Odocoileus virginianus (white-tailed deer): 110125027
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Entry
110125027 CDS
T10722
Symbol
SHANK3
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
110125027 (SHANK3)
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GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_4
SAM_2
SH3_2
Ank_3
PDZ_6
SH3_9
Ank_5
PDZ
SH3_1
FERM_f0
Motif
Other DBs
NCBI-GeneID:
110125027
NCBI-ProteinID:
XP_070309717
UniProt:
A0ABM4H2C8
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All DBs
Position
23:16482508..16536569
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AA seq
1809 aa
AA seq
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MQLSRAAAAAAAAAAPAEPSEPLSPAPAPAPAPPGPLPRSAADGAPVGGRGGPGRGEEPR
GAQLLAASGPGPGAGMDGPGASAVIVRVGIPDLQQTKCLRLDPAAPVWAAKQRVLCALNH
SLQDALNYGLFQPPSRGRAGKFLDEERLLQEYPPNLDTPLPYLEFRYKRRVYAQNLIDDK
QFAKLHTKANLKKFMEYVQLHSTDKVARLLDKGLDPNFHDPDSGECPLSLAAQLDDATDL
LKVLKNGGAHLDFRTRDGLTAVHCATRQRNAAALTTLLDLGASPDYKDSRGLTPLYHSAL
GGGDALCCELLLHDHAQLGTTDENGWQEVHQACRFGHVQHLEHLLFYGADMGAQNASGNT
ALHICALYNQESCARVLLFRGANKDVRNYNSQTAFQVAIIAGNFELAEVIKTHKDSDVVP
FRETPSYAKRRRLAGPSALASPRPLQRSASDINLKGEVQPAASPGPSLRSLPHQLLLQRL
QEEKDRDRDGDQQNDGSPATGRGSRSKISPSGPGGPGGPGPAPGPGPAPPAPPAPPPRGP
KRKLYSAVPGRKFIAVKAHSPQGEGEIPLHRGEAVKVLSIGEGGFWEGTVKGRTGWFPAD
CVEEVQMRQYDTRHETREDRTKRLFRHYTVGSYDSLSAHSDYVIDDKVAVLQKRDHEGFG
FVLRGAKAETPIEEFTPTPAFPALQYLESVDVEGVAWRAGLRTGDFLIEVNGVNVVKVGH
KQVVALIRQGGNRLVMKVVSVTRKPEEDGARRRAPPPPKRAPSTTLTLRSKSMTAELEEL
ASIRRRKGEKLDEILAAAAEPALRPDIADADSRAATVKQRPTSRRITPAEISSLFERQGL
PGPEKLPGSLRKGIPRTKSVGEDEKLASLLEGRFPRSTSMQDTVREGRGIPPPPQTAPPP
PPAPYYFDSGPPPAFSPPPPPGRAYDTVRSSFKPGLEARLGAGAPGLYDSGAALGPLPYP
ERQKRARSMIILQDSAPEAADASRPPPAATPPERPKRRPRPPGPDSPYANLGAFSASLFA
PSKPQRRKSPLVKQLQVEDAQERAALAVGSPGPGVGSFAREPSPTHRGPRPSGLDYGPGD
GPGLAFGGPAPSKDRRLEERRRSTVFLSVGAIEGSPPTADMPSLQPSRSIDERLLGTGAT
TTGRDLLLPSPVSALKPLVSGPSLGPSGSTFIHPLTGKPLDPSSPLALALAARERALASQ
APSRSPTPVHSPDTDRPGPLFVDVQARDSERGPLASPAFSPRSPAWVPVPARREPEKVPR
EERKSPEDKKSMILSVLDTSLQRPAGLIVVHATSNGQEPSGLGAEEQRPGTPELAPAPTQ
SAVVTEPLPSPRAQPPGSAPADPGPGQGSSEEEPELVFAVNLPPAQLSSSDEETREELAR
IGLVPPPEEFANGVLLATPLPGPGPSPTTVPGPASGKPSTEPPPAPESAADSGVEEADTR
SSSDPHLETTSTISTVSSMSTLSSESGELTDTHTSFADGHTFLLEKPPVPPKPKLKSPLG
KGPVTFRDPLLKQSSDSELMAQQHHAATAGLASAAGPARPRYLFQRRSKLWGDPVESRGL
PGPEDDKPTVITELSSRLQQLNKDTRSLGEEPAGGLGGLLDPAKKSPIAAARLFSSLGEL
STISAQQRSPGGPGGGPSYPVRPGGRYPVARRAPSPVKPASLERVEGLGAGAGGAGRPFG
LTPPTILKSSSLSIPHEPKEVRFVVRSVSARSRSPSPSPLPSPAPGPGPGAPSPRRPFQQ
KPLQLWSKFDVGDWLESIHLGEHRDRFEDHEIEGAHLPALTKDDFVELGVTRVGHRMNIE
RALRQLDGS
NT seq
5430 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgagccgcgccgccgccgccgccgccgccgccgccgcccctgcggagccctcg
gagccgctgtccccggcgccggccccggccccggctccccccggccccctcccgcgcagc
