Odocoileus virginianus (white-tailed deer): 110123793
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Entry
110123793 CDS
T10722
Symbol
NECTIN1
Name
(RefSeq) nectin-1
KO
K06081
poliovirus receptor-related protein 1
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03266
Virion - Herpesvirus
ovr04514
Cell adhesion molecule (CAM) interaction
ovr04517
IgSF CAM signaling
ovr04520
Adherens junction
ovr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
110123793 (NECTIN1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
110123793 (NECTIN1)
04517 IgSF CAM signaling
110123793 (NECTIN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
110123793 (NECTIN1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110123793 (NECTIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ovr04515
]
110123793 (NECTIN1)
04090 CD molecules [BR:
ovr04090
]
110123793 (NECTIN1)
Cell adhesion molecules [BR:
ovr04515
]
Immunoglobulin superfamily
Nectin family
110123793 (NECTIN1)
CD molecules [BR:
ovr04090
]
Proteins
110123793 (NECTIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
V-set
Ig_3
Ig_2
ig
I-set
TM_ErbB1
Ig_PVRIG
Motif
Other DBs
NCBI-GeneID:
110123793
NCBI-ProteinID:
XP_020727665
UniProt:
A0A6J0VU17
LinkDB
All DBs
Position
10:45806910..45879918
Genome browser
AA seq
515 aa
AA seq
DB search
MARMGLAGAAGRWWGLALGLTAFFLPGAYTQMVQVNDSMYGFIGTDVVLHCSFANPLPGV
KITQVTWQKATNGSKQNVAIYNPAMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELKDEG
VYICEFATFPAGNRESQLNLTVMAKPTNWIEGTHTVLRARKGQDDKVLVATCTSANGKPP
SVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHRQSLACIVNYHMDRFRESLT
LDVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTQNGSLPKGVEAQNRTL
FFRGPINYSLAGTYVCEATNPIGTRSGQVEVNITEFPYTPSPPEHGRRAGPVPTAIIGGV
VGSILLVLIVVGGIVVALRRRRHTFKGDYSTKKHVYGNGYSKAGIPQHHPPMAQNLQYPE
DSDDDKKAGPLGGSSYEEEEEEEGGGGERKVGGPHPKYDEDAKRPYFTVDEAEARQDGYG
DRTLGYQYDPEQLDLAENMVSQNDGSFISKKEWYV
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggctcggatggggcttgcgggcgccgctggacgctggtggggactcgctctcggcttg
accgccttcttcctcccaggagcctacacacagatggtccaggtgaacgactccatgtat
ggtttcatcggcacggacgtggtgcttcactgcagcttcgccaacccgctaccgggcgtg
aagatcacccaggtcacatggcaaaaggccaccaatggctccaagcagaacgtggccatc
tacaacccagccatgggcgtctcggtgctggccccctaccgcgagcgcgtggagttcctg
cggccctccttcacagacggtaccatccgcctctcccgcctggagctgaaggacgagggc
gtctacatctgcgagtttgccaccttccctgcgggcaaccgagagagccagctcaatctc
actgtgatggccaaacccaccaattggatagagggcacccacacagtgcttcgagccagg
aaggggcaggatgacaaggtcctggtggccacctgcacgtcagccaatgggaaacctccc
agtgtggtgtcctgggaaacgcggctgaagggcgaggcggagtaccaggagatccggaac
cccaacggcacggtgaccgtcatcagccgctaccgcctggtgcccagccgggaagcccac
cggcagtccctggcctgcatagtcaactatcacatggaccgcttccgggaaagcctcacc
ctcgacgtgcagtacgagcccgaggtgaccattgaggggtttgatggcaactggtacctg
cagcggatggatgtgaagctcacgtgcaaagccgatgccaaccccccagccactgagtac
cactggaccacgcagaatggctccctccccaaaggcgtggaggcccagaacagaactctc
ttcttcaggggacccatcaactacagcctggccggaacctatgtctgtgaggccaccaac
cccatcggcacccgctcaggccaggtggaggtcaatatcacagagttcccctacaccccg
tctcctcccgaacacgggcggcgcgccgggcccgtgcccacggccatcattgggggcgtg
gtgggcagcattctgctggtgctgattgtggtcggcgggatcgtggtggccctgcgccgg
cgccggcacaccttcaagggcgactacagcaccaagaagcacgtgtacggcaacggctac
agcaaggcgggcatcccccagcaccacccgcccatggcccagaacctgcagtacccggag
gactccgacgacgacaagaaagccggccccctgggcgggagcagctacgaggaggaagag
gaggaggagggcggagggggcgagcgcaaggtgggcggcccccaccccaagtatgacgag
gacgccaagcggccctacttcacggtggacgaggccgaggcccgtcaggacggctacggg
gaccggactctgggctaccagtacgaccctgagcagctggacttggccgagaacatggtc
tctcagaacgacgggtctttcatttccaagaaggagtggtacgtgtag
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