Odocoileus virginianus (white-tailed deer): 110124517
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Entry
110124517 CDS
T10722
Symbol
ARID2
Name
(RefSeq) AT-rich interactive domain-containing protein 2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03082
ATP-dependent chromatin remodeling
ovr05225
Hepatocellular carcinoma
Brite
Transcription factors [BR:
ovr03000
]
Eukaryotic type
Helix-turn-helix
ARID
110124517 (ARID2)
Transcription machinery [BR:
ovr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110124517 (ARID2)
Chromosome and associated proteins [BR:
ovr03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
110124517 (ARID2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
110124517
NCBI-ProteinID:
XP_070310632
LinkDB
All DBs
Position
24:complement(31658476..31837260)
Genome browser
AA seq
1835 aa
AA seq
DB search
MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGF
AKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKP
QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWKEKTDRDFVKFWKDI
VDDNEVRDLISDRNKSHEGTSGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLE
VLYMLTEMGDVACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLVEHPSSSHQVLSE
IRPQAIEQVQTQTHVASAPASRAVVAQHVAPPPGIVEIDSEKFACQWLNAHFEVNPDCSV
SRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDSSNSGQAHIHVVGVK
RRAIPLPIQMYYQQQPVSTPVVRVDSVPDVSPSPSPAGIPHGPQTVGNHFQRTPVTNQSS
SLTATQMSFPVQGVHTVAQTVSRIPPNPSVHTHQQQNAPVTVIQNKAPIPCEVVKATVIQ
NSIPQTAVPVSIAVGGGAAQSSVVQNHSSGPQPVTVVNSQTLLHHPSVIPQQSPLHTVVP
GQIPSGTPVTVIQQAVPQSHIFGRVQNIPACTSTVSQGQQLITTSPQPVQTSSQQTSAGS
QPQDTVIIAPPQYVTTSTSNIVSATSVQNFQVATGQMVTIAGVPGPQPSRVGFQNIAPKP
LPSQQVSSTVVQQPIQQPQQPAQQSVVIVSQPAQQGQTYAPAIHQIVLANPAALPAGQAV
QLTGQPNITPSSSPSPVPAATNQVPTAMSSSSTPQPQGPPPTVSQMLSVKRQQQQQHSPA
PPQQVQVQVQQPQQVQMQVQPQQTNAGVGQPASGESSLIKQLLLPKRGPSTPGGKLILPA
PQIPPPNNARAPSPQVVYQVANNQAAGFGVQGQTPAQQLLVGQQNVQLVQSAMPPTGGVQ
TVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFATATVSQGNTTQLIAPAGI
TMSGTQAGVGLQVQTLPATQASPAGQSSCTTATPPFKGDKIICQKEEEAKEATGLHVHER
KIEVMENPSCRRGTTNTSNGDTKENEMQVGSLLNGRKYSDSSLPPSNSGKIQSEANQCSL
ISNGPSLELSENGASGKQNSEQMDVQDLKSDLRKPLVNGICDFDKGDGSHLSKNIPNHKT
SNHVGNGEISPMEPQGTLDATQQDTAKGDQLERTSNGPILTLGVSPSGSSIQEASNVATQ
QFSGTDLPNGPLASSVNSDVPQQRPSVVVSPHSAASVIQGHHVIAVPHSGSRVSHPPALL
SDVRSANGTAECKTVKRPAEDNDRETVTGIPNKVGVRIVTISDPNNAGCSATMVAVPAGA
DPSTVAKVAIESAAQQKQQHPPTYVQNVVPQSTPVTPSPAVQVQSQPNSSQPSALTAPTQ
HGEPVRKPGHNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRF
SFITHLQDKHCSKDALLAGLKQDEPGQAGSQKSSTKQPAVGGTGSTPRAQKAIVNHPSAA
LMALRRGSRNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSVL
AISNMEASSTLAKCLYELNFTVQSKEQEKDSEMLQ
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactcgacggggaaggcgcctccggacgagcggagaaagggactcgctttcctg
gacgagctgcggcagttccaccacagcagagggtcgccttttaaaaaaatccctgcggtg
