Odocoileus virginianus (white-tailed deer): 110125625
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Entry
110125625 CDS
T10722
Symbol
PAPOLB
Name
(RefSeq) poly(A) polymerase beta
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110125625 (PAPOLB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovr03019
]
110125625 (PAPOLB)
Enzymes [BR:
ovr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
110125625 (PAPOLB)
Messenger RNA biogenesis [BR:
ovr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
110125625 (PAPOLB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
110125625
NCBI-ProteinID:
XP_020730379
UniProt:
A0A6J0W3B9
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All DBs
Position
33:37580413..37584760
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AA seq
642 aa
AA seq
DB search
MMPFPVTTLGPQRTPPPPKHYGISSPISLAPPRETDCILTQKLIETLKPFGVFEEEEELQ
RRILILEKLNNLVKEWIREISESKSLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCV
APRHVDRSDFFTSFYDKLKLHEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIP
EDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSN
ILGFLGGVSWAMLVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPV
WDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWS
KLFEAPSFFQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQ
SFPAPKESPDKEEFRTMWVIGLVLKKPENSEVLSIDLTYDIQSFTDTVYRQAINSKMFEM
DMKIAAMHLKRKELHQLLPNHVLQKKKTLSTEGVRLTALDDGSLDLSVDGENSTPVSSLP
AASKTGRVTGSTQGRNSPAPAAAAASVTGVQFPEVSSQQANPSDSPGGLPSESIPQTASQ
PAVPPAPKPTVTRVVSSARLVSHPPRPSGSAAASIANPIVGV
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgatgccgtttccggtgaccaccctgggaccacagcggaccccgccgccgcccaagcac
tacggcatctcttcccccatcagtttagcaccccccagggagactgactgcatacttacc
cagaaattaattgaaactctgaagcccttcggggtttttgaagaggaagaggaactgcag
cgcaggattttaattttggagaaattaaataatctggtaaaggaatggatacgagaaatc
agtgaaagcaagagtcttccacaagctgtaattgaaaatgttggagggaaaatctttaca
tttggttcttacaggttaggggtgcatacgaaaggtgcagatatcgatgcgttgtgcgtg
gcaccgagacacgttgatcgaagcgactttttcacctccttctatgataaattgaaacta
catgaagaagtaaaggatttaagggctgttgaggaggcatttgtaccggttatcaaactg
tgtttcgatgggatagagattgatattttgtttgcaagattagcactgcagactattcct
gaagatttggacctaagagatgacagtctgcttaaaaacttagatataagatgcataaga
agccttaatggttgccgggtaactgatgagattttacatctagtaccaaacattgacaac
ttcagattaactctgagagccatcaagctgtgggccaaatgtcacaatatttattccaat
atactaggtttcctcgggggtgtttcctgggcgatgctagtagcaagaacttgccagctt
tatccaaatgccatagcatcaactcttgtccgtaaatttttcttggtgttttctgagtgg
gaatggccaaatccagtgctactgaaagagccggaagaacggaatctgaatttgcctgtt
tgggacccaagagtaaatcccagtgataggtaccatctcatgcccataattacaccagca
tacccgcagcagaactcgacatacaacgtgtctgtttcaacgcggatggtcatgattgag
gagtttaagcaagggcttgctatcacacatgagattttgctgagtaaggcagagtggtcc
aaactttttgaagcacccagcttcttccagaagtacaaacattatattgtgcttctggca
agtgcgccaacagagaaacaacatctagagtgggtgggcttggtggaatcaaaaatccga
atcctggttggaagcttggagaagaatgaatttattacactggctcatgtgaatcctcag
tcgtttccagcacccaaggagagtcctgacaaggaagaatttcgtacaatgtgggtgatt
gggttagtgttaaaaaagccagaaaactctgaagttctcagtattgacctcacctatgat
atccagtctttcacagacactgtgtataggcaagcgataaatagtaaaatgtttgagatg
gacatgaaaattgctgcaatgcatttgaaaagaaaggaacttcatcaactactgcctaat
catgtgcttcagaaaaagaaaacactttcgacagaaggtgtcagattgacagccttggat
gacggcagccttgacttgtctgtcgacggtgagaacagcacgcctgtgtcatcacttcct
gccgcttcgaagactggccgagtgactggcagcactcaaggcagaaacagtcctgccccg
gctgcggcggcagcatctgtgactggtgtacagtttcctgaagtttcctctcagcaagca
aatcccagtgacagccctgggggcctgcccagtgaaagcatccctcagaccgcttcacag
ccagctgttcctccggcaccgaagcccacggtcaccagagttgtttcctcggcacggctg
gtcagccatccacccaggccttctgggagcgcagcagcaagcatagcaaatcctatcgta
ggagtctag
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