Odocoileus virginianus (white-tailed deer): 110125395
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Entry
110125395 CDS
T10722
Symbol
TNC
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04151
PI3K-Akt signaling pathway
ovr04510
Focal adhesion
ovr04512
ECM-receptor interaction
ovr04518
Integrin signaling
ovr05165
Human papillomavirus infection
ovr05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
110125395 (TNC)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110125395 (TNC)
04518 Integrin signaling
110125395 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110125395 (TNC)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
110125395 (TNC)
09172 Infectious disease: viral
05165 Human papillomavirus infection
110125395 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ovr00536
]
110125395 (TNC)
Glycosaminoglycan binding proteins [BR:
ovr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110125395 (TNC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
EGF_TEN
EGF_Teneurin
Fibrinogen_C
EGF_2
EGF_Tenascin
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_2nd
Pur_ac_phosph_N
Fn3_PBP1
Fn3_VIN3
DUF7949
Fn3_ROS1
DUF4998
Fn3_Dep-1_1st
EGF_PEAR1L
fn3_2
NDNF
EGF
hEGF
YPEB_PepSY1-2
Motif
Other DBs
NCBI-GeneID:
110125395
NCBI-ProteinID:
XP_070315312
UniProt:
A0ABM4HIB6
LinkDB
All DBs
Position
31:8135252..8236729
Genome browser
AA seq
2292 aa
AA seq
DB search
MGVMTRLLAGLFLALLALPAEGGVLKKVIRHKRQSGMNVTLPEENQPVVFNHVYNIKLPV
GSQCSVDLESASGEKDLAPPSEPRESFQEHTVDGENQIVFTHRINIPRRACGCAAAPDVK
ELLSRLEELENLVSSLREQCTSGAGCCLQSAEGRVDTRPFCSGRGNFSTEGCGCVCEPGW
KGPNCSEPECPSNCHLRGQCLDGQCVCDEGFTGEDCGQLACPSDCNDQGKCVDGACVCFE
GYSGLDCSRETCPVPCSEEHGRCVDGRCVCQEGFAGEDCREPLCLHNCHGRGRCVENECV
CDEGFTGDDCGELVCPNDCFDRGRCLNGTCSCDEGFTGEDCGQLACPHSCHGRGRCDEGQ
CVCDEGFAGPDCSERRCPSDCHERGRCVDGRCECNDGFTGADCGELRCPRDCSGHGRCVN
GQCVCDEGHTGEDCGQRRCPGDCHGRGRCVDGRCECQPGFQGDDCSEMSCPHDCHQHGRC
VNGMCVCDDAYTGEDCRELRCPRDCSQRGRCVDGRCVCEDGFAGPDCADLACPGDCHGRG
RCVDGQCVCLEGFTGPDCAQRRCPGDCHGQGRCVDGQCVCHEGFTGPDCAQRSCPNDCSN
WGQCVSGRCICNEGYTGEDCSQVSPPKDLIVTEVTEETVNLAWDNEMRVTEYLIVYTPTH
EDGLEMQFRVPGDQTSATIRELEPGVEYFIRVFAILENKKSIPVSARVATYLPTPEGLKF
KSIKETSVEVEWDPLDIAFEAWEVIFRNTNKDDEEEITKSLRRPETTYRQTGLAPGQEYE
ISLHIVKNNTRGPGLKRVTTTRLDAPSQIEVKDVTDTTALITWSKPLAEIDSIELTYGIK
DVPGDRTSIDLTHEENQYSIGNLKPDTEYEVALISHRADMASNPAKETFTTGLDAPRNLR
RISQTDNSITLEWRNVKAAADSYRIKYAPISGGDHAEVEVPRSQQTTTRTTLTGLRPGTE
YGIGVSAVKGDKESDPATINAATELDTPKDLRVSEPTETSLTLLWRTPVAKFDRYRLNYS
LPSGQPVEVQLPRDTTSHVLRGLEPGREYTVLLTAEKGRHKSKPARVQASTDHTPELENL
TVTEAGWDGLRLNWTAADQAYEHFVIQVQEADGVEAARNLTVPGSLRAVDVPGLKAATPY
RVTIHGVIRGYRTPVLSAEASTGDTPHLGEVTVSEVGWEALRLNWTAPEGVYEQFLIQVQ
EPGTEEAARNLTVPGGLRSVDLPGLKAATPYSITIRGVTRDFSTAPLSVEVLTEEAPGLG