ggtgggaaggagctggatcttcacggtctctacaccagagtcactactttaggcggattc
gcgaaggtttctgagaagaatcagtggggagaaattgtggaagagttcaactttcccaga
agttgttctaacgctgcctttgctttaaaacagtattacttgcgttacctagaaaagtac
gagaaagttcatcactttggggaggatgacgatgaggtgccaccgggcaaccccaaaccg
cagctccctattggtgcaatcccatcttcctacaactaccagcagcacagcgtgtcagat
tatctccgtcaaagttatgggctatctatggacttcaattcgccaaatgattataataaa
ctggtgctttcactattatctggactcccaaatgaagtggactttgctattaatgtatgc
actctcctgtcaaatgaaagcaaacatgtcatgcaacttgaaaaagaccctaaaatcatc
acattattacttgctaatgccggggtgtttgatgacactttaggatccttttctactgta
tttggagaagaatggaaggagaagactgatagagattttgttaagttttggaaagacatt
gttgatgataatgaagtacgtgacctcatatctgacagaaacaagtctcatgaaggtaca
tcaggagaatggatttgggaatctttatttcatccacctcgaaagctgggcattaatgat
attgaaggacaacgggtacttcagattgcagtgattttgcgaaatctttcctttgaggag
ggcaatgttaagctcttggcagctaatcgtacctgtctccgtttcctattactttctgca
catagtcattttatatctctaaggcagttaggccttgacacattaggaaatattgcagct
gagcttttattggatcctgttgatttcaaaactactcacctgatgtttcatactgttaca
aaatgcctaatgtcaagggatagatttttaaagatgaggggcatggaaattttgggaaat
ctttgcaaagcagaagataatggtgttttgatttgtgaatatgttgatcaggactcatac
agagagatcatttgtcatctcactttacctgatgtgctgctcgtaatctcaacacttgag
gtgctatatatgctcacagaaatgggagatgtagcttgcacaaaaattgcaaaagtagaa
aagagcatagacatgttagtgtgtctggtttctatggatattcagatgtttggcccagat
gcactggctgcagtaaaactcgtcgaacatccaagttccagtcatcaagttttatctgaa
attagaccacaagctatagagcaagtccaaacgcagacccatgtagcatctgccccagct
tccagagcagttgtagcgcagcatgttgctccacctccaggaatagtggaaatagatagt
gagaagtttgcttgtcagtggctaaatgctcattttgaagtaaatccagattgttctgtc
tctcgagcagaaatgtattctgagtacctatcaacttgcagtaaattggctcgtggtgga
atcctaacatcaactggattttataaatgtcttagaacagtctttccaaatcatacagtg
aagagagtggaggattccagtaacagtgggcaggcgcatattcatgtagtaggagtaaaa
cgtagggctatcccacttcccattcagatgtactatcagcagcaacctgtttctactccc
gttgttcgtgttgattctgtacctgatgtatctccaagtccttcacccgcaggaatccct
catggaccacaaactgtaggaaaccattttcagaggactcctgttaccaaccaatcttca
agtttgactgcaacacaaatgtcttttccagtacaaggtgttcatactgtggcacagact
gtttcaagaattccaccaaatccttcagttcatacccaccagcagcaaaatgctccggtg
actgtcattcaaaataaagctccaattccttgtgaagtcgttaaggctacagtaatccag
aactctataccccagacagcggttcctgttagtattgctgtgggaggaggagctgcacag
agttctgtggttcagaatcatagttcagggccacagcctgttacagttgtcaattcccag
acactgcttcaccatccgtcagtaattccacagcagtctccattacacacagtggtaccg
gggcagataccttctggcactcctgttacagtgattcagcaagctgtcccacagagtcat
atatttggcagagttcagaacataccagcatgtacttctacagtttcacagggtcaacag
ttaatcaccacgtcaccccaacctgtacaaacttcatctcagcagacatcagctggcagc
cagccacaggacactgttatcatagcacccccacagtatgtaacgacttctacatccaac
attgtctcagcaacttcagtgcagaattttcaggtagctacagggcagatggttaccatt
gctggtgttccaggtccacagccctcaagggtagggtttcagaacatcgcaccaaaacct
ctcccttctcagcaagtttcatcaacagtggtacaacagcctattcaacagccgcagcag
ccagcccaacaaagtgtagtgattgtaagccagccagctcaacaaggtcaaacttatgca