gcggccgacggggctccggtggggggccggggggggccggggcgcggcgaggagccccgg
ggcgcccagctcctggccgctagcggccccggcccgggcgcggggatggacggccccggg
gccagcgccgtgatcgtgcgcgtcggcatcccagacctgcagcagacgaagtgcctgcgc
ctggacccggccgcgcccgtttgggccgccaagcagcgcgtgctctgcgccctcaaccac
agcctccaggacgcgctcaactacgggctcttccagccgccctctcggggccgcgccggc
aagttcctggacgaggagaggcttctgcaggaatacccgcccaacctagacacgcccctg
ccctacctggagtttcgatacaagagacgagtttatgcccagaacctcattgatgataag
cagtttgcaaagcttcacacaaaggcaaacctgaagaagtttatggaatacgtccagctg
cacagcacagacaaggtggcccgcctgctggacaaggggctggaccccaacttccacgat
cctgactcaggagagtgcccgctgagccttgccgcccagttggacgatgccactgacctg
ctgaaggtgctgaagaatggcggtgctcacctggacttccgcacacgagacgggctcacg
gccgtgcactgtgccacgcggcagcggaatgcggctgccttgacgaccctgctggacctg
ggcgcctcaccggactacaaggacagccgcggcctgacgcccttgtaccacagcgccctg
ggcgggggggacgccctctgctgcgagctgctcctgcacgaccatgctcagctggggacc
accgacgagaatggctggcaggaagtccaccaggcctgccgcttcgggcacgtgcagcac
ttggagcacctgctgttctacggagctgacatgggggctcagaacgcctctgggaacaca
gccctgcacatctgtgccctctacaaccaggagagctgtgcccgtgtcctgcttttccgc
ggagccaacaaggatgtccgcaattacaacagccagacagccttccaggtggccatcata
gcggggaactttgagctcgcggaggtcatcaagacccacaaagattcggacgtcgtgcca
ttcagggaaacccccagctacgcgaagcggcggcggctggccggcccgagcgccctggcc
tcacctcggcccctgcagcgctcagccagtgacatcaacctgaagggcgaggtgcagccg
gcagcttctcctggaccttcactgcgaagcctcccccaccagctgctgctccagcgactg
caggaggagaaagaccgggaccgggatggggaccagcagaatgatggcagccctgccaca
ggcaggggcagccggagcaagatcagcccgagcgggcccggcggcccgggcggccccggc
cccgcgcccggccccggcccggcgccccccgcgccccccgcgccgccgccccggggcccg
aagcggaaactttacagcgcagtccccggccgcaagttcatcgccgtgaaggcgcacagc
ccgcagggcgagggcgagatcccgctgcaccgcggcgaggccgtgaaggtgctcagcatt
ggggagggcggtttttgggaggggaccgtgaaaggccgcacgggctggttcccggctgac
tgcgtggaggaggtgcagatgagacagtatgacacccggcacgaaacccgggaggaccgg
acaaagcgacttttccgccactacacggtgggctcctacgacagcctctctgcacacagt
gactatgtcattgacgacaaggtggctgtcctgcagaaacgggaccatgaaggctttggt
tttgtgctccggggggccaaagcagagactcccatcgaggagttcacgcccacgccggcc
ttccctgcgctccaatacctcgagtcggtggatgtggagggcgtggcctggagggcaggg
ctgcgcacgggagacttcctcatcgaggtgaatggcgtgaatgtggtgaaagtcggacac
aagcaggtggtggctctgatccgccagggcgggaaccgcctcgtcatgaaggtggtgtca
gtgacaaggaagccggaagaggacggggctcgacgcagagccccgccgccccctaagaga
gcccccagcacaacgctgaccctgcgctccaagtccatgacagcagagcttgaggagctt
gcctccattcggagaaggaaaggggagaagctggacgagatcctggcggccgccgcggaa
ccggcactgaggccggacatcgcggatgcggactcgagagcggccaccgtcaaacagcgg
cccaccagtcggaggatcacccctgctgagatcagttcactgtttgagcgccagggcctc
ccaggcccggagaagctgccaggctccctgcggaaggggattccacggaccaagtctgta
ggggaggacgagaagctggcgtccctgctggaggggcgcttcccgaggagcacgtcgatg
caggacacggtgcgcgagggccgtggcatcccgccccctccgcagaccgcgccgccgccc
cctcccgccccctactacttcgactctgggccgccccccgccttctcgccaccgccgcct
ccgggccgcgcctacgacaccgtgcgttccagcttcaaacccggcctggaggcacgcctg