NLTVAEVSWDALRLHWTSPDGIYEQFVVKIRETDQPREVHSLTVPGSQHTVEIPGLKAGT
SYTITLLGKVRDRSTQPLAVEVITAELPQLGDLVVTEAGWDGLRLNWTAADQAFEHFVIQ
VQEANGVEAAQNLTVPGSLRAADVPGLKAATPYRVTIHGVIRGYRTPVLSAEASTAGEPE
LGNLSVSDITSESFNLSWTATDGAFETFTVEIIDSNRFLETMEYNVSGAERTAHISGLRP
SNDFIVYLSGLAPSMQTKTISATATTVAEPLLSHLTVSNVTSGSVAISWKAQESAFDSFL
VEVRNSDPLQEMVVHSLPAASRSFVITNLKASSDYTAHLHGLIGRQHAQTLMAQATTEAL
PLLENLTISDINPYGFTVSWMASENAFDSFLVTVVDSGKLLDPQEFTLSGTQRKLELRGL
ITGIGYEVMVSGFTQGHQTKPLRAEIITEAEPEVDNLLVSDATPDGFRLSWTADEGVFDS
FVLKIRDTKKQSEPLEITLLAPERTRDITGLREATEYEIELYGISSGRRSQPVTAIATTA
MGSPKEIIFSDITETSATVSWMAPTTQVESFRITYVPIAGGSPSAVTVDGTKTQTRLLRL
LPGADYLVSVIALKGFEESEPVSGTLTTALDGPSSLVTANITDSEALAMWQPAIAPVDNY
VISYTGERVPEITRTVSGNTVEYALTNLEPATEYTLRIFAEKGPQKSSTITTKFTTDLDS
PRDFTATEVQSETALLTWRPPRASVTGYLLVYESVDGTIKEVVVDPDTTSYSLTDLSPST
HYTARIQALNGTLRSKTVKTIFTTTGVLYRFPRDCSQAMLNGDTTSGVYTIYLNNNKTQK
QEVFCDMTSDGGGWIVFLRRKNGREDFYRNWKAYTAGFGDLREEFWLGLDTLSKITAQGQ
YELRVDLRDHGQSAYAVYDKFSVGDSRTRYRLKVEGYSGTAGDSMAYHNGRSFSTFDKDT
DSAITNCALSYKGAFWYKNCHRVNLMGRYGDNSHSQGVNWFHWKGHEHSIQFAEMKLRPS
NFRNLEGRRKRA
NT seq
6879 nt
NT seq
+upstream
nt +downstream
nt
atgggggtcatgactcggctattggcaggcctcttcctggctctgcttgcccttccggcc
gaaggtggcgtcctcaagaaagtcatccggcacaagcgacagagcgggatgaatgtcacc
ctgccagaggaaaaccagccggtggtgtttaatcacgtctacaatatcaagctgcccgtg
gggtcccagtgttcagtggatctagaatctgccagcggggagaaagacctggccccacca
tcagagcccagggaaagcttccaggagcacacggtggacggggaaaaccagatcgtcttc
actcaccgcatcaacatcccccgccgggcctgtggctgcgcggctgctcctgacgtcaag
gagcttctgagcagactggaggagctggagaacctggtgtcttccctgcgcgaacagtgc
acctcgggagcaggctgctgcctccagtctgccgaaggccgcgtggacaccaggcccttc
tgcagcggacggggcaacttcagcacggaaggctgcggttgcgtgtgcgaacccggctgg
aaaggccccaactgctctgagcccgagtgcccgagcaactgtcacctgcgtggccagtgc
ctggacggccagtgcgtgtgcgacgagggcttcaccggcgaggactgcggccagctggcc
tgtcccagcgactgcaacgaccagggcaagtgcgtggacggggcctgcgtctgcttcgaa
ggctactccgggctcgactgcagccgggagacctgcccagtgccctgcagcgaagagcac
ggccgctgcgtggacggccgctgcgtgtgccaggagggcttcgcgggcgaggactgcagg
gagcccttgtgtctgcacaactgccacggccgtgggcgctgcgtggagaacgagtgcgtg
tgcgatgagggcttcacgggcgacgactgtggggagctcgtctgccccaacgactgcttc
gaccgcggccgctgcctcaacggcacctgctcctgcgacgagggcttcacgggcgaggac
tgcggccagctcgcctgcccccactcctgccacggccgcggccgctgtgacgagggccag
tgcgtgtgcgacgagggcttcgcgggcccggactgcagcgagcggcgctgcccctccgac
tgccacgagcgcggccgctgcgtggacgggcgctgcgagtgcaacgacggcttcacgggc
gcggactgcggagagctgcggtgtccccgcgactgcagcggccacggacgctgcgtgaac
gggcagtgcgtgtgcgacgagggccacaccggcgaggactgcgggcagcggcggtgcccc
ggcgactgccacggccgcgggcgctgcgtggatgggcgctgcgagtgccagcccggcttc
cagggcgacgactgcagcgagatgagctgcccgcacgactgccaccagcacgggcgctgc
gtgaacggcatgtgtgtgtgcgacgacgcctacacgggcgaggactgccgcgagctccgc
tgcccccgggactgcagccagcgcggccgctgcgtggacgggcgctgcgtgtgcgaggac
ggcttcgccggccccgactgcgcggacctcgcctgtcccggagactgccacggccgcggg
