KEGG   Odocoileus virginianus (white-tailed deer): 110124230
Entry
110124230         CDS       T10722                                 
Symbol
ITGB1
Name
(RefSeq) integrin beta-1
  KO
K05719  integrin beta 1
Organism
ovr  Odocoileus virginianus (white-tailed deer)
Pathway
ovr03271  Virion - Rotavirus
ovr04015  Rap1 signaling pathway
ovr04145  Phagosome
ovr04151  PI3K-Akt signaling pathway
ovr04360  Axon guidance
ovr04510  Focal adhesion
ovr04512  ECM-receptor interaction
ovr04514  Cell adhesion molecule (CAM) interaction
ovr04517  IgSF CAM signaling
ovr04518  Integrin signaling
ovr04530  Tight junction
ovr04611  Platelet activation
ovr04670  Leukocyte transendothelial migration
ovr04810  Regulation of actin cytoskeleton
ovr04820  Cytoskeleton in muscle cells
ovr05100  Bacterial invasion of epithelial cells
ovr05133  Pertussis
ovr05135  Yersinia infection
ovr05140  Leishmaniasis
ovr05145  Toxoplasmosis
ovr05165  Human papillomavirus infection
ovr05200  Pathways in cancer
ovr05205  Proteoglycans in cancer
ovr05222  Small cell lung cancer
ovr05410  Hypertrophic cardiomyopathy
ovr05412  Arrhythmogenic right ventricular cardiomyopathy
ovr05414  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:ovr00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    110124230 (ITGB1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04015 Rap1 signaling pathway
    110124230 (ITGB1)
   04151 PI3K-Akt signaling pathway
    110124230 (ITGB1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    110124230 (ITGB1)
   04514 Cell adhesion molecule (CAM) interaction
    110124230 (ITGB1)
   04517 IgSF CAM signaling
    110124230 (ITGB1)
   04518 Integrin signaling
    110124230 (ITGB1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    110124230 (ITGB1)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    110124230 (ITGB1)
   04530 Tight junction
    110124230 (ITGB1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    110124230 (ITGB1)
   04810 Regulation of actin cytoskeleton
    110124230 (ITGB1)
 09150 Organismal Systems
  09151 Immune system
   04611 Platelet activation
    110124230 (ITGB1)
   04670 Leukocyte transendothelial migration
    110124230 (ITGB1)
  09158 Development and regeneration
   04360 Axon guidance
    110124230 (ITGB1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    110124230 (ITGB1)
   05205 Proteoglycans in cancer
    110124230 (ITGB1)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    110124230 (ITGB1)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    110124230 (ITGB1)
  09171 Infectious disease: bacterial
   05135 Yersinia infection
    110124230 (ITGB1)
   05133 Pertussis
    110124230 (ITGB1)
   05100 Bacterial invasion of epithelial cells
    110124230 (ITGB1)
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    110124230 (ITGB1)
   05140 Leishmaniasis
    110124230 (ITGB1)
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    110124230 (ITGB1)
   05412 Arrhythmogenic right ventricular cardiomyopathy
    110124230 (ITGB1)
   05414 Dilated cardiomyopathy
    110124230 (ITGB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ovr04131]
    110124230 (ITGB1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ovr04147]
    110124230 (ITGB1)
   04515 Cell adhesion molecules [BR:ovr04515]
    110124230 (ITGB1)
   04090 CD molecules [BR:ovr04090]
    110124230 (ITGB1)
Membrane trafficking [BR:ovr04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    110124230 (ITGB1)
Exosome [BR:ovr04147]
 Exosomal proteins
  Proteins found in most exosomes
   110124230 (ITGB1)
Cell adhesion molecules [BR:ovr04515]
 Integrins
  Integrin beta subunits
   110124230 (ITGB1)
CD molecules [BR:ovr04090]
