Odocoileus virginianus (white-tailed deer): 110125350
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Entry
110125350 CDS
T10722
Symbol
RORC
Name
(RefSeq) nuclear receptor ROR-gamma isoform X2
KO
K08534
RAR-related orphan receptor gamma
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04659
Th17 cell differentiation
ovr04710
Circadian rhythm
ovr05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
110125350 (RORC)
09159 Environmental adaptation
04710 Circadian rhythm
110125350 (RORC)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
110125350 (RORC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ovr03000
]
110125350 (RORC)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ovr03310
]
110125350 (RORC)
Transcription factors [BR:
ovr03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
110125350 (RORC)
Nuclear receptors [BR:
ovr03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
110125350 (RORC)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DDE_Tnp_1_7
Motif
Other DBs
NCBI-GeneID:
110125350
NCBI-ProteinID:
XP_020729993
UniProt:
A0A6J0VXF7
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Position
5:complement(8665491..8690355)
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AA seq
525 aa
AA seq
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MDRAPQRHHRASQGKGPCSLTELLAAKKTHTSQIEVIPCKICGDKSSGIHYGVITCEGCK
GFFRRSQQCNVAYSCTRQQNCPIDRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRD
SLHAEVQKQLQQRQQQREQAAKTPPRGAQGADPLTCTLGLPDGQLPLGSSPDLPEASACP
PSLLRAPGCGPSYSNSLAKAGLNGASYHLEYSPERGKAEGRENFYGTGSQLAPDRCGLHF
EDPRRPGLGEPGRGLDSYFTPSFRSTPEVPYASLTEIEHLVQNVCKSYRETCQLRVEDLL
RQRSNVFSREEVAGYQRKSMWEMWGRCAHRLTEAIQYVVEFAKRLPGFMELCQNDQIVLL
KAGAMEVVLVRMCRAYNADNDTVFFEGKYGGVELFRALGCSELISSIFDFARSLSALRFS
EDEIALYTALVLINANRPGLQEKRKVEQLQCNLELAFHHHLCKTHRQGILAKLPPKGKLR
SLCSQHVEKLQTFQHLHPIVVQAAFPPLYKELFSTEIESPEGLSK
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggacagggccccacagagacaccaccgagcctcgcagggtaaggggccctgcagcctt
acagagctgctggctgcaaagaagacccacacctcacaaattgaagtgattccttgcaaa
atctgtggggataagtcatcagggatccactacggggttatcacctgcgaggggtgcaag
ggcttcttccgccggagccagcagtgcaacgtggcctactcctgcacccgtcagcagaac
tgccccattgaccgcacgagccgcaaccgatgccagcactgccgcctgcagaaatgcctg
gccctgggcatgtcccgagatgctgtcaagtttggccgcatgtccaagaagcaaagggac
agcctgcatgcagaggtgcagaaacagctgcagcagcggcaacagcagagagagcaagca
gccaagacccctcccaggggagcccaaggagcagaccccctcacctgcaccttggggctc
ccggatgggcagctacccctgggctcctcgcctgacctaccagaggcgtcagcctgtccc
cccagtctcctgagagctccgggctgcgggccctcctactctaacagcctggccaaggcc
gggctcaacggggcctcatatcacctggaatacagccctgagcggggcaaggctgagggc
agagagaacttctatggcacaggcagccaattggccccggacaggtgtggacttcacttt
gaggaccccaggcgtcctgggcttggggagccaggacggggcctggacagctacttcacc
cccagtttccgcagcaccccagaggtgccttatgcttccctgacggagattgagcacctg
gtgcagaatgtttgcaagtcctaccgggagacgtgtcagctgcgggtggaggacctgctt
cgtcagcgctccaatgtcttctcgcgagaggaggtggctggctaccagaggaagtcgatg
tgggagatgtggggacgctgtgcccaccgactcaccgaggccattcagtatgtggtggag
ttcgctaagaggctcccgggctttatggagctctgccagaacgaccagatcgtgctactc
aaagcaggagccatggaagtggtgctggtcaggatgtgccgggcctacaacgctgacaat
gacacagtcttttttgaaggcaaatacggtggcgtggagctgttccgagccttgggctgc
agtgaactcatcagctccatctttgacttcgcccgctccctgagtgccttgcgcttttca
gaggacgaaatcgccctctacacagccctcgtcctcatcaatgccaaccggccagggctc
caagagaagaggaaagtagaacagctgcagtgcaatctggagctggcctttcatcatcat
ctctgcaagactcatcgccaaggcatcctggcaaagctgccacccaaggggaagctgcgg
agcctgtgtagccagcatgtggaaaagctgcaaaccttccagcatctccaccctatcgtg
gtccaagctgctttccctccactctacaaggaactcttcagcactgaaatcgagtcacct
gagggactgtccaagtga
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