaagtgcccgacgatgagact
ctgaaccaaatgattgctcgacgagaggaggaatttgatctttttatgcgcatggacatg
gaccggcgcagagaggatgcccggaacccgaaacgcaagccccgcctgatggaggaagac
gagctgccgtcgtggattattaaagacgacgcggaggtggaacggctgacgtgtgaagag
gaggaggagaagatcttcgggaggggctcccgccagcgccgggacgtggactacagcgac
gccctcacggagaagcagtggctgagggccattgaagacggcaatttggaagaaatggaa
gaggaagtccggcttaagaagcgaaaaagacgaagaaacgtggataaggaccctgcaaaa
gaagatgtggagaaggccaagaagaggagaggtcgccctccagctgagaagctgtcacca
aatccccctaaactgacgaagcagatgaatgctatcattgacactgtgatcaactacaaa
gacaggtgtaacgtggagaaggtgcccagtaattctcagttggaaatagaaggaaacagt
tcagggagacagctcagtgaggtcttcattcagttaccgtcaagaaaagaattgccagaa
tattatgaattaatcaggaaaccagtggatttcaaaaaaataaaggaaagaattcgtaat
cataagtaccggagcctgggtgacctggagaaagatgtcatgctcctctgtcacaatgct
cagacattcaacttggagggatcccagatctatgaagactccatcgtcttacagtcagta
tttaagagcgctcggcagaaaattgccaaagaggaagagagtgaggacgaaagcaatgaa
gaggaggaagaggaagatgaagaagagtcggagtcagaggcgaaatctgttaaggtgaaa
atcaagctcaataaaaaggatgagaaaggccgggacaaaggaaaaggcaagaaaaggcca
aatcgaggaaaagccaagcctgtggtgagcgattttgacagtgatgaagagcaggatgaa
aatgaacaatcagaagccagtgggactgatgatgagtga
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integrated database retrieval system
