Odocoileus virginianus (white-tailed deer): 110124893
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Entry
110124893 CDS
T10722
Symbol
CSPG4
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
ovr Odocoileus virginianus (white-tailed deer)
Brite
Proteoglycans [BR:
ovr00535
]
Cell surface proteoglycans
Others
110124893 (CSPG4)
Lectins [BR:
ovr04091
]
C-Type lectins
Others
110124893 (CSPG4)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
110124893
NCBI-ProteinID:
XP_020729276
UniProt:
A0A6J0VVX0
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Position
16:complement(1521979..1557463)
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AA seq
2319 aa
AA seq
DB search
MCWGPRLPLPAPALALALTFAVLVGPASTASFFGENHLEVPVATALTDIDLQLEFSTAQP
EALLLLAAGPADYLLLQLYSGRLQVRLLLGQEEVRVQTPAETLLSDSVPHIVELTVSDSW
ALLSVDGLLNASAPVQRAPLEVPYGLFLGGTGSLDLPYLTRASRPLRGCLHTAILNGRSL
LRPLTADVPEGCAEEFSAGDDVAMGFSGPYSLAAFPAWGTRDEGTLELTLTTRSQKAPLA
FQAGGRQGDFVYVDIFEGHLRAVVEKGQGTVLLHNSVPVADGQPHEVSIHVDAHRLEISV
DQYPTRTSNRGVLSYLEPRGNLLLGGLDAEASRHLQEHRLGLAVNVSLLGCMEDLSVNGQ
RQGLREALLTRNMAAGCRLEEDEYEEDAYGPYEAFSTLAPEVWSAMELPEPCVPEPGLPP
VFANFTQLLTVSPLVVAEGGTAWLEWRHVQPTLDLNEAELRKSQVLFTVSRGARHGELEL
DIPGAQARKMFTLLDVVNRKARFIHDGSEDPSDQLVLEVSVTTRGAVPSCLRRGQTYILP
IQVNPVNDPPRIIFPHGSLMVILEHTQKPLGPEVFQAYDPDSVCEGLTFQLLGAPAGLPV
ERRDQPGEPATEFSCRELEAGSLVYIHRGGPAADLTFRVSDGLQASPPVTLKVVAVRPAI
QVLHNTGLRLAQGSAAPVSPANLSVQTNAVGQDVSVLFRVTGALRLGELQKQGAGGAEGT
EWRSTQAFHQRDVEQGRIRYLSTDPQHHAEDTVESVALEVQVGQEALSNLTFPVTVQRAT
VRLLRLEPLHTQNTQQEALTTAHLEAALEEAGPHPTAFLYEVVQAPRKGNLQLQGTRLSD
GQSFTQDDLRAGRVTYGATARDSEAVEDAFRFRVTAQPHFSPLYTFPIYIGGDPDAPVLT
NVLLSVPEGGEGVLSADHLFVKSLNSASYLYEVMERPRHGRLVWRDAQDKATIVTSFTNE
DLLHGRLVYQHDNSETTEDDIPFVATRQGEGSSDMAWEEVRGVFRVAIQPVNDHAPVQTI
SRVFHVARGGQRLLTTDDVAFSDADSGFADAQLVLTRKDLLFGSIVAVDEPSRPIYRFTQ
EDLRNRRVLFVHSGADRGWIQLQVSDGQHQATALLEVQASEPYLRVANGSGLVVPQGGQG
TIDTAVLPLDTNLDIRSGDEVHYQVTSGPRWGQLLRAGQPVTSFTQQDLLERAILYSHNG
SLSPRDTLTFSLEAGPVHTEATLQVTIAVEGPVAPLHLVRHKKIYVFQGEAAELRRDLLE
AAQEGVPPADIVFSVKTPPSAGYLVMLSHGAVAAEPPSLDPVHRFSQEAVDAGRVLYLHS
RPEVWSDTFSLDVSSGLGAPLEGVRVELEVLPAAIPLEAQNFSVPEGGARTLAPPLLRVT
GPYFPTLPALHLQLLEPPRHGALQREEGPQDGSLSAFSWREVEQQLIRYVHDGSETLADS
FVLVANASEMDRQSHPVVFTITILPVNDQPPILTTNTGLQMWEETTVPIPAEALRGTDSD
SGPEDLVYTLERPSNGRVVLSTAPSTEIHSFTQAQLDGGLVLFSHRGALDGGFRFSLSDG
EHSSAGHFFRVMAQKQLLLSLEGSRTLTVCPGSVQPLSSQSLRASSSAGTDPQHLLYRVL
GGPRFGRLFHTQQGSTGEALENFTQAEVYAGNVLYEHEMPSEPFWEAHDTLELQLSSPPA
PDMVATLAVTVTFEAACPQRPSRLWRNKGLWVSEGQRAEITTAALDAANLLASVPSPRRL
EHDVLFQITQFPTRGQLLVSEEPLHAGRPHFLQSELAAGQLVYAHGGGGTQQDGFRFRAH
LQGPAGAPVAGPQTSEVFAITVRDVNERPPQPQASVPLRLTRGSRSPVSRAQLSVVDPDS