 Proteins
  110124230 (ITGB1)
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt EGF_integrin PSI_integrin I-EGF_1 EGF_2 EGF_Teneurin vWA_SIBA-E
Other DBs
NCBI-GeneID: 110124230
NCBI-ProteinID: XP_020728360
UniProt: A0A6J0VW24
LinkDB
Position
9:17795222..17839244
AA seq 798 aa
MNLQLIFWIGLISSVCCVFGQADENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPT
SARCDDLEALKKKGCHPNDIENPRGSKDIKKNKNVTNRSKGTAEKLQPEDITQIQPQQLV
LQLRSGEPQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDF
RIGFGSFVEKTVMPYISTTPAKLRNPCTNEQNCTSPFSYKNVLSLTDKGEVFNELVGKQR
ISGNLDSPEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQ
CHLENDVYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL
SANSSNVIQLIIDAYNSLSSEVILENSKLPEGVTINYKSYCKNGVNGTGENGRKCSNISI
GDEVQFEISITANKCPNKNSETIKIKPLGFTEEVEIILQFICECECQGEGIPGSPKCHDG
NGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRK
RDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTTSCL
AVNGQICNGRGVCECGACKCTDPKFQGPTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDT
CAQECSHFNITKVENRDKLPQPGQVDPLSHCKEKDVDDCWFYFTYSVNGNNEATVHVVET
PECPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGEN
PIYKSAVTTVVNPKYEGK
NT seq 2397 nt   +upstreamnt  +downstreamnt
atgaatttacaactgattttctggatcggattgattagttcagtttgctgtgtgtttggc
caagcagatgaaaatagatgtttgaaagcaaatgccaaatcatgtggggagtgtatacaa
gcagggccaaattgtggatggtgcacaaattcaacatttttacaagaaggtatgcctaca
tctgctcgatgtgatgatttagaagccttaaaaaagaagggctgtcatccaaatgacatt
gaaaatcccagaggctccaaagatataaagaaaaataaaaatgtaacgaaccgaagcaaa
ggaacagcagagaagctgcagccagaagatatcactcaaatccagccacagcagttggtt
ctgcagttacgatcaggggagccacagacattcacactgaaattcaagcgggctgaagac
tatcccatcgatctctactacctcatggacctctcctactccatgaaagacgatttggag
aatgtgaaaagtctgggaacagatttgatgaatgaaatgaggaggatcacttcagacttc
cgaattgggtttggctctttcgtggagaaaactgtgatgccttacattagcacaacacca
gctaaactcaggaacccttgcacaaatgaacagaactgcacgagcccatttagctacaaa
aatgtgctcagccttactgataaaggggaagtatttaatgaacttgtcggcaagcagcgc
atatctggaaatttggattcaccagaaggtggctttgatgcaatcatgcaagttgcagtt
tgtggatcactcattggttggaggaatgtgacacggctgctggtgttttccacggatgct
gggtttcactttgctggagatgggaaacttggtggcattgttttaccaaatgatggacag
tgtcacctggaaaatgatgtgtacacaatgagccattattacgattatccttctattgct
caccttgtccagaaactaagcgaaaataacattcagacgatttttgcagttactgaagaa
tttcagcctgtttacaaggaactgaaaaatttgatccctaagtcagcagtaggaacatta
tctgcgaattccagcaatgtgattcagttgatcatcgatgcgtacaattccctttcttca
gaagtcattttggaaaacagcaaattaccggaaggagtaacaataaattacaagtcttac
tgcaagaacggggtgaatggaacaggggaaaatgggagaaaatgctctaatatttccatt
ggggatgaggttcaatttgaaattagcataactgcaaataaatgtccaaataagaactct
gaaaccattaaaattaagcctctgggcttcactgaggaagtggagattatccttcagttc
atctgtgaatgcgagtgccagggtgaaggcatcccaggaagccccaagtgccacgacggc
aacgggacctttgagtgtggggcctgcaggtgcaacgagggacgtgttgggagacactgt
gaatgtagcacagatgaggtgaacagtgaagacatggacgcttactgcaggaaagaaaac
agttcagaaatctgtagcaacaatggagagtgtgtctgtggacagtgtgtgtgtaggaag
agggacaatacaaatgaaatttattctggaaaattctgcgagtgtgacaatttcaactgt
gatagatccaatggcttaatatgtggagggaatggtgtttgcaagtgtcgagtgtgtgag
tgcaacccaaactacaccggtagtgcctgtgactgttctctggataccacttcctgcctg
gccgtaaatggacagatctgcaatggccgcggcgtctgcgagtgcggtgcctgtaagtgt
acagaccccaagttccaaggaccaacctgtgagatgtgtcagacctgccttggagtctgt
gctgagcataaagaatgtgttcagtgccgagccttcaataaaggagaaaagaaagacaca
tgtgctcaggaatgttcacatttcaacattaccaaggttgaaaatcgggacaaattgccc
cagccaggccaggtggatcccttgtcccactgtaaggagaaggacgttgacgactgctgg
ttctacttcacatattcagtgaatgggaacaatgaggccactgttcatgttgtagagact
ccagagtgccccactggtccagacattattccaattgtagcaggtgtggttgctggaatt
gttcttattggccttgcattgctgctgatttggaagcttttaatgatcattcatgacaga
agggaatttgccaaatttgaaaaggaaaaaatgaatgccaaatgggacacgggtgaaaat
cctatttacaagagtgctgtgacaactgttgttaatccgaagtacgaggggaaatga

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