Odocoileus virginianus (white-tailed deer): 110126093
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Entry
110126093 CDS
T10722
Symbol
RAPGEF1
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04015
Rap1 signaling pathway
ovr04510
Focal adhesion
ovr04722
Neurotrophin signaling pathway
ovr04910
Insulin signaling pathway
ovr05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
110126093 (RAPGEF1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110126093 (RAPGEF1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
110126093 (RAPGEF1)
09156 Nervous system
04722 Neurotrophin signaling pathway
110126093 (RAPGEF1)
09160 Human Diseases
09162 Cancer: specific types
05211 Renal cell carcinoma
110126093 (RAPGEF1)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
110126093
NCBI-ProteinID:
XP_070310932
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Position
2:complement(96846622..96980345)
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AA seq
1263 aa
AA seq
DB search
MSGGLGLRRSPEMSGKIEKADSQRSHLSSFTMKLKDKFHSPKIKRTPSKKGKPAEVSVKI
PEKPMNKEATDRFLPEGYPIPLDLEQQAVEFMSTSAVASRSQRQKNLSWLEEKEKEVVSA
LRYFKTIVDKMAIDKKVLEMLPGSASKVLEAILPLVQSDPRIQHSSALSSCYSRVYQSLA
NLIRWSDQVMLEGVNSEDKEMVTTVKGVIKAVLDGVKELVRLTIEKQGHPSPTSPVKPSS
PACKPDSQSELPLTDREMEILNKTTGLSQSTEGLPDSMDEEVAPPKPPLPGIRVVDNSPP
PALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPVGINRQDFDVDCYAQRRLSGGSHSYSG
ESPRLSPCSSIGKLSKSDEQLSSLDRDSGQCSRNTSCETLDHYDPDYEFLQQDLSNADQI
PQQVACNLSPLPESLGESGSPFLGHPLQLPLGSCPQPDGSSAPGQQTDVPPALPEKKRRS
AASQTLDSSGCRASYERHPSQYDNISEDDLQNPASVQSVPFTPFAAILPFQQGGSSAPVD
FVGDFTVSESTGDPEKPPPLPEKKNKHMLAYMQLLEDYSEPQPSMFYQTPQKEHVYQQKN
KLLMEVYGFNDSFSAGDAPHELAPPPALPPKQRQLASYAASSFSSVSYCVQQTKVAFTPE
DGSAGQGISVSVSNSFLSRHGSLPVPSYKSVFRSYSQDFVPHSQASVQPFLPSTSSSSPH
FPPVHQSQSSDLAVPPVASLPPSTLDGLLSSSQESSFHGNTVCLPSETSFTDSPQTPSSK
HACEGDYVSLYCSGQSVEELARPRGESPAAKDGHSRDTTSAGCVPGKEGRDSGDRALKSP
DAPEAQSEEEVDELSLIDHNEIMARLTLKQEGDDGPDVRGGSGDILLVHATETDRKDLVL
YCEAFLTTYRTFITPEELIKKLQYRYEKFSPFADTFKKRVSKNTFFVLVRVVDELCLVEL
TEEILKLLMELVFRLVRSGELSLARVLRKNILDKVDQKKLLRCANSDQPLAARGVAARPG
TLHDFHSHEIAEQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVR
SIIMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGL
AEYCTLIDSSSSFRAYRAALSEVEPPCIPYLGLILQDLTFVHLGNPDYIDGKVNFSKRWQ
QFNILDSMRCFQQVHYDIRRNDDIINFFNDFSDHLAEEALWELSLKIKPRNITRRKTDRE
EKT
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcggcctcggcctccggcgcagcccggaaatgtccggcaagatcgagaaagca
gactctcagcgttctcatctctcctccttcaccatgaagctgaaggacaaattccactcg
cccaaaatcaagagaacgccatcaaagaagggaaaaccagccgaggtgtctgtgaagatt
ccagagaagcccatgaacaaagaggcaacagacagatttctaccagagggctaccctatc
cccttggatctggagcagcaggcagtagagtttatgtccaccagtgctgtggcttccagg
tctcaaaggcagaagaacctgagctggctggaggagaaagagaaggaagttgtcagtgcc
ttgcgctactttaagaccattgtggacaaaatggccattgataagaaggtcctggagatg
ctcccagggtctgccagcaaggtgctggaggccatcttacccctggtgcagagcgaccct
cggattcagcacagctcagccctctcctcctgctacagccgagtgtaccaaagtctcgcc
aacctcatccgttggtctgaccaagtgatgctggaaggcgtgaactcagaagataaagag
atggtgacaactgtgaagggggtcatcaaggccgtgctggacggagtaaaggagctggtc
agactcaccatcgagaagcaggggcatccgtctccaacaagccccgtgaaacccagctcc
ccagcctgcaaacctgacagccagtctgagctccccctgacagatcgagagatggagatt