APGEIEYEVQRAPHNGFLSLAGASPGPVTRFTQADVDAGRLAFVANGSSVVGVFQLSVSD
GASPPLLMSLAVDVLPSAIEVQLRAPLEVPQALGRSSLSRQQLRVVSDREEPDAAYRLTQ
GPRYGHLLVGGQPATAFSQLQVDQGDVVFAFTNFSSSHDQFSILALARGANASATVNVTV
RALLHVWTGGPWPQGATLLLDPTVLDAGELANRTGSVPRFRLLAGPRHGRVVRVPRARTE
PRGGQLVEQFTQQDLEDGRLGLEVGRPEGSSPGPTGDSLILELWARGVPPAVASLDFATE
PFNAARTYRVALLNLPEAARTEAREPESGTPTGGPSPATSSPVPPMASGGFLGFLEANMF
SVIIPICLVLLLLALIVPLLFYLRKRNKTGKHNVQVLTAKPRNGLASDAETFRKVEPGQA
IPLTAVPGQGPPPGGQPDPELLQFCRTANPALKNGQYWV
NT seq
6960 nt
NT seq
+upstream
nt +downstream
nt
atgtgctggggtccccggctcccgcttccagcccccgccctggccctggctctgaccttc
gctgtgttggtgggaccagcatccacagcctccttcttcggagagaaccacctggaggtg
cctgtggccacggctctgaccgacatagacctacagctggagttttccacggcccagccc
gaggccctgcttctcctggcggcaggccctgctgactacctactcctgcagctctactcc
ggacgcctgcaggtccgacttctcctgggccaggaggaggtgagagtgcagaccccggca
gagacgctgctgagcgactctgtcccccacatcgtggagctgaccgtgtcagacagctgg
gccttgctgtcggtcgacgggctcctgaatgcctcagccccagtccagagggcccccctg
gaggtcccctatgggctcttcctggggggcacagggagccttgacctgccctacctgacg
agagccagccgacccctgcggggttgcctccacacagccatcctcaatggccgcagcctc
ctccggccgctgacggcggatgtgcccgagggctgtgccgaggagttctctgctggtgac
gacgtggccatgggcttctctgggccctactcgctggccgccttccctgcctggggcact
cgggacgaaggcaccctggagcttacactcaccacacggagccagaaggcgcccctggcc
ttccaggccgggggccggcagggggacttcgtctacgtggacatatttgagggccacctg
cgggccgtggtggagaagggccagggcaccgtactgctccacaacagcgtgcctgtggcc
gatgggcagccccatgaggtcagcatccacgtggatgctcaccggctggaaatctccgtg
gaccagtaccccacacggacttccaaccgtggggtcctcagctacctggagccacgaggt
aatctcctccttggggggctggatgctgaggcctctcgccacctccaggagcaccgcctc
ggcctggctgtcaacgtctccctcctgggctgcatggaggatctcagtgtcaacggtcag
aggcaggggctccgggaagccttgctgacccgcaacatggcagccggctgcaggctggag
gaagatgagtacgaggaggatgcctacggcccatacgaagctttctccaccctggcgccc
gaggtgtggtcggccatggagctgcccgagccctgcgtgccagaaccggggctgcctccg
gtctttgccaatttcacccagctgctgaccgtcagcccgctggtggtggccgagggaggc
acagcctggctggagtggcggcacgtgcagcccacgctagacctgaacgaggccgagctg
cgcaagtcccaggtactgttcaccgtgagccgtggggcccgccacggcgagctggagctg
gacatcccgggcgcccaggcgcggaagatgttcaccctcctggacgtggtgaaccgcaag
gcccgcttcatccatgatggctccgaggacccctccgatcagctggtgctcgaggtgtca
gtgacgacccggggggccgtgccttcctgccttcgcaggggccaaacatacatcctgccc
attcaggtgaaccctgtcaatgacccacctcgcatcatcttcccacacggcagcctcatg
gtgatcctggaacacactcaaaagcccctggggccggaggtcttccaggcctacgaccca
gactctgtatgcgagggcctcaccttccagctcctcggagcccccgccggcctacccgtg
gagcgccgagaccagcctggggagccagcaaccgagttctcctgccgggagctggaggca
ggcagcctggtctacatccatcgcggtgggcccgccgcggacctgacattccgggtcagc
gatgggctgcaagccagtcccccagtcacgctgaaggtggtggccgtcaggccggccatt