cgctgcgtggatggccagtgcgtgtgcctcgagggcttcaccgggcccgactgtgcgcag
cgcaggtgtcccggcgactgtcacggccagggccgctgcgtggacggccagtgcgtgtgc
cacgagggcttcactgggcccgattgcgcgcagcgctcctgccccaacgactgcagcaac
tgggggcagtgcgtctctggccgctgcatttgcaatgagggctacaccggggaagactgc
tcccaggtatcccctcccaaagacctcatcgtgacagaagtgacggaagagactgtaaac
ctggcctgggacaatgagatgcgggtcacagagtacctcatcgtgtacacgcccacccac
gaggatggcctggaaatgcagttccgggtccctggagaccagacgtccgccaccatccgg
gaactggagcctggtgtggagtacttcatccgcgtgttcgccatcctggagaacaagaag
agcattcctgtcagcgccagggtggccacctacctgcctacacctgaaggtctaaaattc
aagtccatcaaggagacatctgtggaagtggagtgggatcctctggacatcgcttttgaa
gcatgggaggtcatcttccggaatacgaataaagatgatgaggaagagatcaccaagagc
ctgcggaggccggagaccacctaccggcaaactggcctggcccccgggcaggaatatgag
atatccttgcacatcgtgaaaaacaacacccggggcccgggcctgaagagagtgaccact
acccgcttggacgcccccagccagattgaagtgaaagatgtcacagacaccaccgctctg
atcacgtggtccaagcccctggccgagatcgatagcattgagctcacgtacgggatcaaa
gacgtgccaggagatcgcaccagcattgacctcacacacgaggagaaccagtactccatt
gggaacctgaagccggacaccgagtacgaggtggccctcatctcccacagggccgacatg
gccagcaaccccgccaaagagaccttcacgacaggcctggatgctcccaggaatctccgt
cgcatctcccaaacagacaacagcatcactctggagtggaggaacgtcaaggcggctgcc
gacagttacagaatcaagtacgcacccatctctggaggtgaccatgccgaggtagaagtc
cccaggagccaacagactacaaccagaaccacactcacagggctgaggccaggaactgaa
tatgggattggagtgtctgctgtgaagggggacaaggagagtgacccagccaccatcaat
gcggccacagagttggacacacccaaggaccttcgggtttctgaacctacggagaccagc
ctgaccctcctctggcggacgccggtggccaagtttgaccgttaccgcctcaactacagt
cttccctcgggccagcctgtggaggtgcagctccccagagacaccacctcccacgtcctg
agaggcctggaacctgggcgggaatacaccgtcctgctcacagcagagaaaggcagacac
aagagcaagccggcacgggtacaggcgtccacagaccacacccctgaactggaaaacctc
actgtgaccgaggctggctgggatggcctcagactcaactggaccgcagcggaccaggcc
tacgagcactttgtcattcaggtgcaggaggccgacggggtagaggcggctcggaacctc
acggtgcccggcagcctgcgggctgtggacgtcccgggcctgaaggccgccaccccttac
agagtcaccatccacggggtgatccggggctataggaccccagtgctctctgctgaggcc
tccacaggagacactccccacttgggagaggtcacggtgtccgaggtgggctgggaggcc
ctcagactcaactggacggctccggaaggagtctacgagcagtttctcattcaggtgcag
gagcctggcacagaggaggcagcccggaacctcactgtccctggagggctgaggtccgtg
gacctgcctgggctcaaggcagccactccctatagcatcaccatccgcggggtcactcgg
gacttcagcacagcccctctctctgttgaagttttaacagaggaggctccaggtctgggg
aacctcacagtggccgaggttagctgggatgccctccgactgcactggaccagccccgat
gggatctatgagcagtttgtcgttaagatccgggagactgaccagccccgagaagttcac
agtctcacggttcctggcagccagcacaccgtggagattccaggcctcaaagctggtacc
tcttacacaatcaccctgctcggcaaggtcagggaccgcagcactcaaccccttgctgtg
gaggtcattacagcggagctcccccagctgggagacttagtcgtgaccgaggctggctgg
gatggcctcagactcaactggaccgcagcggaccaggcctttgagcactttgtcattcag
gtgcaggaggccaacggggtggaggcggctcagaacctcacggtgcccggcagcctgcgg
gcagcggacgtcccaggcctgaaggccgccaccccttacagagtcaccatccacggggtg