ccagccattcaccaaattgttcttgctaatccagcagctcttccagctggccaggcagtt
cagctaacgggacaaccaaacattactccatcttcctcaccatcacctgtcccagctgct
actaaccaggtccctactgccatgtcatcttcttccacccctcagccacagggaccacct
cctactgtcagtcagatgctgtctgtgaaaaggcagcaacagcagcagcattcaccagca
cctccacaacaggtacaagtacaagttcagcagccacaacaagtacagatgcaagttcag
ccacagcaaacgaatgcaggagttggtcagcctgcttctggtgagtcgagtctgataaaa
cagttgctgcttccaaagcgtggtccttcaactcccggtggtaagcttattctcccagcg
ccacagattcctccccccaataatgcaagagctcctagtcctcaggtggtgtaccaggtg
gccaataaccaagcagcaggttttggagtgcaagggcaaactccagctcagcagctattg
gttgggcagcaaaatgttcagttggtccaaagtgcaatgccacccaccgggggagtgcaa
accgtgcccatctcgaacttacaaatattgccaggtccactgatctcaaatagcccagca
accattttccaagggacttctggcaaccaggtaaccataacagttgtgccaaatacaagt
tttgcaactgcaactgtgagtcagggaaatacaactcagctcattgctccagcaggaatt
accatgagcgggacccaggcaggagttggacttcaggtgcaaacgcttccagccactcaa
gcatctccagctggacaatcatcttgtactactgctactcccccattcaaaggtgataaa
ataatttgccaaaaggaggaggaagcaaaagaagcaacaggtttacatgttcatgaacgt
aaaattgaagtcatggagaacccgtcctgcagacgaggaaccacaaacaccagcaatggg
gatacaaaggaaaatgaaatgcaggtgggaagtcttttaaatgggagaaaatacagtgac
tcaagtctacctccttcaaactcagggaaaattcaaagtgaggctaatcagtgctcactg
atcagtaatgggccatcattagaattgagcgagaatggagcgtctggaaaacagaactca
gagcaaatggacgtgcaggatcttaaaagtgatttgagaaagcctctagttaatggaatc
tgtgattttgataaaggagatggttctcatttaagcaaaaacattccaaatcacaaaact
tccaatcatgtaggaaatggtgagatatctccaatggaaccacaagggactttagatgcc
actcagcaagatactgccaaaggtgatcaactagaaagaacttctaatggacctatatta
actttgggtgtttcaccatctgggagcagtatacaggaggcctcaaatgtggcaacacag
cagtttagtggtactgatttgcctaatggacctctagcttcaagtgtgaattcagatgtg
cctcagcagcgcccaagtgtagttgtctcaccacattctgcagcctctgttatacagggg
catcacgtcatagccgttccccactcaggatcaagagtgtcccatcctcctgccctgctg
tctgacgtccggtctgcaaacggcacagcagaatgcaaaactgtaaagaggcccgcagag
gataatgatagggaaacagtcacaggaattccaaataaagtgggagttagaattgttaca
atcagtgaccccaacaatgctggctgcagtgcaacgatggttgcagtgccagcaggagca
gatccaagcactgtagctaaagtagcaatagaaagtgctgctcagcagaagcagcagcat
ccgccaacgtacgtacagaatgtggtcccgcagagcactccagtgacaccttcaccagct
gttcaagtccagagccagcctaacagctctcagccttctgcgctcactgcgcccactcag
catggagagccagtgaggaaacctgggcacaacttcatgtgtctgtggcagtcttgtaaa
aagtggtttcagaccccctcacaggttttctaccatgcagcaactgaacatggaggaaag
gacgtgtatccagggcagtgtctttgggaaggttgtgagccttttcaacggcagaggttc
tctttcatcactcacttacaggacaagcactgttcaaaggatgccctgcttgcaggatta
aaacaagatgaaccaggacaagcaggaagtcaaaaatcttctaccaagcagccagctgta
gggggcacaggctcaactcctcgagcacagaaggccattgtgaatcaccccagtgctgcc
ctcatggccctaaggagagggtcaagaaaccttgtctttcgagattttacagatgaaaaa
gagggaccaataactaaacacatccgactaacagctgccttaatattaaaaaacattggt
aaatattcagaatgtggtcgcagattgttaaagagacatgaaaacaacttatcagtgcta
gccattagtaacatggaagcttcctccacccttgccaaatgcctttatgaacttaatttt
acagttcagagtaaagaacaagaaaaagactcagaaatgctgcagtga
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