caggtcctccacaacacggggctgcgcctggcccagggctccgctgcacctgtctcgccc
gccaacctgtcggtgcagaccaatgccgtggggcaggatgtgagcgtgctgttccgagtc
accggggccctgcggttgggagagctgcagaagcagggggcaggcggggcggagggcacc
gagtggcgatctacacaggccttccaccagcgggacgtggagcagggccgcatacggtac
ctgagcactgacccccagcaccacgccgaggacacggtggagagcgtggccctggaggtg
caggtgggccaggaggccctgagcaatctgaccttcccagtgacggtgcagagggccacg
gtgcggctgctgcggctggagccactgcacacccagaacacccagcaggaggccctcacc
acagcccacctggaggccgccctggaggaggcaggcccgcaccccaccgctttcctctat
gaggtggttcaggcccccaggaagggcaaccttcagctccagggcacgcggctgtcagac
ggccagagcttcacccaggatgacctgcgggccggccgggtgacttacggggccacagct
cgtgactcagaggcagttgaggatgccttccgtttccgcgtcacggcccagccacacttc
tccccgctgtacaccttccccatctacattggcggtgatccggatgcccccgtcctcacc
aacgtcctcctctcggtgcccgagggtggggagggcgtcctctctgctgaccacctcttc
gtcaagagtctcaacagcgccagctacctctacgaggtgatggagcgaccccgccatggc
aggttggtgtggcgggacgcacaggacaaggccaccatagtgacatccttcaccaacgag
gacctgctgcacggccggctggtctaccagcacgacaactcggagaccacggaagatgac
atcccctttgtggctacccgccagggcgagggcagcagtgacatggcctgggaggaggta
cggggtgtcttccgtgtggccatccagcccgtgaacgaccacgctcctgtgcagaccatc
agccgcgtcttccacgtggctcgcggcgggcagcggctgctgaccacagacgacgtggcc
ttcagcgacgccgactctggctttgcagatgctcagctggtgctgacccgcaaggacctc
ctcttcggcagtatcgtggctgtggacgagccctctcggcccatataccgctttacccag
gaggatctcaggaaccggcgggtcctgtttgtgcactcaggggctgaccgcggctggatc
cagctgcaggtgtccgacgggcagcaccaggccaccgcgctgctcgaagtgcaggcctct
gagccttacctccgtgtggccaatggctccggcctggtggtccctcaaggaggccagggc
accattgacacagccgtgctccccctggacaccaacctagatatccgcagtggagatgag
gtccactaccaggtcacatccggtccacgctgggggcagctgctccgggctggccagcca
gtcaccagcttcacccagcaggacctgctggagagagccattctctacagccacaacggc
agcctcagcccccgtgataccctcaccttttctttggaggcagggcctgtgcacacggaa
gccaccctgcaagtgaccattgccgtcgaggggccagtggcccccctgcacctggtccgg
cacaagaagatctatgtcttccagggagaggcagctgagctcagaagggacctactggag
gcagcccaggagggagtgccgccggcggacatcgtgttctcggtgaagaccccgccgagc
gccggctacctggtgatgctgtcccacggcgccgtggcagccgagccgcccagcctggac
cccgtgcaccgtttctcccaggaggcagtggatgcgggcagggtcctgtacctgcactcc
cgccctgaggtctggagcgacaccttctccctggatgtgtcctcaggcctgggtgctccc
ctcgagggcgtccgcgtggagctagaggtgctgcccgccgccatccccctggaggcacag
aacttcagtgtcccggagggcggtgcccgcaccctggccccgcccctgctccgcgtcact
gggccctacttccccacgctgccagccctccacctgcagctgctggagccgccgcggcat
ggggccctgcagagagaggaggggcctcaagacgggagcctcagcgccttttcctggaga
gaggtggaacagcagctgatccgctacgtgcatgatgggagcgagaccctggcagacagt
tttgtcctagtggctaacgcctcagagatggaccgccagagccaccccgtggtcttcacc
atcaccattctgcctgtcaacgaccagccccccatcctcaccacaaacacaggcctgcag
atgtgggaggagaccacggtgcccatcccagcggaggcccttaggggcacagacagcgac