atccggggctataggacgccagtgctctctgctgaggcctccacagccggagaacctgaa
cttggaaacttaagtgtttccgacatcacttctgagagtttcaatctctcctggaccgct
actgatggtgccttcgagacctttaccgttgaaattattgattccaataggttcctggag
accatggaatataacgtctctggtgctgaacgaacagcccacatctcagggctccgccct
agtaatgattttattgtctacctctctggactcgctcccagcatgcagaccaaaaccatc
agtgccacggccactacagtagctgaacctctccttagccacctcactgtctcaaatgtg
acttcaggcagtgtggccatctcatggaaagctcaggagtctgcctttgatagcttcctt
gtagaagttaggaattctgaccccctccaggagatggtggtccattctctgcctgcggca
tctcgcagctttgtcatcaccaacctcaaagcttcttctgattacactgcccacctccac
gggctgattggcaggcagcatgctcagaccctgatggcccaagcaaccacagaggccctg
ccccttctggaaaacctaaccatttccgacattaatccctacgggttcacagtttcctgg
atggcatcggagaatgcctttgacagcttcctagtcacggtggtggattctgggaagctg
ctggacccccaggaattcaccctttcaggaacccagaggaagctggagctcagaggcctt
ataactggcattggctatgaggtcatggtctctggcttcacccaagggcaccaaaccaag
cccttgagggctgagattattacagaagccgagccggaagttgacaaccttctggtttca
gatgccaccccagatggtttccgtctgtcctggacagctgatgaaggagtcttcgacagt
tttgttctcaaaatcagagataccaaaaagcagtccgagccactggagataaccctactt
gcccctgaacgaaccagggacataacaggtctcagagaggccactgaatatgaaattgag
ctctatggaataagcagtggaaggcgatcccagccagtcactgccatagcaacaacagcc
atgggctccccgaaggaaatcattttctcagacatcactgaaacctcggccactgtcagc
tggatggcacccactacccaggtggagagcttccggatcacctatgtgcccattgcagga
ggttcgccctcagcggtgactgtggatgggaccaagacccagaccaggctgctgagactc
ctacctggagcggattacctggtcagcgtcatcgccctgaagggctttgaggaaagcgag
cctgtctcagggacgctcaccacagctctggatggcccatctagcttggtgacagccaac
atcactgactcagaagccttggccatgtggcagccagccatcgcccctgtggataattat
gtcatctcctacacaggcgagagagtgccagaaattacccgcacggtgtccgggaacacg
gtggagtatgcactgaccaatcttgaacctgccacggaatacacgctgaggatctttgca
gagaaagggccccagaagagctcaaccatcaccaccaagttcaccacagacctcgattct
ccaagagacttcactgctacggaggttcagtcggaaactgccctcctcacctggagacct
ccccgggcatctgtcactggttacttattggtgtatgaatccgtggatggtacaatcaag
gaagtcgttgtggatccagataccacctcttacagcctgactgatctgagcccatccacc
cactacacagccaggattcaggcactgaatgggaccctgaggagcaagacagtcaagacc
atcttcaccacgactggagtcctgtaccgattccccagggactgctcccaggcaatgctg
aacggagacaccacctctggcgtctacaccatttatctgaacaacaacaagacccagaag
caggaagtcttctgtgacatgacctctgatgggggtggatggatcgtgttcctgagacgc
aaaaacggacgtgaggacttctatcgaaactggaaggcctatactgctggatttggggac
ctaagagaagagttctggcttgggctggacactttgagcaaaatcacagcccaggggcag
tacgagctccgggtggacctgcgcgaccacgggcagtcggcctacgccgtctacgacaag
ttcagcgtgggcgactcccggacgcgctaccggctgaaggtggaggggtacagcggcaca
gcaggtgactccatggcctaccacaacggccggtccttctccaccttcgacaaggacaca
gactcggccatcaccaactgtgccctgtcctacaagggggctttctggtacaagaactgc
caccgcgtcaacctgatggggagatacggggacaacagccacagtcagggtgttaactgg
ttccactggaagggccacgagcattcaatccagtttgctgagatgaagctgagacccagc
aacttccgaaacctcgaaggcaggcgcaaaagggcataa
DBGET
integrated database retrieval system