ctaaacaagacaaccggcctgtcacagtcgaccgaggggctcccagactctatggacgaa
gaggttgcaccccccaagccccccttacctggcattagggtggttgataacagtcctcca
ccagcactgcccccgaagaagagacagtcggctccatcccccacccgcgtggccgttgtg
gcccccatgagtcgagccaccagcggctccagtttgcctgttggaattaataggcaggac
tttgacgtggactgttatgcacagagacggctgtcgggaggcagccactcgtacagcggt
gagtctccccgcctgtcgccctgcagcagtatcggcaagctcagcaagtcggatgagcag
ctgtcctctctggacagggacagcgggcagtgctcccggaacacaagctgtgaaacacta
gatcattacgatcctgactacgagttccttcagcaagacctctccaatgcagaccagata
cctcagcaagtggcctgtaacctcagcccgctgccggagtccttgggggagtctgggtct
ccatttctcggccatcctctccagctgcctctgggcagctgtccccagccagatgggtcc
tcggcgcccgggcagcagacggacgtgccaccggccctgcctgagaagaagcgcaggagt
gcggcctcccagaccttggacagctctggctgccgggcgtcctacgagcgacacccctcg
cagtacgacaacatctccgaggatgacctgcagaacccagcctccgtccagtccgtcccc
ttcacgccctttgctgctattcttccctttcagcaaggaggttcctcagcccctgtcgac
ttcgtgggtgatttcactgtttctgaatcaacgggtgacccagaaaaaccgccgcctctc
cctgagaagaaaaacaaacacatgctggcctacatgcagctgcttgaggactactcagag
ccgcagccctccatgttctaccagacgccgcagaaggagcacgtgtaccagcagaagaac
aagctgctcatggaggtgtacggcttcaacgactccttcagcgctggcgacgccccgcac
gagcttgccccgccccccgcgctgccccccaagcagcggcagctggcctcctatgctgct
tcttccttctcctctgtctcctactgtgtccagcaaactaaagtggccttcacccccgag
gacggcagtgccggtcagggcatcagtgtgtccgtctctaactcctttctcagccggcac
ggcagcttacctgtgccctcgtacaagtccgtgtttaggtcctactcgcaggatttcgtg
cctcacagccaagcttccgtccagcctttccttccgtctacctcctcttcctctccacac
ttcccacctgtccaccagtctcagagctctgacttagccgtgccgcctgtggccagtctg
cctcccagcaccctggacgggcttctctcgtcttctcaggagagcagctttcacgggaac
actgtctgccttccttccgaaacttctttcactgactcgccccagacgccttcgagcaag
cacgcctgtgagggggactacgtcagtctgtattgctctggccagagcgtcgaggagctg
gcccgccctcgaggagagtcacctgcggcgaaggacggacactccagagacaccacgtcg
gccggctgtgtgcccgggaaggagggcagggacagcggggacagggccctgaagtcgcca
gacgctccagaggctcagtccgaagaggaggtggacgagctgtccctcatcgaccacaat
gaaatcatggcgaggctgaccctcaagcaagagggcgacgacgggccagacgtccgtgga
gggtcgggcgacatcctcctcgtccacgccacagagacggacaggaaagatctggtgttg
tactgcgaggccttcctgaccacctacaggaccttcatcacgcccgaggagctcatcaag
aagctgcagtacaggtatgagaagttctctcctttcgccgacacgttcaagaagcgtgtg
agcaagaacacgtttttcgtgctggtgcgggtggtagacgagctctgcctggtggagctg
acagaagagatcctgaagctgctgatggagctggtcttccgcctggtgcgcagcggggaa
ctcagtctggcacgcgtgctccgcaagaacattctggacaaggtcgatcagaagaagctg
ctccggtgtgccaactccgaccagcccctggcggcccggggcgtggcagccaggcccggg
accttgcatgacttccacagccatgaaatagccgagcagctgactctgctagatgccgag
ctcttttataaaatagagattcctgaggttttgctttgggccaaagagcagaacgaggag
aagagcccgaacctgacccagttcacggagcacttcaacaacatgtcctactgggtccgg
tcgataatcatgttgcaggaaaaggcccaagacagggaacggctgctcttgaagttcatc
aagatcatgaagcacttacggaagctgaacaacttcaactcctacctggccatcctctcg
gcgctggactcagcccccatccgcaggctggagtggcagaagcagacctcagagggcctg
gctgagtactgcacgcttatcgacagctcgtcctccttccgtgcctaccgggccgccctc
tcggaggtggagccaccctgcatcccttacctggggctcatcctgcaggacctcaccttc
gtccacctggggaacccagactatatcgacgggaaggtgaacttctccaaacgctggcag
cagttcaacatcctggacagcatgcggtgcttccagcaagtgcactatgacatccggaga
aatgacgacatcattaacttcttcaacgacttcagtgaccacctggctgaggaggcccta
tgggaactctctctgaaaatcaaacccaggaacataaccaggaggaagacagacagagaa
gagaagacctag
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