tccggacccgaggacctggtctacaccctggagcggcccagcaacggacgggtagtgctg
agtacggcgccgagcaccgagatccacagcttcacccaggcccagctcgacggcggactc
gtgctgttctcacacagaggagccctggacggaggcttccgcttcagcctgtctgatggc
gagcacagctccgcgggacacttcttccgggtgatggcccagaagcagctgctcctctcc
ctggagggcagccggacgctgaccgtctgcccagggtccgtccagccgctcagcagccag
agcctgagagccagttccagtgcgggcactgacccccaacacttgctctaccgggtgttg
gggggcccccggtttggccggctcttccacacccagcagggcagcaccggggaggccctg
gagaacttcactcaggcagaggtatatgctgggaacgttctgtatgagcacgagatgccc
tccgagcccttctgggaggcccatgacaccctggagctccagctgtcctcaccccctgcc
cccgacatggtcgccacccttgccgtgaccgtgactttcgaggctgcctgtccccagcgc
cccagccgcctctggagaaacaaaggtctctgggtctccgaaggccagagggccgagatc
accactgcggccctcgacgccgccaaccttctggccagcgtcccatcgccccgacgcctg
gagcatgacgtgctcttccagatcacgcagttccccacgcggggccagctgttggtgtcc
gaggagcccctccatgccgggcggccccacttcctgcagtctgagctggccgcagggcag
ctggtgtacgcccacggtggcgggggcacccagcaggatggcttccgcttccgcgcccac
ctccaggggccggcgggggcccccgtggcgggaccgcagacctcagaggtcttcgccatc
acggtgcgcgatgtgaatgagaggccaccgcagcctcaggcctccgtcccgctccggctc
acccgaggctcccgcagccctgtctcccgggcccagctgagcgtggtggacccagactcc
gctcccggggagatcgagtatgaggtgcagcgggccccccacaacggcttcctgagccta
gcgggggccagcccggggccggtgacccgcttcacgcaggctgacgtggatgcaggacgc
ctggcgtttgtggctaatgggagcagcgtggtgggcgtgttccagctgagcgtgtccgac
ggggccagccccccgctgctcatgtccctggctgtggacgtcctgccctcagccattgag
gtgcagctgcgggcgcccctggaggtgccccaagctttagggcgctcttccctcagccgg
cagcagctccgcgtagtttccgatcgggaggagccagacgcagcctaccgcctcacccag
gggccccggtacgggcatctgctggtgggcgggcagcctgccacagccttcagccagctc
caggtagaccagggagacgtggtctttgccttcaccaacttctcctcctctcatgatcag
ttcagcatcctggcgctggccaggggtgccaacgcatctgccacggtgaacgtcaccgtg
agggctctgctgcacgtgtggacaggtgggccgtggccccagggtgccaccctgctcctg
gaccccactgtcttagatgcgggagagctggccaaccgcacgggcagtgtgccgcgtttc
cggctcttggcaggaccccggcacggccgcgtggttcgagtgccccgggccaggacagag
cctcggggaggccagcttgtggagcagttcacccagcaggaccttgaggatggccggctg
ggactggaggtaggcaggccagagggtagctctcccggccccacgggtgacagtctcatt
ctggagctgtgggcaaggggtgtccctcccgctgtggcctcgctggattttgccacggag
cctttcaacgcagcccggacctacagagtggccctgctcaatctgcctgaggctgctcgg
actgaagccagggagccagagagcggcacccccacgggcgggccaagcccagcgacctcc
agccccgtgccccccatggccagcgggggcttcctgggcttcctggaggccaacatgttc
agcgtcatcatccccatttgcctggtcctcctgctcctggccctcatcgtgcctctgctc
ttctacctccgcaaacgcaacaagacaggcaagcacaacgtccaggtgctgaccgccaag
ccccgaaacggcctggccagtgacgccgagaccttccgcaaggtggagccaggccaggcc
atcccactgacggcggtgcctggccaggggcccccgccggggggccagcctgaccccgag
ctgctgcagttctgccggacagccaaccctgccctcaagaacggccagtactgggtgtga
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