Odocoileus virginianus (white-tailed deer): 110126346
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Entry
110126346 CDS
T10722
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110126346 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovr03019
]
110126346 (CPSF2)
Messenger RNA biogenesis [BR:
ovr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
110126346 (CPSF2)
U7-dependent histone pre-mRNA processing factors
110126346 (CPSF2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
110126346
NCBI-ProteinID:
XP_020731625
UniProt:
A0A6J0W5N0
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Position
16:complement(19410862..19457275)
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AA seq
782 aa
AA seq
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MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLL
SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTT
PGTLARFLIDNPSEKVTEIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDAEEDIDQPSAHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDVPTKCISTTESIEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDS
EMQVDAPSDSSVIAQQKAMKSLFGDDEKETGEESEIIPTLEPLPPHEVPGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacatctattatcaaattaaccaccctttctggggtccaagaagaatctgctctttgc
tatcttctccaagtcgacgagtttagatttttattggactgtggctgggatgagcacttt
tctatggatattatagattccctgaggaagcatgttcaccagattgatgcagtcttgttg
tctcatcccgaccccctccatcttggcgccctcccctatgctgttggaaagttgggtctg
aactgcgccatctatgcaaccattcccgtttataaaatgggacagatgttcatgtatgac
ctttatcagtcccgacacaatacagaagattttacgctctttaccctagatgatgtggat
gcagcctttgataagatacaacagttaaaattctctcagattgtgaatttgaaaggtaaa
ggacatggcttgtctatcacacctctgccagctggtcatatgataggtggaacaatatgg
aaaatagtcaaagatggagaagaagaaattgtttatgcagttgacttcaaccacaagagg
gagatccacttaaatggatgttccctggaaatgctaagcagaccctccttacttatcaca
gactcatttaatgctacctatgtgcagcccaggagaaaacaaagagatgagcagcttctg
acaaatgtcctggaaacacttcgaggtgatggaaacgtattaatagcagtggacactgca
ggcagagttctggaacttgctcaactccttgatcagatttggagaactaaagatgctgga
ttgggtgtttactcattggcactcctcaataatgtcagttataatgtggtggagttttct
aagtcccaggtagaatggatgagtgataagttgatgaggtgttttgaagacaaaagaaat
aatccatttcagtttcgtcatctctctctatgtcatggtctttctgacttggctcgagta
cctagccctaaagttgtacttgccagccagcctgacctggaatgtggattttcaagggat
ctctttattcagtggtgccaggaccctaaaaactcgatcattctaacttacagaactact
cctgggactttagcacgtttcctaattgataatccttctgaaaaagttacagaaatagag
ttgaggaaacgtgtgaaacttgaagggaaagaacttgaagaatacttggaaaaagagaaa
ctaaagaaagaagctgctaaaaagctcgagcagtcaaaagaggcagacatagattccagt
gatgaaagtgatgctgaggaagatattgaccagccctcagcacataagaccaagcatgac
ctgatgatgaaaggtgaaggcagtcgcaaaggaagtttcttcaagcaggctaaaaagtct
tatcctatgtttcctgccccagaagaaagaattaaatgggatgaatatggagaaattatc
aaaccagaggatttcttagtgccagaacttcaagctactgaagaagaaaaaagcaaatta
gagtctggcctgacaaatggagatgaacccatggatcaggatttatctgatgttcctact
aagtgtatttctacaacagaatctattgaaataaaagccagggttacttacatagactat
gaaggacgctctgatggggattccattaaaaagatcatcaatcagatgaaaccacgccag
ttaatcattgtccatggaccgccagaagccagtcaggatcttgcagagtgctgtcgtgca
ttcggtgggaaagatattaaagtatacatgccaaagctgcacgaaacagtcgatgccact
agtgaaactcacatctaccaggtgagattaaaagattcacttgtcagctcccttcagttt
tgtaaggcaaaagatgctgaactagcttggatagatggtgtcttagacatgagagtttcc
aaagtggacacaggagttattttagaagaaggagaactaaaggatgatggcgaagactcc
gaaatgcaggtggatgcgccttcagattctagtgtcatagcacagcagaaggccatgaaa
agtctgttcggagacgatgagaaagaaacgggtgaagaaagtgagatcattcctactctg
gaacccttaccgcctcatgaggttcctggacatcagtctgtttttatgaatgaaccaaga
ctgtcggacttcaaacaagttcttttacgggaggggatccaagctgaattcgtaggaggc
gtgcttgtttgcaacaatcaagtggcagtccgtagaacggaaactggacgcattggatta
gaaggctgcctttgtcaagatttttataggataagagaccttttatatgaacagtatgcc
attgtgtaa
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