ggcgcgggcgccccgggcctgtatgattcaggcgcggccctgggtccgctgccttacccg
gagcggcagaagcgcgcgcgctccatgattatcctgcaggactcggcgcccgaggcggct
gacgcctctcggcccccgccagcggccaccccgccggaacgccccaagcggcggccgcgg
ccgccgggccccgacagcccctacgccaacctgggcgccttcagcgccagcctcttcgcg
ccgtcgaaacctcagcgccgcaagagcccgctggtgaagcagctgcaggtggaggatgcg
caggagcgcgcggccctggccgtgggcagccccggcccgggcgtcggcagcttcgccagg
gagccctccccgacgcaccgcgggccgcggcccagcggcctcgactacggccccggagat
ggccccgggctggcgtttggcggcccggccccaagcaaggaccggcggctggaggagcgg
cggcgctccaccgtgttcctgtctgtgggtgccatcgagggcagccctccgaccgcggac
atgccctccctgcagccctcccgctccatcgatgagcgccttctgggaaccggcgccacc
accaccggtcgtgacctgctgctgccctccccagtttctgctctgaagccattggttagc
ggcccgagccttgggccttccggctccactttcatccacccgctcaccggcaaacccctg
gaccccagctcgcctttggccctggccctggcggctcgcgagcgggctctggcctcccag
gcgccctcccggtcccctacacctgtgcacagccccgacaccgaccggcccgggcccttg
tttgtggatgtgcaggcccgggactcggagcgagggcctctggcctcgccagccttctcc
cccaggagcccagcctgggttcctgtgcctgcgcggagggagcccgagaaggtgccccgg
gaggagcgcaagtccccggaggacaagaaatccatgatcctcagcgtcctggacacgtcc
ctgcagcggcccgctggcctcatcgtcgtgcacgccaccagcaatgggcaggagcccagt
gggctgggggccgaagagcagcgccctggcaccccggagctggccccggcccccacgcag
tccgctgtggtcacagagcccctgccgagcccccgggcccagccccccggcagtgccccc
gctgaccccgggcccggccagggcagctccgaggaggagccggagctggtattcgctgtg
aacctgccgccagcccagctgtcctccagtgacgaggagaccagagaggagctggcccgc
atcggactcgtgccgcctcccgaagagtttgccaacggggtcctgctggccacgccactc
cccggcccaggcccttcgcccaccacggtgccaggcccggcctcagggaagccgagcact
gagccgccgcccgccccggagtccgcggcggattcgggggtagaggaggccgacacgcgc
agctccagcgacccccacctggagaccacgagcaccatctccaccgtgtccagcatgtcc
accctgagctcagagagcggggagctcacggacacccacacctccttcgctgacggacat
acttttctactcgagaagccaccagtgcctcccaagcccaagctcaagtccccgctgggg
aaggggccggtgaccttcagggacccgctgctgaagcagtcctccgacagtgagctcatg
gctcagcagcaccacgccgccaccgccgggctggcctccgctgccgggcccgctcgccct
cgctacctcttccagagaaggtccaagctgtggggggaccccgtcgagagccgggggctc
cctgggcccgaagacgacaagccaactgtgatcactgagctcagctcgcgcctgcagcag
ctgaacaaagacacccgctccctgggggaggagccagccggcggcctgggcggcctgctg
gaccccgccaagaagtctcccatcgcggcagctcggctcttcagcagcctcggtgagctg
agcaccatctcagcgcagcagcgcagccccgggggcccgggcggcgggccctcctacccc
gtgcggccaggcggccgctaccctgtggcgcggcgtgccccgagcccggtgaagcccgcg
tcgctggagcgggtggaggggctgggggcgggggcggggggcgcggggcggcccttcggc
ctcacgccccccaccatcctcaagtcgtccagcctctccatcccccacgagccgaaggag
gtgcgctttgtggtgcgcagcgtgagcgcgcgcagccgctcgccctcgccttcgccgctg
ccctcgccagcgcccggcccgggccctggggcccccagcccccgccggcccttccagcaa
aagcccctgcaactctggagcaagttcgacgtgggcgactggctggagagcatccacttg
ggcgagcatcgcgaccgcttcgaggaccacgagatcgagggcgcgcacctaccggcgctc
accaaggacgacttcgtggagctgggcgtcacgcgcgtgggccaccgcatgaacatcgag
cgcgcgctcaggcagctggacggcagctga
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